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CmoCh11G004360 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G004360
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionhistone-lysine N-methyltransferase ASHR3
Genome locationCmo_Chr11:2141366..2144676
RNA-Seq ExpressionCmoCh11G004360
SyntenyCmoCh11G004360
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0010452 - histone H3-K36 methylation (biological process)
GO:0000785 - chromatin (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0046975 - histone methyltransferase activity (H3-K36 specific) (molecular function)
InterPro domainsIPR003616 - Post-SET domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587797.1 Histone-lysine N-methyltransferase ASHR3, partial [Cucurbita argyrosperma subsp. sororia]3.2e-4175.2Show/hide
Query:  RAQGGLTGLLYLFNGQHAVSVSDMEILHGHRKTVIIFFFLGQKMIIMLNHPILLKNNLCV-SDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVK
        +A G LTGLLYLFNGQHAVSVSDME                          ILLKNNL V SDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVK
Subjt:  RAQGGLTGLLYLFNGQHAVSVSDMEILHGHRKTVIIFFFLGQKMIIMLNHPILLKNNLCV-SDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVK

Query:  CHCGAPNCQRYLGTKKISALDLFWG
        CHCGAPNCQRYLGTKKISALDLFWG
Subjt:  CHCGAPNCQRYLGTKKISALDLFWG

KAG7035699.1 Histone-lysine N-methyltransferase ASHR3, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-5176.71Show/hide
Query:  LQMNARAQGGLTGLLYLFNGQHAVSVSDMEILHGHRKTVIIFFFLGQKMIIMLNHPILLKNNLCV-SDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQF
        L MNARAQG LTGLLYLFNGQHAVSVSDME                          ILLKNNL V SDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQF
Subjt:  LQMNARAQGGLTGLLYLFNGQHAVSVSDMEILHGHRKTVIIFFFLGQKMIIMLNHPILLKNNLCV-SDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQF

Query:  GPEVKCHCGAPNCQRYLGTKKISALDLFWGTKRRRTSAAHITGRFS
        GPEVKCHCGAPNCQRYLG+KK+SALDLFWGTKRRRTSAA ITGR S
Subjt:  GPEVKCHCGAPNCQRYLGTKKISALDLFWGTKRRRTSAAHITGRFS

XP_022922046.1 histone-lysine N-methyltransferase ASHR3-like isoform X1 [Cucurbita moschata]6.2e-3763.31Show/hide
Query:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITGRFSPTA------------
        N  +   QV GETRVGVFAARSIEVGEPLTY+YRFVQFGPEVKCHCGA NCQR+LG+KK I+A+DLFWGTKRRRTSAA IT                   
Subjt:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITGRFSPTA------------

Query:  -----VYLVLPLALPALHLQQIPSSKDHKLQSPVTSIKG
             ++L+LP  L  LHLQ IPSSK HKLQS V SI+G
Subjt:  -----VYLVLPLALPALHLQQIPSSKDHKLQSPVTSIKG

XP_022922047.1 histone-lysine N-methyltransferase ASHR3-like isoform X2 [Cucurbita moschata]2.3e-3972.95Show/hide
Query:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITGRFSPTAVYLVLPLALPAL
        N  +   QV GETRVGVFAARSIEVGEPLTY+YRFVQFGPEVKCHCGA NCQR+LG+KK I+A+DLFWGTKRRRTSAA IT   S   ++L+LP  L  L
Subjt:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITGRFSPTAVYLVLPLALPAL

Query:  HLQQIPSSKDHKLQSPVTSIKG
        HLQ IPSSK HKLQS V SI+G
Subjt:  HLQQIPSSKDHKLQSPVTSIKG

XP_022988562.1 histone-lysine N-methyltransferase ASHR3-like isoform X2 [Cucurbita maxima]3.0e-3972.13Show/hide
Query:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITGRFSPTAVYLVLPLALPAL
        N  +   QV GETRVGVFAARSIEVGEPLTY+YRFVQFGPEVKCHCGA NCQR+LG+KK I+A+DLFWGTKRRRTSAA IT   S   ++L+LP  L  L
Subjt:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITGRFSPTAVYLVLPLALPAL

