; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G005580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G005580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr11:2724511..2727370
RNA-Seq ExpressionCmoCh11G005580
SyntenyCmoCh11G005580
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046741.1 hypothetical protein E6C27_scaffold216G00220 [Cucumis melo var. makuwa]7.6e-2069.14Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR
        M+RSSSTSR+FDE+SVD+ P   SSPPLKNEA  +LPLFK ++  KKEMG  FK PG NAVHLIPL L L ALILW+CS+R
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR
KAE8653076.1 hypothetical protein Csa_019861 [Cucumis sativus]3.8e-1967.5Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSS
        M+RSSSTSR+F+E+SVD+ P   SSPPLKNEA  +LPLFK ++  KKEMG  FK PG+NAVHLIPL L L ALILW+CS+
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSS
KAG6587911.1 hypothetical protein SDJN03_16476, partial [Cucurbita argyrosperma subsp. sororia]4.4e-3697.56Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAP-DLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRV
        MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAP DLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR+
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAP-DLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRV
KAG7021797.1 hypothetical protein SDJN02_15525, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-3690.11Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAP-DLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR----VNMFIE
        MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAP DLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR    +N+F++
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAP-DLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR----VNMFIE
XP_030474027.1 uncharacterized protein LOC115691521 [Syzygium oleosum]1.7e-1153.09Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFK---IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICS
        M R SS SR+FDE+ V++ P  T+   L+N + + LPLF+    D+ KKE G H K PG+ AVHLIPL+LLL AL LW+CS
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFK---IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICS
TrEMBL top hitse value%identityAlignment
A0A059CNE3 Uncharacterized protein4.5e-1046.91Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFK---IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICS
        MHR SS SR+ DE+ V++ P   +   L+N + + LPLF+    D  KKE G H + PG+ A+HLIP++L L AL LW+CS
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFK---IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICS
A0A067KJC2 Uncharacterized protein1.3e-0955Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFK--IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICS
        MHRSSSTSR  DE SV+         P+K  +   LP++K   D  KKE+G H K  G+NAVHLIPLILLL ALILW+ S
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFK--IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICS
A0A0A0LTP3 Uncharacterized protein3.7e-2067.9Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR
        M+RSSSTSR+F+E+SVD+ P   SSPPLKNEA  +LPLFK ++  KKEMG  FK PG+NAVHLIPL L L ALILW+CS+R
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR
A0A438EIF2 Uncharacterized protein4.1e-1148.84Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFK--IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRVNMF
        M+RS+STSR  DE+ V++ P    S PLK  A + LP++    D  KKEM  H K  G+NA+HLIPL+L+L ALILW+ S   N +
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFK--IDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRVNMF
A0A5A7TZH0 Uncharacterized protein3.7e-2069.14Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR
        M+RSSSTSR+FDE+SVD+ P   SSPPLKNEA  +LPLFK ++  KKEMG  FK PG NAVHLIPL L L ALILW+CS+R
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35658.1 unknown protein9.6e-0535.63Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPD-----LLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRV
        M RS+S S   D+ S + P    S P +K  A       LLP +  ++ P K+    F+   +NA+H IP++L+L A+ILW+ S+ V
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPD-----LLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRV
AT2G35658.2 unknown protein7.4e-0535.23Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPD-----LLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRVN
        M RS+S S   D+ S + P    S P +K  A       LLP +  ++ P K+    F+   +NA+H IP++L+L A+ILW+ S+  N
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPD-----LLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRVN
AT2G35658.3 unknown protein1.3e-0435.29Show/hide
Query:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPD-----LLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSS
        M RS+S S   D+ S + P    S P +K  A       LLP +  ++ P K+    F+   +NA+H IP++L+L A+ILW+ S+
Subjt:  MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPD-----LLPLFKIDT-PKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAGGTCTTCAAGCACGTCTCGAAACTTCGACGAGTACTCGGTCGACATGCCACCGGGTTTCACCAGCTCCCCACCATTGAAGAATGAAGCCCCTGATCTGTTGCC
ACTGTTCAAGATTGATACCCCCAAGAAAGAAATGGGGCCACATTTTAAACCTCCTGGACAAAATGCAGTTCATCTCATTCCTCTCATTCTGCTTCTCTCTGCTTTAATCC
TCTGGATTTGTTCATCCAGAGTGAACATGTTTATAGAAACTATAAGTCTTGGAGAAAGAGTTTTAGTTTTCATTCTCATAGTTTTGGACCCTCCTATATTGAATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATAGGTCTTCAAGCACGTCTCGAAACTTCGACGAGTACTCGGTCGACATGCCACCGGGTTTCACCAGCTCCCCACCATTGAAGAATGAAGCCCCTGATCTGTTGCC
ACTGTTCAAGATTGATACCCCCAAGAAAGAAATGGGGCCACATTTTAAACCTCCTGGACAAAATGCAGTTCATCTCATTCCTCTCATTCTGCTTCTCTCTGCTTTAATCC
TCTGGATTTGTTCATCCAGAGTGAACATGTTTATAGAAACTATAAGTCTTGGAGAAAGAGTTTTAGTTTTCATTCTCATAGTTTTGGACCCTCCTATATTGAATTTTTGA
Protein sequenceShow/hide protein sequence
MHRSSSTSRNFDEYSVDMPPGFTSSPPLKNEAPDLLPLFKIDTPKKEMGPHFKPPGQNAVHLIPLILLLSALILWICSSRVNMFIETISLGERVLVFILIVLDPPILNF