; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G005000 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G005000
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr11:2412754..2415117
RNA-Seq ExpressionCmoCh11G005000
SyntenyCmoCh11G005000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587862.1 hypothetical protein SDJN03_16427, partial [Cucurbita argyrosperma subsp. sororia]4.0e-50100Show/hide
Query:  MLWSRTNFKWNDKINFVCQSVKSVHSVNVPRTRFVLFPERLFLFGWASAVSFLPLSTLSIVGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGTFE
        MLWSRTNFKWNDKINFVCQSVKSVHSVNVPRTRFVLFPERLFLFGWASAVSFLPLSTLSIVGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGTFE
Subjt:  MLWSRTNFKWNDKINFVCQSVKSVHSVNVPRTRFVLFPERLFLFGWASAVSFLPLSTLSIVGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGTFE

KAG7021750.1 hypothetical protein SDJN02_15477, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-2598.39Show/hide
Query:  ERLFLFGWASAVSFLPLSTLSIVGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGTFE
        +RLFLFGWASAVSFLPLSTLSIVGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGTFE
Subjt:  ERLFLFGWASAVSFLPLSTLSIVGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGTFE

KAG7023480.1 hypothetical protein SDJN02_14505, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-2541.1Show/hide
Query:  QIIGL---PSSGPETLGLRLGGISLIILP-------------------------------SGRSFLFNGPDNFRLLRFITNFS-----------------
        Q +GL   PSSGP+TLGL LGGISLIILP                                G SFL NGPD+FRLL F+ NFS                 
Subjt:  QIIGL---PSSGPETLGLRLGGISLIILP-------------------------------SGRSFLFNGPDNFRLLRFITNFS-----------------

Query:  ---------------------------------ESEVPDAVSEAVLGFGESGKEKFLVSGLLLCMEFGEFHDLEPVCGDGDSNFEEKIVVETGNVFRCEA
                                         E+++P+AV EAVL   ESGKE+FL+ G    + FGEF +LEPV GDG+S+F EKIVVET NVF  EA
Subjt:  ---------------------------------ESEVPDAVSEAVLGFGESGKEKFLVSGLLLCMEFGEFHDLEPVCGDGDSNFEEKIVVETGNVFRCEA

Query:  ILDEKKTVFVGMKRVEAGS
        I  E + VFV +K VEAGS
Subjt:  ILDEKKTVFVGMKRVEAGS

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTGGTCTCGAACTAATTTCAAATGGAACGATAAAATTAATTTCGTCTGCCAATCGGTGAAATCAGTTCATTCAGTTAATGTTCCACGAACTCGCTTCGTACTGTT
TCCAGAACGGTTGTTCTTGTTTGGTTGGGCGTCGGCCGTCTCCTTCCTTCCGTTGTCGACTCTGTCTATTGTCGGCGTGAAATTGTGGCCGGAAAGTTGCGTGCTGATGA
TTACCGATATCCGTTCGGTCGGTCAACGTGGTGATTTCTCAAAGATGCATTTACAGGTTGATACGGAAGGAACCTTTGAACAAATTATTGGGCTTCCTTCTAGCGGCCCA
GAAACTCTTGGGCTTCGGCTCGGCGGTATTAGCCTCATCATTCTCCCTTCGGGCCGCTCTTTTCTATTTAATGGCCCAGATAACTTCAGGCTTTTACGGTTCATCACTAA
CTTCTCTGAGAGTGAGGTTCCGGATGCAGTTTCTGAGGCAGTTCTTGGTTTTGGTGAAAGCGGAAAGGAGAAATTTCTTGTGAGTGGGTTGTTGTTGTGTATGGAATTTG
GCGAGTTTCATGATCTCGAGCCTGTCTGTGGCGACGGAGATTCCAATTTTGAGGAGAAAATCGTGGTTGAAACTGGAAATGTGTTCAGGTGTGAGGCCATATTGGACGAA
AAGAAGACCGTATTCGTAGGTATGAAGAGGGTCGAGGCCGGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTGGTCTCGAACTAATTTCAAATGGAACGATAAAATTAATTTCGTCTGCCAATCGGTGAAATCAGTTCATTCAGTTAATGTTCCACGAACTCGCTTCGTACTGTT
TCCAGAACGGTTGTTCTTGTTTGGTTGGGCGTCGGCCGTCTCCTTCCTTCCGTTGTCGACTCTGTCTATTGTCGGCGTGAAATTGTGGCCGGAAAGTTGCGTGCTGATGA
TTACCGATATCCGTTCGGTCGGTCAACGTGGTGATTTCTCAAAGATGCATTTACAGGTTGATACGGAAGGAACCTTTGAACAAATTATTGGGCTTCCTTCTAGCGGCCCA
GAAACTCTTGGGCTTCGGCTCGGCGGTATTAGCCTCATCATTCTCCCTTCGGGCCGCTCTTTTCTATTTAATGGCCCAGATAACTTCAGGCTTTTACGGTTCATCACTAA
CTTCTCTGAGAGTGAGGTTCCGGATGCAGTTTCTGAGGCAGTTCTTGGTTTTGGTGAAAGCGGAAAGGAGAAATTTCTTGTGAGTGGGTTGTTGTTGTGTATGGAATTTG
GCGAGTTTCATGATCTCGAGCCTGTCTGTGGCGACGGAGATTCCAATTTTGAGGAGAAAATCGTGGTTGAAACTGGAAATGTGTTCAGGTGTGAGGCCATATTGGACGAA
AAGAAGACCGTATTCGTAGGTATGAAGAGGGTCGAGGCCGGTTCTTGA
Protein sequenceShow/hide protein sequence
MLWSRTNFKWNDKINFVCQSVKSVHSVNVPRTRFVLFPERLFLFGWASAVSFLPLSTLSIVGVKLWPESCVLMITDIRSVGQRGDFSKMHLQVDTEGTFEQIIGLPSSGP
ETLGLRLGGISLIILPSGRSFLFNGPDNFRLLRFITNFSESEVPDAVSEAVLGFGESGKEKFLVSGLLLCMEFGEFHDLEPVCGDGDSNFEEKIVVETGNVFRCEAILDE
KKTVFVGMKRVEAGS