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CmoCh11G006140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G006140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr11:2941132..2941686
RNA-Seq ExpressionCmoCh11G006140
SyntenyCmoCh11G006140
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587958.1 hypothetical protein SDJN03_16523, partial [Cucurbita argyrosperma subsp. sororia]1.6e-9498.37Show/hide
Query:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR
        MFLLPSISTTKKFF+KTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKD+VQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR
Subjt:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR

Query:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI
        ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNV HSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI
Subjt:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI

KAG6589911.1 hypothetical protein SDJN03_15334, partial [Cucurbita argyrosperma subsp. sororia]4.4e-6071.74Show/hide
Query:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR
        M L  SI+ TKKFF KTLCNFKSFFSNTY RLPKA PPPF+ G EM KD     SF K+   NAV FSKT+D+TQM +VEKNE SIKIG THQRKTQEN 
Subjt:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR

Query:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI
                 L EYDERR+CLVAKK+KELEKLDAR+V H+LDIEEILHYYSRL+CPTYLEIVD FFMD+FAEFC+NSSS Q N I
Subjt:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI

XP_022933508.1 uncharacterized protein LOC111440909 [Cucurbita moschata]2.2e-96100Show/hide
Query:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR
        MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR
Subjt:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR

Query:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI
        ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI
Subjt:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI

XP_022960595.1 uncharacterized protein LOC111461329 [Cucurbita moschata]2.0e-6071.74Show/hide
Query:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR
        M L  SI+ TKKFF KTLCNFKSFFSNTY RLPKA PPPF+ G EM KD     SF K++  NAV FSKT+D+TQM +VEKNE SIKIG THQRKTQEN 
Subjt:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR

Query:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI
                 L EYDERR+CLVAKK+KELEKLDAR+V H+LDIEEILHYYSRL+CPTYLEIVD FFMD+FAEFC+NSSS Q N I
Subjt:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI

XP_022973644.1 uncharacterized protein LOC111472233 [Cucurbita maxima]5.3e-9095.65Show/hide
Query:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR
        MFLLPSISTTKKFF+KT+CNFKSFFSNTYHRLPKA  PPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRK+QENR
Subjt:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR

Query:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI
        ESRSKRS RLYEYDERRVCLVAKKIKELEKLDARNV HSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ NKI
Subjt:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI

TrEMBL top hitse value%identityAlignment
A0A6J1CV44 uncharacterized protein LOC1110145444.0e-5163.87Show/hide
Query:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKD----------EVQNGSFTKSNGNNAVHFSKTIDKTQMD--RVEKNEQSI-K
        M L  SIS TKKFF+KT+CNFKSFFS +YHRLPK  PPPF AGP M KD          EVQ+G F K+N +NA+HF   +++TQM+   V+K+  S+  
Subjt:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKD----------EVQNGSFTKSNGNNAVHFSKTIDKTQMD--RVEKNEQSI-K

Query:  IGATHQRKTQENRESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSS
        IGATHQRK QENR+   + SS  Y  DERR+CLVAKKIKELEKLD+RNV H+LDIEEILHYYSRLTCP YLEIVD FF ++FAEF +NSSS
Subjt:  IGATHQRKTQENRESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSS

A0A6J1F4Y2 uncharacterized protein LOC1114409091.1e-96100Show/hide
Query:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR
        MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR
Subjt:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR

Query:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI
        ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI
Subjt:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI

A0A6J1H9I9 uncharacterized protein LOC1114613299.5e-6171.74Show/hide
Query:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR
        M L  SI+ TKKFF KTLCNFKSFFSNTY RLPKA PPPF+ G EM KD     SF K++  NAV FSKT+D+TQM +VEKNE SIKIG THQRKTQEN 
Subjt:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR

Query:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI
                 L EYDERR+CLVAKK+KELEKLDAR+V H+LDIEEILHYYSRL+CPTYLEIVD FFMD+FAEFC+NSSS Q N I
Subjt:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI

A0A6J1IF62 uncharacterized protein LOC1114722332.6e-9095.65Show/hide
Query:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR
        MFLLPSISTTKKFF+KT+CNFKSFFSNTYHRLPKA  PPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRK+QENR
Subjt:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR

Query:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI
        ESRSKRS RLYEYDERRVCLVAKKIKELEKLDARNV HSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ NKI
Subjt:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI

A0A6J1JFL9 uncharacterized protein LOC1114852927.8e-5567.93Show/hide
Query:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR
        M L  SIS+TKKFF KTLCNFKSFFSNTY RLPK           M KD     SF K++  NAVHFSKTI +TQM +VEKNE SIKIGATHQRKTQEN 
Subjt:  MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENR

Query:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI
                 L  YDERR+CLVAKK+KELEKLDAR+V H+LDIEEILHYYSRL+CPTYL+IVD FFMD+FAEFC+N SS Q N I
Subjt:  ESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15260.1 unknown protein1.2e-1029.44Show/hide
Query:  SISTTKKFFQKTLCNFKS-FFSNTYHRLPKAPP--PPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRES
        SI    +F +KTL + KS   S+ Y  LP   P   P++      +D     S T++  +  V    T                    THQ+      + 
Subjt:  SISTTKKFFQKTLCNFKS-FFSNTYHRLPKAPP--PPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRES

Query:  RSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQN
        + K+ +  +E  ++R   +A+K+K+L  +D R+V H+LD+ E L  YS +  P YL+IVD FF DM+ EF    +S++ N
Subjt:  RSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQN

AT3G16070.1 unknown protein2.4e-0829.09Show/hide
Query:  TKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSN---GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRE-SRSK
        T  FF +TL + KS       +LP+ P   F+             +F +SN   G+N   ++  ++  + D     E  +K+    + K QE  +  + K
Subjt:  TKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSN---GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRE-SRSK

Query:  RSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFA
        ++     Y  R    + KKI E+   +  ++  +LD+EE LHYYSR++ P YL IVD FF D+++
Subjt:  RSSRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFA

AT3G24535.1 unknown protein1.2e-1233.33Show/hide
Query:  MFLLPSISTTKKFFQKTLCNFKSFFSN--TYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQE
        M L  SIS T+K FQKT+ NFKSFF N  TYH+LPK P                  + T +N NN  H +  I  +    + K  Q          K   
Subjt:  MFLLPSISTTKKFFQKTLCNFKSFFSN--TYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQE

Query:  NRESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNV----HHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCS
         +     R   L  + + +V LV  K+KE+EK+   ++    ++  D+ E LH YSRL    YL++V+ FFM+++++F S
Subjt:  NRESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNV----HHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCTACTACCCTCCATTTCCACCACCAAAAAATTCTTCCAAAAAACCTTATGTAACTTCAAATCTTTCTTCTCCAACACCTACCATCGCCTACCCAAGGCGCCGCC
GCCGCCCTTCACCGCCGGCCCCGAAATGGCTAAGGACGAGGTCCAAAATGGAAGCTTTACGAAGAGTAATGGCAACAATGCAGTTCATTTTTCGAAGACGATCGACAAGA
CCCAGATGGACAGAGTTGAAAAAAATGAACAGAGCATCAAAATTGGAGCGACCCATCAAAGGAAAACCCAAGAAAACAGGGAATCGAGGTCGAAGAGGAGTAGTAGGTTG
TACGAGTACGATGAGAGGAGAGTGTGTTTGGTTGCCAAGAAAATCAAAGAGTTGGAGAAATTAGACGCGAGAAATGTGCATCATAGTTTGGATATTGAAGAGATCCTTCA
TTACTACTCTCGCCTCACTTGTCCAACATACCTCGAAATTGTGGACACATTCTTCATGGACATGTTCGCTGAATTCTGTTCTAACTCCTCGTCTTCTCAACAGAACAAAA
TTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCTACTACCCTCCATTTCCACCACCAAAAAATTCTTCCAAAAAACCTTATGTAACTTCAAATCTTTCTTCTCCAACACCTACCATCGCCTACCCAAGGCGCCGCC
GCCGCCCTTCACCGCCGGCCCCGAAATGGCTAAGGACGAGGTCCAAAATGGAAGCTTTACGAAGAGTAATGGCAACAATGCAGTTCATTTTTCGAAGACGATCGACAAGA
CCCAGATGGACAGAGTTGAAAAAAATGAACAGAGCATCAAAATTGGAGCGACCCATCAAAGGAAAACCCAAGAAAACAGGGAATCGAGGTCGAAGAGGAGTAGTAGGTTG
TACGAGTACGATGAGAGGAGAGTGTGTTTGGTTGCCAAGAAAATCAAAGAGTTGGAGAAATTAGACGCGAGAAATGTGCATCATAGTTTGGATATTGAAGAGATCCTTCA
TTACTACTCTCGCCTCACTTGTCCAACATACCTCGAAATTGTGGACACATTCTTCATGGACATGTTCGCTGAATTCTGTTCTAACTCCTCGTCTTCTCAACAGAACAAAA
TTTGA
Protein sequenceShow/hide protein sequence
MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRL
YEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI