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CmoCh11G006030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G006030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGolgin subfamily A member 4
Genome locationCmo_Chr11:2911179..2912807
RNA-Seq ExpressionCmoCh11G006030
SyntenyCmoCh11G006030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653121.1 hypothetical protein Csa_019717, partial [Cucumis sativus]1.5e-2266Show/hide
Query:  KNSSKQTIRLGRWR--SGYQPNLWKLLWRKLRREKR------NKTTTYSSG-NFIPYDPFSYSQNFDQGNATEEPDILCRSFSARFALADAASAFFLDNQ
        +   + TIRLG WR  +  QPN+WK+LWRKLRREKR      N TT YSSG   IPYDPFSYSQNFDQG A EE D L RSFSARFALAD ASA FL  Q
Subjt:  KNSSKQTIRLGRWR--SGYQPNLWKLLWRKLRREKR------NKTTTYSSG-NFIPYDPFSYSQNFDQGNATEEPDILCRSFSARFALADAASAFFLDNQ
KAG5009349.1 hypothetical protein JHK87_017864 [Glycine soja]3.2e-0957.89Show/hide
Query:  WKLLWRKLRREKRNKTTTYSSGNFIPYDPFSYSQNFDQGNATEEPDILCRSFSARFA
        WK+LW KL++EK+    + SS   +PYDP++YSQNFDQG A +EPD   RSFS RFA
Subjt:  WKLLWRKLRREKRNKTTTYSSGNFIPYDPFSYSQNFDQGNATEEPDILCRSFSARFA
KAG6587950.1 hypothetical protein SDJN03_16515, partial [Cucurbita argyrosperma subsp. sororia]8.5e-11184.15Show/hide
Query:  MESLRLQNGRISSLWTYTNIRAIHLADRDQNHNCIHRKTFTFQDIIVPHELSSSAPPKRTHSDAACNETTPDALSASTSNACSPTHRHCCYSQPPTLPAR
        MESLRLQNGRISSLWTYTNIR+IHLADRDQNHNCIHRKTFTFQDIIVPHELSSSAPPKRTH DAACNETTPDA SASTS A SPTHRHCCYSQP  LPAR
Subjt:  MESLRLQNGRISSLWTYTNIRAIHLADRDQNHNCIHRKTFTFQDIIVPHELSSSAPPKRTHSDAACNETTPDALSASTSNACSPTHRHCCYSQPPTLPAR

Query:  GPNCFAHPKAPSGLPAKAVNH--------------------------VALMMGKNSSKQTIRLGRWRSGYQPNLWKLLWRKLRREKRNKTTTYSSGNFIP
        GPNCFAHPKAPSGLPAKAVNH                           ALMMGK SSKQTIRLGRWRSGYQPNLWK+LWRKLRREKRNKTTTYSSGN IP
Subjt:  GPNCFAHPKAPSGLPAKAVNH--------------------------VALMMGKNSSKQTIRLGRWRSGYQPNLWKLLWRKLRREKRNKTTTYSSGNFIP

Query:  YDPFSYSQNFDQGNATEEPDILCRSFSARFALADAASAFFLDNQLQ
        YDPFSYS NFDQGNA EEPDILCRSFSARFALADAASAFFLDNQLQ
Subjt:  YDPFSYSQNFDQGNATEEPDILCRSFSARFALADAASAFFLDNQLQ
KAG7021839.1 hypothetical protein SDJN02_15567, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-11184.15Show/hide
Query:  MESLRLQNGRISSLWTYTNIRAIHLADRDQNHNCIHRKTFTFQDIIVPHELSSSAPPKRTHSDAACNETTPDALSASTSNACSPTHRHCCYSQPPTLPAR
        MESLRLQNGRISSLWTYTNIRAIHLADRDQNHNCIHRKTFTFQDIIVPHELSSSAPPKRTH DAACNETTPDA SASTS A SPTHRHCCYSQP  LPAR