Query:  HLQQIPSSKDHKLQSPVTSIKG
        HLQ IPSSK HKLQS + SI+G
Subjt:  HLQQIPSSKDHKLQSPVTSIKG

TrEMBL top hitse value%identityAlignment
A0A0A0LW85 Uncharacterized protein2.2e-3286.59Show/hide
Query:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITG
        N  +   QV GETRVGVFAARSIEVGEPLTY+YRFVQFGPEVKCHCGAPNCQRYLGTKK ISA+DLFWGTKRRRTSAA ITG
Subjt:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITG

A0A6J1E212 histone-lysine N-methyltransferase ASHR3-like isoform X21.1e-3972.95Show/hide
Query:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITGRFSPTAVYLVLPLALPAL
        N  +   QV GETRVGVFAARSIEVGEPLTY+YRFVQFGPEVKCHCGA NCQR+LG+KK I+A+DLFWGTKRRRTSAA IT   S   ++L+LP  L  L
Subjt:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITGRFSPTAVYLVLPLALPAL

Query:  HLQQIPSSKDHKLQSPVTSIKG
        HLQ IPSSK HKLQS V SI+G
Subjt:  HLQQIPSSKDHKLQSPVTSIKG

A0A6J1E322 histone-lysine N-methyltransferase ASHR3-like isoform X13.0e-3763.31Show/hide
Query:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITGRFSPTA------------
        N  +   QV GETRVGVFAARSIEVGEPLTY+YRFVQFGPEVKCHCGA NCQR+LG+KK I+A+DLFWGTKRRRTSAA IT                   
Subjt:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITGRFSPTA------------

Query:  -----VYLVLPLALPALHLQQIPSSKDHKLQSPVTSIKG
             ++L+LP  L  LHLQ IPSSK HKLQS V SI+G
Subjt:  -----VYLVLPLALPALHLQQIPSSKDHKLQSPVTSIKG

A0A6J1JDD2 histone-lysine N-methyltransferase ASHR3-like isoform X21.4e-3972.13Show/hide
Query:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITGRFSPTAVYLVLPLALPAL
        N  +   QV GETRVGVFAARSIEVGEPLTY+YRFVQFGPEVKCHCGA NCQR+LG+KK I+A+DLFWGTKRRRTSAA IT   S   ++L+LP  L  L
Subjt:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITGRFSPTAVYLVLPLALPAL

Query:  HLQQIPSSKDHKLQSPVTSIKG
        HLQ IPSSK HKLQS + SI+G
Subjt:  HLQQIPSSKDHKLQSPVTSIKG

A0A6J1JHJ5 histone-lysine N-methyltransferase ASHR3-like isoform X15.1e-3762.59Show/hide
Query:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITGRFS---------------
        N  +   QV GETRVGVFAARSIEVGEPLTY+YRFVQFGPEVKCHCGA NCQR+LG+KK I+A+DLFWGTKRRRTSAA IT                   
Subjt:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK-ISALDLFWGTKRRRTSAAHITGRFS---------------

Query:  --PTAVYLVLPLALPALHLQQIPSSKDHKLQSPVTSIKG
             ++L+LP  L  LHLQ IPSSK HKLQS + SI+G
Subjt:  --PTAVYLVLPLALPALHLQQIPSSKDHKLQSPVTSIKG

SwissProt top hitse value%identityAlignment
Q4PBL3 Histone-lysine N-methyltransferase, H3 lysine-36 specific3.1e-0745.76Show/hide
Query:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEV-KCHCGAPNCQRYLGTK
        N  VS  QVG   R+G+FA R+I+ GE LT+ Y   ++G +  +C CG PNC   LG K
Subjt:  NLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEV-KCHCGAPNCQRYLGTK

