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CmoCh11G004100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G004100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr11:2017679..2018074
RNA-Seq ExpressionCmoCh11G004100
SyntenyCmoCh11G004100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058314.1 hypothetical protein E6C27_scaffold274G006480 [Cucumis melo var. makuwa]5.7e-3061.19Show/hide
Query:  MGGKRAVHYYEMTELEVPLSCNKPKLGKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIF
        MGGKRA+H     +L VPL C+KP       K+ STN+ G EKT TTV K E+ GG +V+ SKR KVKEFVD NTGRLSSKEEVTYK S KVD+   G  
Subjt:  MGGKRAVHYYEMTELEVPLSCNKPKLGKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIF

Query:  NEVQTQVKFNKA-PSS--SNNSTKPTNKHIMFDF
        +EVQTQVKF K  P+S  +N+S K TNKHIMFDF
Subjt:  NEVQTQVKFNKA-PSS--SNNSTKPTNKHIMFDF

KAF3944350.1 hypothetical protein CMV_029177 [Castanea mollissima]4.7e-0841.12Show/hide
Query:  GKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIFNEVQTQVKFNKA--PSSSNNSTKPT-
        G    KR        EK++  +YK++  G  + Q +K HK +EFVD ++GRL  KE+VTYKS+ KV++ VQG   E +TQVKF K   P+ S + +K   
Subjt:  GKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIFNEVQTQVKFNKA--PSSSNNSTKPT-

Query:  NKHIMFD
        N  I +D
Subjt:  NKHIMFD

KAG6587772.1 hypothetical protein SDJN03_16337, partial [Cucurbita argyrosperma subsp. sororia]4.6e-6496.95Show/hide
Query:  MGGKRAVHYYEMTELEVPLSCNKPKLGKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIF
        MGGKRAVHYYEMTELEVPLSCNKPKL KPGAKRASTNR GAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNN+GRLSSKEEVTYKSSFKVDNAVQGIF
Subjt:  MGGKRAVHYYEMTELEVPLSCNKPKLGKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIF

Query:  NEVQTQVKFNKAPSSSNNSTKPTNKHIMFDF
        NEVQTQVKF KAPSSSNNSTKPTNKHIMFDF
Subjt:  NEVQTQVKFNKAPSSSNNSTKPTNKHIMFDF

TYK09494.1 hypothetical protein E5676_scaffold499G00950 [Cucumis melo var. makuwa]2.8e-2960.45Show/hide
Query:  MGGKRAVHYYEMTELEVPLSCNKPKLGKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIF
        MGGKRA+H     +L VPL C+KP       K+ STN+ G EKT TTV K E+ GG +V+ SKR KVKEFVD NTGRLSSKEEVTYK S KVD+   G  
Subjt:  MGGKRAVHYYEMTELEVPLSCNKPKLGKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIF

Query:  NEVQTQVKFNKA-PSS--SNNSTKPTNKHIMFDF
        +EVQTQVKF K  P+S  +N+S K TNKHIM DF
Subjt:  NEVQTQVKFNKA-PSS--SNNSTKPTNKHIMFDF

XP_030956139.1 uncharacterized protein LOC115978256 [Quercus lobata]6.1e-0840Show/hide
Query:  GKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIFNEVQTQVKFNKAPSSSNNSTKPT-NK
        G    KR        EK++ T+YK++     + Q +K HK +EFVD ++GRL  KE+VTYKS+ KV++ VQG   E +TQVKF K      +++K   N 
Subjt:  GKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIFNEVQTQVKFNKAPSSSNNSTKPT-NK

Query:  HIMFD
         I +D
Subjt:  HIMFD

TrEMBL top hitse value%identityAlignment
A0A2N9HDM1 Uncharacterized protein3.1e-0535Show/hide
Query:  GAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIFNEVQTQVKFNKAPSSSNNSTKPTNKHIMF
        G+KR     +  + ++ T+YK+    G +   S +HK +EFVD ++GRL  KEEV + S+ KV + VQ    E +TQV+F K    +  + K  N  I +
Subjt:  GAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIFNEVQTQVKFNKAPSSSNNSTKPTNKHIMF

