; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G005080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G005080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRING-type domain-containing protein
Genome locationCmo_Chr11:2448918..2451399
RNA-Seq ExpressionCmoCh11G005080
SyntenyCmoCh11G005080
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022134599.1 uncharacterized protein LOC111006826 [Momordica charantia]8.7e-8681.86Show/hide
Query:  MGKRKR-DSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDH
        MGKRKR  SD T PD P H SG V FSNQMDV SEEDQ+LARP FMKR  HQYSHQY RRGSTSQ NASTSRENRVRT+LEERPAFK FAAH NSEFP+H
Subjt:  MGKRKR-DSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDH

Query:  IDGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEP--PIDDS
        I+ IE +FWGPERIRY+SLGKDAISS+G+RMLCGICQKLMRRKLC LGNT SS ELPVAAVLVCGHVYHADCLE R  VEDRSDPPCPLCTEP   IDDS
Subjt:  IDGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEP--PIDDS

Query:  KGEQ
        KG Q
Subjt:  KGEQ

XP_022925430.1 uncharacterized protein LOC111432724 [Cucurbita moschata]8.9e-115100Show/hide
Query:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI
        MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI
Subjt:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI

Query:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGE
        DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGE
Subjt:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGE

Query:  QE
        QE
Subjt:  QE

XP_023007443.1 uncharacterized protein LOC111499940 [Cucurbita maxima]5.2e-10795.54Show/hide
Query:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI
        MGKRKRD+DQTLPDRPFHFSG VTFSNQMDVRSEEDQTLARP FMKRLCHQYSHQYYRRGS SQ NASTS ENRVRTILEERPAFK FAAHRNSEFPDHI
Subjt:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI

Query:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGE
        DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGIC KLMRRKLCSLGNT SSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGE
Subjt:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGE

Query:  QE
        QE
Subjt:  QE

XP_023531302.1 uncharacterized protein LOC111793584 [Cucurbita pepo subsp. pepo]5.8e-11499.01Show/hide
Query:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI
        MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARP FMKRLCHQYSHQYYRRGSTSQPNASTSR+NRVRTILEERPAFKFFAAHRNSEFPDHI
Subjt:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI

Query:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGE
        DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGE
Subjt:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGE

Query:  QE
        QE
Subjt:  QE

XP_038878632.1 uncharacterized protein LOC120070818 isoform X2 [Benincasa hispida]3.0e-8680.49Show/hide
Query:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI
        MGKRKR SDQT  D P H SG V FSNQMDVRSEED++ ARP FMKR  HQYSHQY RRGSTS  NAS SRENRV+T+LEERPAFK FAAH NSEFPDHI
Subjt:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI

Query:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPP--IDDSK
        + IE++FWGPERIRYNS GKDA SS+GMRM+CGICQKLMRRKLC LGNT SS ELPVAAVLVCGHVYHA+CLENR NVEDRSDPPCPLC EPP  +DDSK
Subjt:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPP--IDDSK

Query:  -GEQE
         GEQE
Subjt:  -GEQE

TrEMBL top hitse value%identityAlignment
A0A1S3B956 uncharacterized protein LOC103487402 isoform X25.7e-8380Show/hide
Query:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI
        MGKRKR SDQT  D P H SG V FSNQ DVRSEED +LARP FMKR  H YSHQY RRGSTSQ NASTSRENRVRT+LEERPAFK FAAH NSEFPD I
Subjt:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI

Query:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTE--PPIDDSK
        + IE +F GPERIRYNSLGKDAISS+ MRM+CGICQKLMRRKLC LGNT SS ELPVAAVLVCGHVYHA+CLENR +VEDRSDPPCPLCT+  P +DDSK
Subjt:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTE--PPIDDSK

Query:  -GEQE
         GEQE
Subjt:  -GEQE

A0A5A7U906 RING-type domain-containing protein5.7e-8380Show/hide
Query:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI
        MGKRKR SDQT  D P H SG V FSNQ DVRSEED +LARP FMKR  H YSHQY RRGSTSQ NASTSRENRVRT+LEERPAFK FAAH NSEFPD I
Subjt:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI

