; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G006090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G006090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCoiled-coil domain-containing protein 9-like
Genome locationCmo_Chr11:2923425..2926338
RNA-Seq ExpressionCmoCh11G006090
SyntenyCmoCh11G006090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589907.1 hypothetical protein SDJN03_15330, partial [Cucurbita argyrosperma subsp. sororia]1.4e-6476.73Show/hide
Query:  MASICPFSSKTLVLPSAAYLPV-SSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFS
        MASIC  SSKTLVLPSAAYLP+ SSSSTSHS C  GCR SFP++PI+ SNLI+ RRRTGR VVRMAPEEEK+TRRNPLDFPIEW+RPKPGRRPDIFPQFS
Subjt:  MASICPFSSKTLVLPSAAYLPV-SSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFS

Query:  PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQDEGQLNQVPVSAVDDLQLLSGASFLAFSLFEGSSIGRASALASSLIQLMNLTPFLFR
        PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ+  +  QVPV+AVDDLQL S       SL    S G    L   L +LMNLTP LFR
Subjt:  PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQDEGQLNQVPVSAVDDLQLLSGASFLAFSLFEGSSIGRASALASSLIQLMNLTPFLFR

Query:  SL
        SL
Subjt:  SL

XP_022933792.1 uncharacterized protein LOC111441100 [Cucurbita moschata]4.2e-69100Show/hide
Query:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP
        MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP
Subjt:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

XP_022965880.1 uncharacterized protein LOC111465629 [Cucurbita maxima]1.2e-6697.89Show/hide
Query:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP
        MASIC FSSKTLVLPSAAYL VSSSSTSHSFCVRGCRCSFPNRPIANSNLIIG+RRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP
Subjt:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

XP_023530781.1 uncharacterized protein LOC111793229 [Cucurbita pepo subsp. pepo]6.1e-6899.3Show/hide
Query:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP
        MASIC FSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP
Subjt:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

XP_038879472.1 uncharacterized protein LOC120071334 [Benincasa hispida]1.2e-6090.14Show/hide
Query:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP
        MASI  FSSKTLVLPSA YLP+SSSST+H+ C  GCRCSFPN+PI+ SNLIIGRRRTGR VVRMAPEEEKLTRRNPLDFPIEW+RPKPGRRPDIFPQFSP
Subjt:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

TrEMBL top hitse value%identityAlignment
A0A6J1CVD6 uncharacterized protein LOC1110145609.0e-5785.71Show/hide
Query:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP
        MASIC FSSKTL LPSA YL +SSSSTSHS     CRCSFP +P++NS+L+IGRRRTG+ VVRMAP+EEKLTRRNPLDFPIEW+RPKPGRRPDIFPQFSP
Subjt:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE

A0A6J1F0T5 uncharacterized protein LOC1114411002.1e-69100Show/hide
Query:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP
        MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP
Subjt:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

A0A6J1HA36 uncharacterized protein LOC111461515 isoform X11.8e-5787.41Show/hide
Query:  MASICPFSSKTLVLPSAAYLPV-SSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFS
        MASIC  SSKTLVLPSAAYLP+ SSSST+HS C  GCR SFP++PI+ SNLI+ RRRTGR VVRMAPEEEK+TRRNPLDFPIEW+RPKPGRRPDIFPQFS
Subjt:  MASICPFSSKTLVLPSAAYLPV-SSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFS

Query:  PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  PMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

A0A6J1HQ01 uncharacterized protein LOC1114656295.6e-6797.89Show/hide
Query:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP
        MASIC FSSKTLVLPSAAYL VSSSSTSHSFCVRGCRCSFPNRPIANSNLIIG+RRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP
Subjt:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

A0A6J1JI28 uncharacterized protein LOC111485300 isoform X13.3e-5989.44Show/hide
Query:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP
        MASIC  SSKTL LPSAAYLP+SSSSTSHS C  GCR SFPN+PI  SNLII RRRTGR VVRMAPEEEK+TRRNPLDFPIEW+RPKPGRRPDIFPQFSP
Subjt:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSP

Query:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Subjt:  MKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G17240.1 unknown protein3.1e-3363.45Show/hide
Query:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGR---LVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQ
        MAS+C  S++ L  PS   L + S+ T  S   R   CS  +R  A S++     R  R    VV MAPEEEKLTRRNPLDFPIEW+RPKPGRRPDIFP+
Subjt:  MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGR---LVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQ

Query:  FSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
        FSPMKTPLPPP+P DPPEEDEEEEEKKEEEEENPD+E  ++PEKQ
Subjt:  FSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

AT3G24506.1 unknown protein1.0e-2860.15Show/hide
Query:  PVSSSSTSH---------SFCVRGCRCSFPNRPIANSNLIIGRRRTGRL-VVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSPMKTPLPPPLP
        P+SSSS +          S    G  CSF    IA     + R+   +L VV MAPEEEKLTRRNPLDFPIEW+RPKPGRRPDIFP+FSPMK+PLPPP+P
Subjt:  PVSSSSTSH---------SFCVRGCRCSFPNRPIANSNLIIGRRRTGRL-VVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSPMKTPLPPPLP

Query:  CDPPEEDEEEEEKKEEE-EENPDKENPDEPEKQ
         DPPEE+EEEEEKKEEE E++P+KE+ D+P+ +
Subjt:  CDPPEEDEEEEEKKEEE-EENPDKENPDEPEKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGATTTGCCCGTTCAGTTCTAAAACCCTAGTTTTGCCGTCGGCGGCCTACCTACCAGTATCCTCCTCATCTACAAGCCATAGTTTCTGTGTTCGTGGCTGCAG
ATGCTCTTTCCCAAACAGGCCAATTGCGAATTCTAATTTGATAATTGGGAGAAGGAGAACGGGGAGGCTGGTGGTTCGAATGGCCCCGGAGGAAGAGAAACTTACTCGTC
GCAATCCTCTCGATTTCCCGATTGAGTGGGATAGGCCTAAGCCAGGTCGTAGACCAGACATCTTTCCTCAATTTAGCCCCATGAAAACACCATTGCCACCACCATTGCCA
TGCGATCCCCCTGAAGAAGACGAAGAGGAGGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCTGATGAGCCTGAGAAGCAGGATGAAGGGCAGTT
GAATCAGGTCCCAGTGTCAGCAGTTGATGATTTGCAGCTTCTTTCAGGTGCTTCCTTTCTCGCTTTCTCTCTATTTGAAGGATCATCCATCGGCAGAGCATCTGCTTTGG
CTTCCTCTCTTATTCAACTCATGAATCTTACTCCATTTCTGTTCAGGTCACTGGTAAGGCTGCTGCTATCGCTAATTGTCCAGCCTGTAGCCTCTGTCTCAACCTTGCTT
TTTTACAGTGACGTTCTCCCTCAGCATATGGTTTCGGAGAGATTGGTTCGTCATGAACTTCTTGACCGCGAAAACTACCTATTCCATTTTCTCGTCAACTTTTTGAAGTG
CTTTTGGTGA
mRNA sequenceShow/hide mRNA sequence
CTATTTGATTTTCGGGAGAAGAAAACAAGAGGCGTTTGTGGCGGCTATTTGATTTTGGGGAATCGGCCACCACAATTTTCACTCGGTCCCGACCTGACGAGGAGGATTCA
CTGCAGGGGAAGAGAAAGATCATGGCGTCGATTTGCCCGTTCAGTTCTAAAACCCTAGTTTTGCCGTCGGCGGCCTACCTACCAGTATCCTCCTCATCTACAAGCCATAG
TTTCTGTGTTCGTGGCTGCAGATGCTCTTTCCCAAACAGGCCAATTGCGAATTCTAATTTGATAATTGGGAGAAGGAGAACGGGGAGGCTGGTGGTTCGAATGGCCCCGG
AGGAAGAGAAACTTACTCGTCGCAATCCTCTCGATTTCCCGATTGAGTGGGATAGGCCTAAGCCAGGTCGTAGACCAGACATCTTTCCTCAATTTAGCCCCATGAAAACA
CCATTGCCACCACCATTGCCATGCGATCCCCCTGAAGAAGACGAAGAGGAGGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCTGATGAGCCTGA
GAAGCAGGATGAAGGGCAGTTGAATCAGGTCCCAGTGTCAGCAGTTGATGATTTGCAGCTTCTTTCAGGTGCTTCCTTTCTCGCTTTCTCTCTATTTGAAGGATCATCCA
TCGGCAGAGCATCTGCTTTGGCTTCCTCTCTTATTCAACTCATGAATCTTACTCCATTTCTGTTCAGGTCACTGGTAAGGCTGCTGCTATCGCTAATTGTCCAGCCTGTA
GCCTCTGTCTCAACCTTGCTTTTTTACAGTGACGTTCTCCCTCAGCATATGGTTTCGGAGAGATTGGTTCGTCATGAACTTCTTGACCGCGAAAACTACCTATTCCATTT
TCTCGTCAACTTTTTGAAGTGCTTTTGGTGAAGAAAGAAGAAGATGATGATAAGGGCACATCTTTTTCAGCGACCCATTTCATGAATTTTCCCCCTCGACATCCGGCCTT
TCTGATGCCATTGGAGCACTATTTTGAAGGTTATTTCTCAAAAACTACTTTGCTTGGGACTGAAAATTGCAATAAAATGATATTATGTTTCTTGCTTTCACTGTTGTCAT
TAGGTAAATGCTTCTTTCTTGTTCATAATTTCTTAGTGCTGTGTCCACTCCCCCA
Protein sequenceShow/hide protein sequence
MASICPFSSKTLVLPSAAYLPVSSSSTSHSFCVRGCRCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFPQFSPMKTPLPPPLP
CDPPEEDEEEEEKKEEEEENPDKENPDEPEKQDEGQLNQVPVSAVDDLQLLSGASFLAFSLFEGSSIGRASALASSLIQLMNLTPFLFRSLVRLLLSLIVQPVASVSTLL
FYSDVLPQHMVSERLVRHELLDRENYLFHFLVNFLKCFW