Subjt:  MESLRLQNGRISSLWTYTNIRAIHLADRDQNHNCIHRKTFTFQDIIVPHELSSSAPPKRTHSDAACNETTPDALSASTSNACSPTHRHCCYSQPPTLPAR

Query:  GPNCFAHPKAPSGLPAKAVNH--------------------------VALMMGKNSSKQTIRLGRWRSGYQPNLWKLLWRKLRREKRNKTTTYSSGNFIP
        GPNCFAHPKAPSGLPAKAVNH                           ALMMGK SSKQTIRLGRWRSGYQPNLWKLLWRKLRR+KRNKTTTYSSGN IP
Subjt:  GPNCFAHPKAPSGLPAKAVNH--------------------------VALMMGKNSSKQTIRLGRWRSGYQPNLWKLLWRKLRREKRNKTTTYSSGNFIP

Query:  YDPFSYSQNFDQGNATEEPDILCRSFSARFALADAASAFFLDNQLQ
        YDPFSYS NFDQGNA E+PDILCRSFSARFALADAASAFFLDNQLQ
Subjt:  YDPFSYSQNFDQGNATEEPDILCRSFSARFALADAASAFFLDNQLQ
OUZ99926.1 hypothetical protein BVC80_9069g34 [Macleaya cordata]1.9e-0952.78Show/hide
Query:  TIRLGRWRSGYQPNLWKLLWRKLRREKRNKTTTYSSGNFIPYDPFSYSQNFDQGNATEEPDILCRSFSARFA
        T+ L   RS   P  W+LLWRK+++EK+    + S    +PYDP++YSQNFD G+A  EPD L RSFSARFA
Subjt:  TIRLGRWRSGYQPNLWKLLWRKLRREKRNKTTTYSSGNFIPYDPFSYSQNFDQGNATEEPDILCRSFSARFA
TrEMBL top hitse value%identityAlignment
A0A0A0LWX3 Uncharacterized protein7.2e-2366Show/hide
Query:  KNSSKQTIRLGRWR--SGYQPNLWKLLWRKLRREKR------NKTTTYSSG-NFIPYDPFSYSQNFDQGNATEEPDILCRSFSARFALADAASAFFLDNQ
        +   + TIRLG WR  +  QPN+WK+LWRKLRREKR      N TT YSSG   IPYDPFSYSQNFDQG A EE D L RSFSARFALAD ASA FL  Q
Subjt:  KNSSKQTIRLGRWR--SGYQPNLWKLLWRKLRREKR------NKTTTYSSG-NFIPYDPFSYSQNFDQGNATEEPDILCRSFSARFALADAASAFFLDNQ
A0A200PNY2 Uncharacterized protein9.1e-1052.78Show/hide
Query:  TIRLGRWRSGYQPNLWKLLWRKLRREKRNKTTTYSSGNFIPYDPFSYSQNFDQGNATEEPDILCRSFSARFA
        T+ L   RS   P  W+LLWRK+++EK+    + S    +PYDP++YSQNFD G+A  EPD L RSFSARFA
Subjt:  TIRLGRWRSGYQPNLWKLLWRKLRREKRNKTTTYSSGNFIPYDPFSYSQNFDQGNATEEPDILCRSFSARFA
A0A4D6LA15 Uncharacterized protein2.0e-0948.84Show/hide
Query:  KNSSKQTIRLGRWRSGYQ------PNL-WKLLWRKLRREKRNKTTTYSSGNF-IPYDPFSYSQNFDQGNATEEPDILCRSFSARFA
        +NS K+ I LGR     +      P L WKLLW K+++EK+     + S +F +PYD  +YSQNFDQG A +EPD L RSFS RFA
Subjt:  KNSSKQTIRLGRWRSGYQ------PNL-WKLLWRKLRREKRNKTTTYSSGNF-IPYDPFSYSQNFDQGNATEEPDILCRSFSARFA
I1KIS1 Uncharacterized protein1.6e-0957.89Show/hide
Query:  WKLLWRKLRREKRNKTTTYSSGNFIPYDPFSYSQNFDQGNATEEPDILCRSFSARFA
        WK+LW KL++EK+    + SS   +PYDP++YSQNFDQG A +EPD   RSFS RFA
Subjt:  WKLLWRKLRREKRNKTTTYSSGNFIPYDPFSYSQNFDQGNATEEPDILCRSFSARFA
V7CQ59 Uncharacterized protein1.6e-0950Show/hide