A0A5A7UT05 Uncharacterized protein2.8e-3061.19Show/hide
Query:  MGGKRAVHYYEMTELEVPLSCNKPKLGKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIF
        MGGKRA+H     +L VPL C+KP       K+ STN+ G EKT TTV K E+ GG +V+ SKR KVKEFVD NTGRLSSKEEVTYK S KVD+   G  
Subjt:  MGGKRAVHYYEMTELEVPLSCNKPKLGKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIF

Query:  NEVQTQVKFNKA-PSS--SNNSTKPTNKHIMFDF
        +EVQTQVKF K  P+S  +N+S K TNKHIMFDF
Subjt:  NEVQTQVKFNKA-PSS--SNNSTKPTNKHIMFDF

A0A5D3CE69 Uncharacterized protein1.4e-2960.45Show/hide
Query:  MGGKRAVHYYEMTELEVPLSCNKPKLGKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIF
        MGGKRA+H     +L VPL C+KP       K+ STN+ G EKT TTV K E+ GG +V+ SKR KVKEFVD NTGRLSSKEEVTYK S KVD+   G  
Subjt:  MGGKRAVHYYEMTELEVPLSCNKPKLGKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIF

Query:  NEVQTQVKFNKA-PSS--SNNSTKPTNKHIMFDF
        +EVQTQVKF K  P+S  +N+S K TNKHIM DF
Subjt:  NEVQTQVKFNKA-PSS--SNNSTKPTNKHIMFDF

A0A7N2KV08 Uncharacterized protein3.0e-0840Show/hide
Query:  GKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIFNEVQTQVKFNKAPSSSNNSTKPT-NK
        G    KR        EK++ T+YK++     + Q +K HK +EFVD ++GRL  KE+VTYKS+ KV++ VQG   E +TQVKF K      +++K   N 
Subjt:  GKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIFNEVQTQVKFNKAPSSSNNSTKPT-NK

Query:  HIMFD
         I +D
Subjt:  HIMFD

A0A7N2R0B6 Uncharacterized protein2.8e-0636.08Show/hide
Query:  AKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIFNEVQTQVKFNKAPSSSNNSTKPTNKHI
        +KR        + ++  +YK+    G + + +++HK +EFVD ++GRL  KEE+ Y S+ KV++ VQG   E +TQVKF K    + +++K  NK I
Subjt:  AKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIFNEVQTQVKFNKAPSSSNNSTKPTNKHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAAAACGAGCGGTTCATTACTATGAGATGACGGAACTGGAAGTTCCTTTGAGTTGCAACAAACCCAAGTTGGGCAAGCCCGGCGCCAAAAGAGCCTCCACCAA
TCGACATGGGGCGGAGAAAACTACAACCACGGTCTACAAAAATGAACTTCCTGGTGGTTTAACTGTACAGGTCTCCAAGAGGCATAAGGTCAAGGAATTTGTGGACAACA
ACACCGGACGTTTGAGTTCCAAAGAAGAGGTTACTTATAAGTCTAGTTTCAAAGTGGATAATGCAGTTCAAGGAATTTTCAATGAGGTTCAAACTCAAGTGAAGTTTAAC
AAGGCTCCAAGTTCTAGCAACAATTCCACCAAACCCACTAATAAGCATATCATGTTTGACTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGAAAACGAGCGGTTCATTACTATGAGATGACGGAACTGGAAGTTCCTTTGAGTTGCAACAAACCCAAGTTGGGCAAGCCCGGCGCCAAAAGAGCCTCCACCAA
TCGACATGGGGCGGAGAAAACTACAACCACGGTCTACAAAAATGAACTTCCTGGTGGTTTAACTGTACAGGTCTCCAAGAGGCATAAGGTCAAGGAATTTGTGGACAACA
ACACCGGACGTTTGAGTTCCAAAGAAGAGGTTACTTATAAGTCTAGTTTCAAAGTGGATAATGCAGTTCAAGGAATTTTCAATGAGGTTCAAACTCAAGTGAAGTTTAAC
AAGGCTCCAAGTTCTAGCAACAATTCCACCAAACCCACTAATAAGCATATCATGTTTGACTTCTAG
Protein sequenceShow/hide protein sequence
MGGKRAVHYYEMTELEVPLSCNKPKLGKPGAKRASTNRHGAEKTTTTVYKNELPGGLTVQVSKRHKVKEFVDNNTGRLSSKEEVTYKSSFKVDNAVQGIFNEVQTQVKFN
KAPSSSNNSTKPTNKHIMFDF