Query:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTE--PPIDDSK
        + IE +F GPERIRYNSLGKDAISS+ MRM+CGICQKLMRRKLC LGNT SS ELPVAAVLVCGHVYHA+CLENR +VEDRSDPPCPLCT+  P +DDSK
Subjt:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTE--PPIDDSK

Query:  -GEQE
         GEQE
Subjt:  -GEQE

A0A6J1BZ68 uncharacterized protein LOC1110068264.2e-8681.86Show/hide
Query:  MGKRKR-DSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDH
        MGKRKR  SD T PD P H SG V FSNQMDV SEEDQ+LARP FMKR  HQYSHQY RRGSTSQ NASTSRENRVRT+LEERPAFK FAAH NSEFP+H
Subjt:  MGKRKR-DSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDH

Query:  IDGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEP--PIDDS
        I+ IE +FWGPERIRY+SLGKDAISS+G+RMLCGICQKLMRRKLC LGNT SS ELPVAAVLVCGHVYHADCLE R  VEDRSDPPCPLCTEP   IDDS
Subjt:  IDGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEP--PIDDS

Query:  KGEQ
        KG Q
Subjt:  KGEQ

A0A6J1EHY3 uncharacterized protein LOC1114327244.3e-115100Show/hide
Query:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI
        MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI
Subjt:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI

Query:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGE
        DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGE
Subjt:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGE

Query:  QE
        QE
Subjt:  QE

A0A6J1L7P0 uncharacterized protein LOC1114999402.5e-10795.54Show/hide
Query:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI
        MGKRKRD+DQTLPDRPFHFSG VTFSNQMDVRSEEDQTLARP FMKRLCHQYSHQYYRRGS SQ NASTS ENRVRTILEERPAFK FAAHRNSEFPDHI
Subjt:  MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHI

Query:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGE
        DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGIC KLMRRKLCSLGNT SSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGE
Subjt:  DGIERSFWGPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGE

Query:  QE
        QE
Subjt:  QE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19680.1 RING/U-box superfamily protein1.5e-1139.08Show/hide
Query:  GPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSR-ELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPI
        G  R+   S  + + S +  +  CG C KL+  +      +P +R +LP+ AVL CGHVYHA CLE   N  ++ DP CP+CTE  +
Subjt:  GPERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSR-ELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPI

AT1G75400.1 RING/U-box superfamily protein3.4e-1145.16Show/hide
Query:  RMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCT
        + +CG C KL+  +     ++ ++ ELP+AAVL CGHVYHA+CLE      ++ DP CP+CT
Subjt:  RMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCT

AT2G21500.1 RING/U-box superfamily protein2.2e-1041.77Show/hide
Query:  LGKDAISSNGMR-----MLCGICQK-LMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCT
        L +D I + G R       CG C + L  + L S     ++ EL VAA+L CGHVYH++CLE      D+ DP CP+CT
Subjt:  LGKDAISSNGMR-----MLCGICQK-LMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCT

AT2G21500.2 RING/U-box superfamily protein2.2e-1041.77Show/hide
Query:  LGKDAISSNGMR-----MLCGICQK-LMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCT
        L +D I + G R       CG C + L  + L S     ++ EL VAA+L CGHVYH++CLE      D+ DP CP+CT
Subjt:  LGKDAISSNGMR-----MLCGICQK-LMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCT

