| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6587915.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] | 2.5e-38 | 87.5 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGYGQTSRSKRD
MIHSGVKPDSYTFPFLFKS AKLASAHGGKQIRA DAISFTAPIAGYAMWGNTDRARKVF EMPVRDVVSWNAMVAGYGQTSRSKRD
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGYGQTSRSKRD
|
|
| KAG6589865.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] | 1.5e-30 | 59.68 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
MIH+GV+P+SYTFPFL KSCAKLASA GKQI A+VLKLGF DAISFTA IAGY +WG DRARK+FD
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
Query: EMPVRDVVSWNAMVAGYGQTSRSK
EMPVRDVVSWNAM+AGY QT RSK
Subjt: EMPVRDVVSWNAMVAGYGQTSRSK
|
|
| XP_022961045.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucurbita moschata] | 1.5e-30 | 59.68 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
MIH+GV+P+SYTFPFL KSCAKLASA GKQI A+VLKLGF DAISFTA IAGY +WG DRARK+FD
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
Query: EMPVRDVVSWNAMVAGYGQTSRSK
EMPVRDVVSWNAM+AGY QT RSK
Subjt: EMPVRDVVSWNAMVAGYGQTSRSK
|
|
| XP_023515625.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Cucurbita pepo subsp. pepo] | 1.5e-30 | 59.68 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
MIH+GV+P+SYTFPFL KSCAKLASA GKQI A+VLKLGF DAISFTA IAGY +WG DRARK+FD
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
Query: EMPVRDVVSWNAMVAGYGQTSRSK
EMPVRDVVSWNAM+AGY QT RSK
Subjt: EMPVRDVVSWNAMVAGYGQTSRSK
|
|
| XP_038878535.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic isoform X1 [Benincasa hispida] | 1.1e-30 | 59.68 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
MI+SGV+P+SYTFPFL KSCAKLASAH GKQI A++LKLGF DAISFTA IAGYA+WG D ARK+FD
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
Query: EMPVRDVVSWNAMVAGYGQTSRSK
EMPVRDVVSWNAM+AGY QT RSK
Subjt: EMPVRDVVSWNAMVAGYGQTSRSK
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LU28 DYW_deaminase domain-containing protein | 2.0e-30 | 58.87 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
MI+SGV+P+SYTFPFL KSCAKLASAH GKQI A+VLKLGF DAISFTA IAGYA+WG DRAR++FD
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
Query: EMPVRDVVSWNAMVAGYGQTSRSK
EMPV+DVVSWNAM+AGY Q RSK
Subjt: EMPVRDVVSWNAMVAGYGQTSRSK
|
|
| A0A1S3CMX0 pentatricopeptide repeat-containing protein At1g08070, chloroplastic | 1.7e-29 | 58.06 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
MI+SGV+P+SYTFPFL KSCAKLASA GKQI A+VLKLGF DAISFTA IAGYA+WG DRAR++FD
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
Query: EMPVRDVVSWNAMVAGYGQTSRSK
EMPV+DVVSWNAM+AGY Q RSK
Subjt: EMPVRDVVSWNAMVAGYGQTSRSK
|
|
| A0A5A7TTJ1 Pentatricopeptide repeat-containing protein | 1.7e-29 | 58.06 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
MI+SGV+P+SYTFPFL KSCAKLASA GKQI A+VLKLGF DAISFTA IAGYA+WG DRAR++FD
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
Query: EMPVRDVVSWNAMVAGYGQTSRSK
EMPV+DVVSWNAM+AGY Q RSK
Subjt: EMPVRDVVSWNAMVAGYGQTSRSK
|
|
| A0A6J1HAU9 pentatricopeptide repeat-containing protein At1g08070, chloroplastic | 7.0e-31 | 59.68 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
MIH+GV+P+SYTFPFL KSCAKLASA GKQI A+VLKLGF DAISFTA IAGY +WG DRARK+FD
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
Query: EMPVRDVVSWNAMVAGYGQTSRSK
EMPVRDVVSWNAM+AGY QT RSK
Subjt: EMPVRDVVSWNAMVAGYGQTSRSK
|
|
| A0A6J1JHE6 pentatricopeptide repeat-containing protein At1g08070, chloroplastic | 1.6e-30 | 58.87 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
MIH+GV+P+SYTFPFL KSCA+LASA GKQI A+VLKLGF DAISFTA IAGY +WG DRARK+FD
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGF------------------------------GLMDAISFTAPIAGYAMWGNTDRARKVFD
Query: EMPVRDVVSWNAMVAGYGQTSRSK
EMPVRDVVSWNAM+AGY QT RSK
Subjt: EMPVRDVVSWNAMVAGYGQTSRSK
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| O49619 Pentatricopeptide repeat-containing protein At4g35130, chloroplastic | 3.6e-16 | 47.13 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGY
M+ +GVK D++T+PF+ KS A ++S GK+I A V+KLGF + D + I+ Y G A KVF+EMP RD+VSWN+M++GY
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGY
|
|
| Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic | 9.2e-20 | 41.94 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGL------------------------------MDAISFTAPIAGYAMWGNTDRARKVFD
MI G+ P+SYTFPF+ KSCAK + G+QI +VLKLG L D +S+TA I GYA G + A+K+FD
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGL------------------------------MDAISFTAPIAGYAMWGNTDRARKVFD
Query: EMPVRDVVSWNAMVAGYGQTSRSK
E+PV+DVVSWNAM++GY +T K
Subjt: EMPVRDVVSWNAMVAGYGQTSRSK
|
|
| Q9LUJ2 Pentatricopeptide repeat-containing protein At3g22690 | 1.1e-15 | 42.55 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGYGQTSRSK
M++SG+ PD YTFPF +CAK + G QI ++K+G+ D + + YA G D ARKVFDEM R+VVSW +M+ GY + +K
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGYGQTSRSK
|
|
| Q9LUS3 Pentatricopeptide repeat-containing protein At3g16610 | 3.1e-15 | 45.98 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGY
M++SGV+P YT+PF+ K+CA L + GK I ++V F D TA + YA G + A KVFDEMP RD+V+WNAM++G+
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGY
|
|
| Q9SN39 Pentatricopeptide repeat-containing protein DOT4, chloroplastic | 1.6e-16 | 47.13 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGY
M+ SGV+ DSYTF + KS + L S HGG+Q+ ++LK GFG +++ + +A Y D ARKVFDEM RDV+SWN+++ GY
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGY
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 6.5e-21 | 41.94 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGL------------------------------MDAISFTAPIAGYAMWGNTDRARKVFD
MI G+ P+SYTFPF+ KSCAK + G+QI +VLKLG L D +S+TA I GYA G + A+K+FD
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGL------------------------------MDAISFTAPIAGYAMWGNTDRARKVFD
Query: EMPVRDVVSWNAMVAGYGQTSRSK
E+PV+DVVSWNAM++GY +T K
Subjt: EMPVRDVVSWNAMVAGYGQTSRSK
|
|
| AT3G22690.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885) | 7.5e-17 | 42.55 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGYGQTSRSK
M++SG+ PD YTFPF +CAK + G QI ++K+G+ D + + YA G D ARKVFDEM R+VVSW +M+ GY + +K
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGYGQTSRSK
|
|
| AT3G22690.2 INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification | 7.5e-17 | 42.55 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGYGQTSRSK
M++SG+ PD YTFPF +CAK + G QI ++K+G+ D + + YA G D ARKVFDEM R+VVSW +M+ GY + +K
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGYGQTSRSK
|
|
| AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein | 1.2e-17 | 47.13 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGY
M+ SGV+ DSYTF + KS + L S HGG+Q+ ++LK GFG +++ + +A Y D ARKVFDEM RDV+SWN+++ GY
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGY
|
|
| AT4G35130.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 2.6e-17 | 47.13 | Show/hide |
Query: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGY
M+ +GVK D++T+PF+ KS A ++S GK+I A V+KLGF + D + I+ Y G A KVF+EMP RD+VSWN+M++GY
Subjt: MIHSGVKPDSYTFPFLFKSCAKLASAHGGKQIRAYVLKLGFGLMDAISFTAPIAGYAMWGNTDRARKVFDEMPVRDVVSWNAMVAGY
|
|
