; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G005970 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G005970
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionHeavy metal-associated domain containing protein
Genome locationCmo_Chr11:2879348..2880653
RNA-Seq ExpressionCmoCh11G005970
SyntenyCmoCh11G005970
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily
IPR044526 - Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587944.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia]2.3e-7299.3Show/hide
Query:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME
        MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLI THKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME
Subjt:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME

Query:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
Subjt:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

XP_004151294.1 heavy metal-associated isoprenylated plant protein 45 [Cucumis sativus]3.6e-5481.88Show/hide
Query:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSM--EEQEDE-FDKLPLISTHK---DQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEK
        MGKL KK+ K  DCFS S   +SCSS SCFCINSM  E++EDE FDK PLI+ +    +QLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHC+GCARKVEK
Subjt:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSM--EEQEDE-FDKLPLISTHK---DQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEK

Query:  HISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        HISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSS+A
Subjt:  HISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

XP_022933309.1 heavy metal-associated isoprenylated plant protein 45-like [Cucurbita moschata]6.0e-73100Show/hide
Query:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME
        MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME
Subjt:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME

Query:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
Subjt:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

XP_022973748.1 heavy metal-associated isoprenylated plant protein 45-like [Cucurbita maxima]1.3e-7299.3Show/hide
Query:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME
        MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLI+THKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME
Subjt:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME

Query:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
Subjt:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

XP_023531514.1 heavy metal-associated isoprenylated plant protein 45-like [Cucurbita pepo subsp. pepo]8.6e-7297.9Show/hide
Query:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME
        MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLI +HKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME
Subjt:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME

Query:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        GVSSYTIDLETKMVIIIGD+LPFEVVESVSKVKNAQLWQSSLA
Subjt:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

TrEMBL top hitse value%identityAlignment
A0A0A0LZH7 HMA domain-containing protein1.8e-5481.88Show/hide
Query:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSM--EEQEDE-FDKLPLISTHK---DQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEK
        MGKL KK+ K  DCFS S   +SCSS SCFCINSM  E++EDE FDK PLI+ +    +QLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHC+GCARKVEK
Subjt:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSM--EEQEDE-FDKLPLISTHK---DQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEK

Query:  HISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        HISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSS+A
Subjt:  HISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

A0A1S3CJJ6 uncharacterized protein LOC1035015431.3e-5280.54Show/hide
Query:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSM--EEQEDE-FDKLPLISTHK---DQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEK
        MGKL KK+ K  DCFS S   +SCSS SCFCINSM  E++EDE FDK PLI+ +    +QL TLKDVVNGNQTLAFQLKPKMVTLRVSMHC+GCARKVEK
Subjt:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSM--EEQEDE-FDKLPLISTHK---DQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEK

Query:  HISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        HISKMEGVSSYTIDLE KMVIIIGDILPFEVVESVSKVKNAQLWQSS+A
Subjt:  HISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

A0A6J1CUT7 protein SODIUM POTASSIUM ROOT DEFECTIVE 12.8e-5281.76Show/hide
Query:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSME-EQEDEFDKLPL--ISTH--KDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKH
        MGK  KKI+  LDCFS     SSCS  SCFCINSME +QEDEFDK PL  + TH  K+Q   LKD+VNGNQTLAFQLKPKMV LRVSMHCRGCARKVEKH
Subjt:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSME-EQEDEFDKLPL--ISTH--KDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKH

Query:  ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
Subjt:  ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

A0A6J1EZE4 heavy metal-associated isoprenylated plant protein 45-like2.9e-73100Show/hide
Query:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME
        MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME
Subjt:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME

Query:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
Subjt:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

A0A6J1IE28 heavy metal-associated isoprenylated plant protein 45-like6.4e-7399.3Show/hide
Query:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME
        MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLI+THKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME
Subjt:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKME

Query:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
        GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA
Subjt:  GVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA

SwissProt top hitse value%identityAlignment
Q58FZ0 Protein SODIUM POTASSIUM ROOT DEFECTIVE 21.2e-1554.69Show/hide
Query:  KMVTLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW
        ++V L+VS+HCRGC  KV KH+++M+GV+S+ ID   K V + GDI P E+++S+SKVKNAQ W
Subjt:  KMVTLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW

Q84J88 Heavy metal-associated isoprenylated plant protein 364.1e-0840Show/hide
Query:  LRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKV-KNAQLWQSSL
        LRVS+HC GC RK++K +SK++GV +  ID++ + V +IG++ P  +++ + K  ++A+LW +S+
Subjt:  LRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKV-KNAQLWQSSL

Q8LDS4 Protein SODIUM POTASSIUM ROOT DEFECTIVE 15.3e-1657.81Show/hide
Query:  KMVTLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW
        ++V LRVS+HC+GCA KV+KH+SK++GV+SY ID   K V + GD+ P  V+ S+SKVKNAQ W
Subjt:  KMVTLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW

Q8RXH8 Protein SODIUM POTASSIUM ROOT DEFECTIVE 32.9e-1457.58Show/hide
Query:  KMVTLRVSM--HCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW
        ++V LRVS+  HCRGC  KV+KH+SKM+GV+S+ ID  +K V + GDI P EV+  +SKVKNAQ W
Subjt:  KMVTLRVSM--HCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW

Q94BT9 Copper transport protein ATX13.8e-0636.92Show/hide
Query:  VTLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKV-KNAQLWQS
        V LRV+M C GC   V++ + KMEGV S+ +D++ + V + G++ P  V+++V+K  K    W++
Subjt:  VTLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKV-KNAQLWQS