AT4G39140.1 RING/U-box superfamily protein2.2e-1041.25Show/hide
Query:  LGKDAISSNGMRM------LCGICQK-LMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCT
        L +D I  +G RM       CG C + L  + L S      + EL V+A+L CGHVYH +CLE      D+ DP CP+CT
Subjt:  LGKDAISSNGMRM------LCGICQK-LMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGCGCAAGCGAGACTCTGATCAGACCCTCCCCGATCGTCCTTTTCATTTTTCTGGGGCAGTGACTTTTTCCAATCAAATGGATGTGCGGTCGGAAGAGGATCA
GACTCTTGCCCGCCCGGCATTCATGAAACGTTTATGTCATCAGTATAGCCACCAATATTATCGGCGAGGTTCAACCAGTCAACCAAATGCATCCACCTCCCGTGAAAACC
GAGTGAGAACCATACTTGAAGAGCGACCCGCTTTTAAGTTTTTTGCTGCTCATCGCAACTCAGAGTTTCCAGACCATATAGATGGCATTGAGCGCTCATTTTGGGGGCCA
GAAAGGATAAGGTACAATTCCTTAGGGAAGGATGCAATATCATCTAATGGAATGAGGATGCTATGTGGGATTTGCCAGAAGCTGATGAGACGAAAGCTTTGCTCTCTCGG
CAACACACCTTCTTCTCGCGAACTTCCCGTTGCTGCAGTTTTGGTTTGTGGCCATGTCTATCATGCAGACTGTCTGGAGAACAGGCCAAACGTCGAAGATAGGAGCGACC
CGCCTTGTCCATTGTGCACGGAACCGCCTATTGACGATTCGAAAGGAGAACAGGAATGA
mRNA sequenceShow/hide mRNA sequence
AGCAAGAACTCGAAATCGAAATCGAACAACACACAACAAATTCCAGTGATTTCGTTGAATCGAAAATCGGCAACAGGGTTTGTGTTCAAGCTCCGAAATGGCCCAAATCA
AAAGCGTTTATTAAATTCAATTCAATTTCCCATGTTCATCACCACAGATCATCGCCTAAATTTAACTTCCGAATTTAATCCTCACTCTCTTCGCTTTATTAACGATCTTA
ATCACCATGGGAAAGCGCAAGCGAGACTCTGATCAGACCCTCCCCGATCGTCCTTTTCATTTTTCTGGGGCAGTGACTTTTTCCAATCAAATGGATGTGCGGTCGGAAGA
GGATCAGACTCTTGCCCGCCCGGCATTCATGAAACGTTTATGTCATCAGTATAGCCACCAATATTATCGGCGAGGTTCAACCAGTCAACCAAATGCATCCACCTCCCGTG
AAAACCGAGTGAGAACCATACTTGAAGAGCGACCCGCTTTTAAGTTTTTTGCTGCTCATCGCAACTCAGAGTTTCCAGACCATATAGATGGCATTGAGCGCTCATTTTGG
GGGCCAGAAAGGATAAGGTACAATTCCTTAGGGAAGGATGCAATATCATCTAATGGAATGAGGATGCTATGTGGGATTTGCCAGAAGCTGATGAGACGAAAGCTTTGCTC
TCTCGGCAACACACCTTCTTCTCGCGAACTTCCCGTTGCTGCAGTTTTGGTTTGTGGCCATGTCTATCATGCAGACTGTCTGGAGAACAGGCCAAACGTCGAAGATAGGA
GCGACCCGCCTTGTCCATTGTGCACGGAACCGCCTATTGACGATTCGAAAGGAGAACAGGAATGAGTTGAGCTGTACATATGATATCACATCACACCAACAATAGGGGAA
TTAGGCGTGGCATTGAATAGGTGGAGTTTTTTGCATCCTCAACTATTTTTCCATGAACATATCTATATCTATCACTGTCTTTTTGGATGGCTGTGACTTGAAAAGGAAAA
TGGTAGCTTTAAATCACAACGTTACTGAAAATAGTGATATCGATTCGAGGATTTGAGCTCCGAGCTCCGTAGATTGGTTTTTGCGTAGAAGTAGAGTGAATTTTTGTTAA
GTAGCAGCAGAGGAATTTAGTTGGAGACATTTATGTACTTGTGTAGGGCAATGTCTAAAACAGTATATTTTAGAGAATAAAGATATCATGACCATAGATTTCCATTTTT
Protein sequenceShow/hide protein sequence
MGKRKRDSDQTLPDRPFHFSGAVTFSNQMDVRSEEDQTLARPAFMKRLCHQYSHQYYRRGSTSQPNASTSRENRVRTILEERPAFKFFAAHRNSEFPDHIDGIERSFWGP
ERIRYNSLGKDAISSNGMRMLCGICQKLMRRKLCSLGNTPSSRELPVAAVLVCGHVYHADCLENRPNVEDRSDPPCPLCTEPPIDDSKGEQE