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CmoCh11G006040 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G006040
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionserine-rich protein-related
Genome locationCmo_Chr11:2912432..2914533
RNA-Seq ExpressionCmoCh11G006040
SyntenyCmoCh11G006040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046597.1 hypothetical protein E6C27_scaffold114G001380 [Cucumis melo var. makuwa]5.2e-1057.14Show/hide
Query:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASA----AGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSE
        MCYPH   P    R + L  Q NWVL Q   A    A   S G  S  RRCLCSPT HPGSFRCRLHRSE
Subjt:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASA----AGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSE

KAG6589902.1 hypothetical protein SDJN03_15325, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1468.18Show/hide
Query:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASAAGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSE
        MCYPHD+ P    RRE L VQ NWVLLQ A+ A   S GG S  +RCLCSPT HPGSFRCRLHRSE
Subjt:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASAAGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSE

KAG7021840.1 hypothetical protein SDJN02_15568 [Cucurbita argyrosperma subsp. argyrosperma]8.6e-2983.75Show/hide
Query:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASAAGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSEIKKWVLNIQWVTHK
        MCYPHDLRPWLVSRRELLGVQSNWVLLQAASAAGSSS+GGGSA  RCLCSPTGHPG          IKKWVLNIQWVTHK
Subjt:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASAAGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSEIKKWVLNIQWVTHK

KGN65356.1 hypothetical protein Csa_020011 [Cucumis sativus]8.9e-1054.29Show/hide
Query:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASAAGSS----SSGGGSANRRCLCSPTGHPGSFRCRLHRSE
        MCYPH      +SRR+   +Q NWVL Q   A  ++    S G  S  RRCLCSPT HPGSFRCRLHR+E
Subjt:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASAAGSS----SSGGGSANRRCLCSPTGHPGSFRCRLHRSE

TXG61376.1 hypothetical protein EZV62_012739 [Acer yangbiense]9.2e-0744.59Show/hide
Query:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASA--------AGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSE
        MCYP      LV RR L+ VQ  W +LQ ++A        AG + +GG    ++C+CSPT HPGSFRCR H ++
Subjt:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASA--------AGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSE

TrEMBL top hitse value%identityAlignment
A0A0A0LZG6 Uncharacterized protein4.3e-1054.29Show/hide
Query:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASAAGSS----SSGGGSANRRCLCSPTGHPGSFRCRLHRSE
        MCYPH      +SRR+   +Q NWVL Q   A  ++    S G  S  RRCLCSPT HPGSFRCRLHR+E
Subjt:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASAAGSS----SSGGGSANRRCLCSPTGHPGSFRCRLHRSE

A0A2G9H0N0 Uncharacterized protein8.4e-0643.24Show/hide
Query:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASAAGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSEIKKWVLNI
        MCYP D       RR    V   W  L   SA  ++  GGG+  + C+CSPT HPGSFRCR H  E  +WV  +
Subjt:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASAAGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSEIKKWVLNI

A0A498HUV8 Uncharacterized protein1.9e-0541.86Show/hide
Query:  MCYPHDLRPWLVSRR----ELLGVQSNWVLLQ----------------AASAAGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSE
        MC+P  + P  V RR     +L     W+LL+                AA   G +++GGG   RRCLCSPT HPGSFRCR HR+E
Subjt:  MCYPHDLRPWLVSRR----ELLGVQSNWVLLQ----------------AASAAGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSE

A0A5A7TXE6 Uncharacterized protein2.5e-1057.14Show/hide
Query:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASA----AGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSE
        MCYPH   P    R + L  Q NWVL Q   A    A   S G  S  RRCLCSPT HPGSFRCRLHRSE
Subjt:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASA----AGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSE

A0A5C7HYH3 Uncharacterized protein4.5e-0744.59Show/hide
Query:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASA--------AGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSE
        MCYP      LV RR L+ VQ  W +LQ ++A        AG + +GG    ++C+CSPT HPGSFRCR H ++
Subjt:  MCYPHDLRPWLVSRRELLGVQSNWVLLQAASA--------AGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67910.1 unknown protein5.4e-0589.47Show/hide
Query:  CLCSPTGHPGSFRCRLHRS
        CLCSPT HPGSFRCR+HRS
Subjt:  CLCSPTGHPGSFRCRLHRS

AT1G67910.2 unknown protein5.4e-0589.47Show/hide
Query:  CLCSPTGHPGSFRCRLHRS
        CLCSPT HPGSFRCR+HRS
Subjt:  CLCSPTGHPGSFRCRLHRS

AT5G11090.1 serine-rich protein-related7.0e-0572.73Show/hide
Query:  NRRCLCSPTGHPGSFRCRLHRS
        +RRC+CSPT HPGSFRC LH++
Subjt:  NRRCLCSPTGHPGSFRCRLHRS

AT5G25280.1 serine-rich protein-related9.2e-0569.57Show/hide
Query:  ANRRCLCSPTGHPGSFRCRLHRS
        + RRC+CSPT HPGSFRC LH++
Subjt:  ANRRCLCSPTGHPGSFRCRLHRS

AT5G25280.2 serine-rich protein-related9.2e-0569.57Show/hide
Query:  ANRRCLCSPTGHPGSFRCRLHRS
        + RRC+CSPT HPGSFRC LH++
Subjt:  ANRRCLCSPTGHPGSFRCRLHRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTACCCACATGATTTACGGCCTTGGCTGGTAAGCCGGAGGGAGCTTTTGGGTGTGCAAAGCAATTGGGTCCTCTTGCAGGCAGCGTCGGCGGCTGGGAGTAGCAG
CAGTGGCGGTGGGTCGGCGAACAGGCGTTGCTTGTGCTCGCCGACAGGGCATCCGGGGTCGTTTCGTTGCAGGCTGCATCGGAGTGAGATCAAGAAATGGGTTCTAAACA
TTCAATGGGTCACCCACAAAAATGAAAATCAAGATTACCTTAATGGGGAATTTGATAAAGAAAAACCCCATGAATCCTTCGACTTCCGTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTACCCACATGATTTACGGCCTTGGCTGGTAAGCCGGAGGGAGCTTTTGGGTGTGCAAAGCAATTGGGTCCTCTTGCAGGCAGCGTCGGCGGCTGGGAGTAGCAG
CAGTGGCGGTGGGTCGGCGAACAGGCGTTGCTTGTGCTCGCCGACAGGGCATCCGGGGTCGTTTCGTTGCAGGCTGCATCGGAGTGAGATCAAGAAATGGGTTCTAAACA
TTCAATGGGTCACCCACAAAAATGAAAATCAAGATTACCTTAATGGGGAATTTGATAAAGAAAAACCCCATGAATCCTTCGACTTCCGTCTTTGA
Protein sequenceShow/hide protein sequence
MCYPHDLRPWLVSRRELLGVQSNWVLLQAASAAGSSSSGGGSANRRCLCSPTGHPGSFRCRLHRSEIKKWVLNIQWVTHKNENQDYLNGEFDKEKPHESFDFRL