Arabidopsis top hitse value%identityAlignment
AT2G28660.1 Chloroplast-targeted copper chaperone protein1.8e-1967.16Show/hide
Query:  KMVTLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSS
        ++V LRVS+HC+GC  KV KHISKMEGV+SYTIDL TK V ++G I P  +VES+SKVK AQLW SS
Subjt:  KMVTLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQSS

AT2G37390.1 Chloroplast-targeted copper chaperone protein8.4e-1754.69Show/hide
Query:  KMVTLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW
        ++V L+VS+HCRGC  KV KH+++M+GV+S+ ID   K V + GDI P E+++S+SKVKNAQ W
Subjt:  KMVTLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW

AT3G24450.1 Heavy metal transport/detoxification superfamily protein9.0e-3555.86Show/hide
Query:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLI--STHKD-QLPTLKDVV--NGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKH
        MGKL +KI +  DC  L L  + C   SCFC+N++ ++E+EF+K PLI  ST K  ++  LKDVV  +  QTLAF LKPK+V L+VSMHC GCA+KVEKH
Subjt:  MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLI--STHKD-QLPTLKDVV--NGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKH

Query:  ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQS
        ISK++GV+ Y ++LE+K V++ G+ILP +V+ES+ KVKNAQLW S
Subjt:  ISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLWQS

AT5G02600.1 Heavy metal transport/detoxification superfamily protein3.8e-1757.81Show/hide
Query:  KMVTLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW
        ++V LRVS+HC+GCA KV+KH+SK++GV+SY ID   K V + GD+ P  V+ S+SKVKNAQ W
Subjt:  KMVTLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW

AT5G02600.2 Heavy metal transport/detoxification superfamily protein3.8e-1757.81Show/hide
Query:  KMVTLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW
        ++V LRVS+HC+GCA KV+KH+SK++GV+SY ID   K V + GD+ P  V+ S+SKVKNAQ W
Subjt:  KMVTLRVSMHCRGCARKVEKHISKMEGVSSYTIDLETKMVIIIGDILPFEVVESVSKVKNAQLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGCTGCACAAGAAAATTTCAAAGGCGTTGGACTGTTTTAGTCTTAGTCTTGGTCCCTCCTCTTGTAGCTCAGGCTCTTGTTTTTGCATAAACTCCATGGAAGA
GCAGGAAGATGAGTTTGATAAACTGCCCCTCATATCCACTCACAAAGACCAGCTGCCCACGTTGAAGGACGTTGTCAATGGAAACCAGACCTTGGCCTTTCAACTCAAGC
CCAAGATGGTGACTCTAAGGGTATCCATGCACTGTAGAGGCTGTGCAAGAAAGGTGGAGAAACACATTTCAAAAATGGAAGGAGTGAGCTCGTACACAATAGACCTGGAG
ACTAAGATGGTGATCATTATTGGGGACATTCTGCCATTTGAAGTGGTGGAGAGTGTCTCTAAAGTCAAAAACGCACAGCTCTGGCAATCCTCGCTAGCTTGA
mRNA sequenceShow/hide mRNA sequence
GTCAATCCAATAATTGAAGCTCCATCGTCTTCATCACTGCCACTATATTTATATAATATTTGATGAAGGACAAGAACAAGTCTGTCAGCTCAACAGTCCCGTCACCCGCA
GGTGGGCGGTGCCAAAACCCTCTGCTTTTTGCTTCCTTCCTGCTCTGTTCTATTCAACTCCAACAATCATTTTATTGAATTATGTATTATAAATTTGGGGGCAGCCCAGG
TGAGAGGCATTACATATTTGGGTGCCTTTAAATTCCCGGATTTTGCTCTAAATACCGTAAAGGTTCCACCTTTTTTCCTACTTTAAATACACTTGCGCATTCCACCTGCC
ACTCTCCCAAATTCCTCACTGAGATAGCCATGGACACACTTGAAGGGTGTCCCTGAAATTTACCAAGATTCTTGTTGTGATCATGGGGAAGCTGCACAAGAAAATTTCAA
AGGCGTTGGACTGTTTTAGTCTTAGTCTTGGTCCCTCCTCTTGTAGCTCAGGCTCTTGTTTTTGCATAAACTCCATGGAAGAGCAGGAAGATGAGTTTGATAAACTGCCC
CTCATATCCACTCACAAAGACCAGCTGCCCACGTTGAAGGACGTTGTCAATGGAAACCAGACCTTGGCCTTTCAACTCAAGCCCAAGATGGTGACTCTAAGGGTATCCAT
GCACTGTAGAGGCTGTGCAAGAAAGGTGGAGAAACACATTTCAAAAATGGAAGGAGTGAGCTCGTACACAATAGACCTGGAGACTAAGATGGTGATCATTATTGGGGACA
TTCTGCCATTTGAAGTGGTGGAGAGTGTCTCTAAAGTCAAAAACGCACAGCTCTGGCAATCCTCGCTAGCTTGATCATTATTCCATATGAACAACACCATTATTAATTAA
ATGTGTACATCGTTGGAAGACAGGGGGATCGGAATTTGGCAGAGAATATTTTTTATTCTCACTAATTTTGTGCTTTTTTTCTTTTAATTTCCGTATTCTATATGTTTATT
CACCGGAAGTGGTGTGATTTATAGGAATTTAATGAAAATTAAATTTGATGACACAGAATATATATATATAGCGATTAAAATAAAATAAATAAGGAAGACAAATATAAAGA
TAAGAGTTAGCATAGAAAATGTAAATGCAGATGAAAAATAAATAAAATATTTAATACGTA
Protein sequenceShow/hide protein sequence
MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGVSSYTIDLE
TKMVIIIGDILPFEVVESVSKVKNAQLWQSSLA