Query:  KNSSKQTIRLGRWRSGYQPN--LWKLLWRKLRREKRNKTTTYSSGNFIPYDPFSYSQNFDQGNATEEPDILCRSFSARFA
        +NS K+T+ LGR           WKLLW K++REK+    + +S   +PYD  +YSQNFDQG A +EPD L RSFS RFA
Subjt:  KNSSKQTIRLGRWRSGYQPN--LWKLLWRKLRREKRNKTTTYSSGNFIPYDPFSYSQNFDQGNATEEPDILCRSFSARFA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25735.1 unknown protein1.5e-0433.33Show/hide
Query:  HVALMMGKNSSKQTIRLGRWRSGYQPN-----------LWKLLWRKLRREKRNKTTTYSSGNFIPYDPFSYSQNFDQG---NATEEPDILCRSFSARFA
        +V ++   +S ++TI LGR+    +              WK+L  KL+       +  SS   + Y+P  YS NFDQG   +  +EP+ L RSFS RFA
Subjt:  HVALMMGKNSSKQTIRLGRWRSGYQPN-----------LWKLLWRKLRREKRNKTTTYSSGNFIPYDPFSYSQNFDQG---NATEEPDILCRSFSARFA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCTTACGACTTCAAAATGGACGGATTTCGTCCTTATGGACATACACAAACATTCGGGCGATTCATTTGGCCGACAGAGACCAGAACCACAATTGTATTCATAG
AAAAACATTCACTTTCCAAGACATCATTGTTCCACACGAGTTGTCTTCATCCGCCCCACCCAAACGTACTCACTCCGATGCAGCCTGCAACGAAACGACCCCGGATGCCC
TGTCGGCGAGCACAAGCAACGCCTGTTCGCCGACCCACCGCCACTGCTGCTACTCCCAGCCGCCGACGCTGCCTGCAAGAGGACCCAATTGCTTTGCACACCCAAAAGCT
CCCTCCGGCTTACCAGCCAAGGCCGTAAATCATGTGGCTTTGATGATGGGAAAGAACAGCAGCAAACAAACCATCAGATTGGGGCGATGGAGAAGCGGGTACCAACCCAA
TCTGTGGAAGCTGTTATGGAGGAAACTGAGAAGAGAAAAGAGGAACAAAACCACGACGTATTCCTCAGGGAACTTCATTCCTTATGATCCTTTCTCTTATTCACAGAATT
TCGACCAAGGCAACGCTACCGAAGAGCCCGATATTCTTTGCCGCTCCTTCTCCGCCCGCTTTGCCCTCGCCGATGCTGCTTCCGCCTTCTTTCTTGACAACCAGCTTCAA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCTTACGACTTCAAAATGGACGGATTTCGTCCTTATGGACATACACAAACATTCGGGCGATTCATTTGGCCGACAGAGACCAGAACCACAATTGTATTCATAG
AAAAACATTCACTTTCCAAGACATCATTGTTCCACACGAGTTGTCTTCATCCGCCCCACCCAAACGTACTCACTCCGATGCAGCCTGCAACGAAACGACCCCGGATGCCC
TGTCGGCGAGCACAAGCAACGCCTGTTCGCCGACCCACCGCCACTGCTGCTACTCCCAGCCGCCGACGCTGCCTGCAAGAGGACCCAATTGCTTTGCACACCCAAAAGCT
CCCTCCGGCTTACCAGCCAAGGCCGTAAATCATGTGGCTTTGATGATGGGAAAGAACAGCAGCAAACAAACCATCAGATTGGGGCGATGGAGAAGCGGGTACCAACCCAA
TCTGTGGAAGCTGTTATGGAGGAAACTGAGAAGAGAAAAGAGGAACAAAACCACGACGTATTCCTCAGGGAACTTCATTCCTTATGATCCTTTCTCTTATTCACAGAATT
TCGACCAAGGCAACGCTACCGAAGAGCCCGATATTCTTTGCCGCTCCTTCTCCGCCCGCTTTGCCCTCGCCGATGCTGCTTCCGCCTTCTTTCTTGACAACCAGCTTCAA
TAA
Protein sequenceShow/hide protein sequence
MESLRLQNGRISSLWTYTNIRAIHLADRDQNHNCIHRKTFTFQDIIVPHELSSSAPPKRTHSDAACNETTPDALSASTSNACSPTHRHCCYSQPPTLPARGPNCFAHPKA
PSGLPAKAVNHVALMMGKNSSKQTIRLGRWRSGYQPNLWKLLWRKLRREKRNKTTTYSSGNFIPYDPFSYSQNFDQGNATEEPDILCRSFSARFALADAASAFFLDNQLQ