Q4WTT2 Histone-lysine N-methyltransferase, H3 lysine-36 specific5.3e-0742.62Show/hide
Query:  NNLCVSDKQVGGE-TRVGVFAARSIEVGEPLTYEYRFVQFGPEVK-CHCGAPNCQRYLGTK
        N  C  DK V GE  R+G+FA R+I+ GE L + Y   ++G + + C+CG PNC  ++G K
Subjt:  NNLCVSDKQVGGE-TRVGVFAARSIEVGEPLTYEYRFVQFGPEVK-CHCGAPNCQRYLGTK

Q945S8 Histone-lysine N-methyltransferase ASHH32.5e-1260Show/hide
Query:  VGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTK
        + GETR+G+FA R I+ GE LTY+Y+FVQFG +  CHCGA  C+R LG K
Subjt:  VGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTK

Q949T8 Histone-lysine N-methyltransferase ASHR31.4e-2367.06Show/hide
Query:  LNHPILLKNNLCVSDK-QVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK--ISALDLFWGTKRRR
        LNH     N  CV +K QV GETRVGVFAAR IE GEPLTY+YRFVQFGPEVKC+CG+ NCQ YLGTK+   + L + WG KRRR
Subjt:  LNHPILLKNNLCVSDK-QVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK--ISALDLFWGTKRRR

Q9M1X9 Putative histone-lysine N-methyltransferase ASHH41.0e-1056Show/hide
Query:  VGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTK
        + GETR+G+FA R I  GE LTY+Y+FVQFG +  C+CGA  C++ LG K
Subjt:  VGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTK

Arabidopsis top hitse value%identityAlignment
AT1G76710.1 SET domain group 264.6e-0646.94Show/hide
Query:  GETRVGVFAARSIEVGEPLTYEYRFVQF-GPEVKCHCGAPNCQRYLGTK
        GE RVG+FA  SI     L Y+Y F  + G +V+C CGA  C  +LG K
Subjt:  GETRVGVFAARSIEVGEPLTYEYRFVQF-GPEVKCHCGAPNCQRYLGTK

AT1G76710.2 SET domain group 264.6e-0646.94Show/hide
Query:  GETRVGVFAARSIEVGEPLTYEYRFVQF-GPEVKCHCGAPNCQRYLGTK
        GE RVG+FA  SI     L Y+Y F  + G +V+C CGA  C  +LG K
Subjt:  GETRVGVFAARSIEVGEPLTYEYRFVQF-GPEVKCHCGAPNCQRYLGTK

AT2G44150.1 histone-lysine N-methyltransferase ASHH31.8e-1360Show/hide
Query:  VGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTK
        + GETR+G+FA R I+ GE LTY+Y+FVQFG +  CHCGA  C+R LG K
Subjt:  VGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTK

AT3G59960.1 histone-lysine N-methyltransferase ASHH47.4e-1256Show/hide
Query:  VGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTK
        + GETR+G+FA R I  GE LTY+Y+FVQFG +  C+CGA  C++ LG K
Subjt:  VGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTK

AT4G30860.1 SET domain group 49.9e-2567.06Show/hide
Query:  LNHPILLKNNLCVSDK-QVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK--ISALDLFWGTKRRR
        LNH     N  CV +K QV GETRVGVFAAR IE GEPLTY+YRFVQFGPEVKC+CG+ NCQ YLGTK+   + L + WG KRRR
Subjt:  LNHPILLKNNLCVSDK-QVGGETRVGVFAARSIEVGEPLTYEYRFVQFGPEVKCHCGAPNCQRYLGTKK--ISALDLFWGTKRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATAACACCTTCCGATTTGAGAGTGCTAGATGTTCTTCAGATGAATGCCCGTGCCCAAGGCGGGCTGACAGGACTATTGTATTTGTTCAATGGGCAGCATGCAGT
GTCAGTAAGTGACATGGAGATTTTGCATGGCCATAGAAAGACAGTTATCATCTTTTTCTTTCTGGGACAAAAGATGATAATCATGCTGAACCATCCCATTCTTTTAAAGA
ACAATTTGTGCGTATCAGACAAGCAAGTTGGGGGAGAAACACGTGTTGGTGTCTTTGCTGCTCGATCAATCGAGGTTGGAGAGCCATTAACATATGAATACAGATTTGTG
CAATTTGGACCTGAAGTGAAATGCCATTGTGGTGCTCCAAACTGTCAACGCTATCTTGGAACCAAAAAAATAAGTGCCTTGGACCTTTTCTGGGGTACGAAACGCAGGAG
AACGTCAGCAGCTCACATAACTGGTCGATTTTCTCCCACCGCCGTGTATCTGGTTCTGCCGCTTGCACTCCCAGCTTTGCATCTTCAGCAAATTCCCTCTTCAAAAGACC
ATAAACTTCAATCACCAGTTACAAGCATCAAGGGTCTGCAAGAGGAAATGGAGACCCAAAATCCAAGAGCCATTGGCATAAGCATCATGCGGGCTTCCACTGATCTCAAA
ACCATCATAGTTTTGAAGCACTCTCCTTCCACCACCATAAACAAATCTCATCTCTCTCCTTCTCCAAAAGCTGCAACGAACAGTTCAAAATATCCTCCGTACACTTTCTT
TACATATTCCGAGTCCTTTGCTGCCTGCAACAACGCATATCTTTTTCCACCACCTTCTACCTCCACTTCCATCTCCACCACTACTATTAACAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATATAACACCTTCCGATTTGAGAGTGCTAGATGTTCTTCAGATGAATGCCCGTGCCCAAGGCGGGCTGACAGGACTATTGTATTTGTTCAATGGGCAGCATGCAGT
GTCAGTAAGTGACATGGAGATTTTGCATGGCCATAGAAAGACAGTTATCATCTTTTTCTTTCTGGGACAAAAGATGATAATCATGCTGAACCATCCCATTCTTTTAAAGA
ACAATTTGTGCGTATCAGACAAGCAAGTTGGGGGAGAAACACGTGTTGGTGTCTTTGCTGCTCGATCAATCGAGGTTGGAGAGCCATTAACATATGAATACAGATTTGTG
CAATTTGGACCTGAAGTGAAATGCCATTGTGGTGCTCCAAACTGTCAACGCTATCTTGGAACCAAAAAAATAAGTGCCTTGGACCTTTTCTGGGGTACGAAACGCAGGAG
AACGTCAGCAGCTCACATAACTGGTCGATTTTCTCCCACCGCCGTGTATCTGGTTCTGCCGCTTGCACTCCCAGCTTTGCATCTTCAGCAAATTCCCTCTTCAAAAGACC
ATAAACTTCAATCACCAGTTACAAGCATCAAGGGTCTGCAAGAGGAAATGGAGACCCAAAATCCAAGAGCCATTGGCATAAGCATCATGCGGGCTTCCACTGATCTCAAA
ACCATCATAGTTTTGAAGCACTCTCCTTCCACCACCATAAACAAATCTCATCTCTCTCCTTCTCCAAAAGCTGCAACGAACAGTTCAAAATATCCTCCGTACACTTTCTT
TACATATTCCGAGTCCTTTGCTGCCTGCAACAACGCATATCTTTTTCCACCACCTTCTACCTCCACTTCCATCTCCACCACTACTATTAACAAATAA
Protein sequenceShow/hide protein sequence
MNITPSDLRVLDVLQMNARAQGGLTGLLYLFNGQHAVSVSDMEILHGHRKTVIIFFFLGQKMIIMLNHPILLKNNLCVSDKQVGGETRVGVFAARSIEVGEPLTYEYRFV
QFGPEVKCHCGAPNCQRYLGTKKISALDLFWGTKRRRTSAAHITGRFSPTAVYLVLPLALPALHLQQIPSSKDHKLQSPVTSIKGLQEEMETQNPRAIGISIMRASTDLK
TIIVLKHSPSTTINKSHLSPSPKAATNSSKYPPYTFFTYSESFAACNNAYLFPPPSTSTSISTTTINK