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CmoCh11G007010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G007010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionWD repeat containing protein
Genome locationCmo_Chr11:3379767..3382488
RNA-Seq ExpressionCmoCh11G007010
SyntenyCmoCh11G007010
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588036.1 hypothetical protein SDJN03_16601, partial [Cucurbita argyrosperma subsp. sororia]9.4e-4096.7Show/hide
Query:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIMEIPSTFMI
        MADPRASLSSLSSPPSL PNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMEN+EAEKDLGQLENDGIEKCSDSEIMEIPSTFM+
Subjt:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIMEIPSTFMI

XP_022147677.1 uncharacterized protein LOC111016544 [Momordica charantia]3.5e-1863.44Show/hide
Query:  MADPRASL-SSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMI
        M DPRA L SS S PP L PND LPRRFKV+WRVLLISNFAL+AYMFA+ARKKDLG+M            E D +EK SD E+M  IPST M+
Subjt:  MADPRASL-SSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMI

XP_022926648.1 uncharacterized protein LOC111433716 [Cucurbita moschata]3.8e-4198.9Show/hide
Query:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIMEIPSTFMI
        MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIMEIPSTFM+
Subjt:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIMEIPSTFMI

XP_022968528.1 uncharacterized protein LOC111467730 isoform X1 [Cucurbita maxima]3.6e-3995.6Show/hide
Query:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIMEIPSTFMI
        MADPRASLSSLSSPPSL PNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQME++EAEKDLGQLENDGIEKCSDSEIMEIPSTFM+
Subjt:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIMEIPSTFMI

XP_023530326.1 uncharacterized protein LOC111792930 [Cucurbita pepo subsp. pepo]4.7e-3995.6Show/hide
Query:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIMEIPSTFMI
        MADPRASLSSLSSPPSL PNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMEN+EAEKDLGQLENDGIEKCSDSEIMEIPST M+
Subjt:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIMEIPSTFMI

TrEMBL top hitse value%identityAlignment
A0A0A0M1X9 Uncharacterized protein1.1e-1763.04Show/hide
Query:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMI
        M DPRA L S SS   L PND LP+RFKV+WRVLLISNFALSAYMFASARK            +   QLEND +EK SDSEI+ EIPST M+
Subjt:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMI

A0A1S3BR82 uncharacterized protein LOC1034923208.7e-1557.61Show/hide
Query:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMI
        M   R  L S SS   L PND LP+RFKV+WR+LLISNFALSAYMFASARK            +   +LEND +EK SDSEI+ EIPST M+
Subjt:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMI

A0A6J1D315 uncharacterized protein LOC1110165441.7e-1863.44Show/hide
Query:  MADPRASL-SSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMI
        M DPRA L SS S PP L PND LPRRFKV+WRVLLISNFAL+AYMFA+ARKKDLG+M            E D +EK SD E+M  IPST M+
Subjt:  MADPRASL-SSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIM-EIPSTFMI

A0A6J1EIP0 uncharacterized protein LOC1114337161.9e-4198.9Show/hide
Query:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIMEIPSTFMI
        MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIMEIPSTFM+
Subjt:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIMEIPSTFMI

A0A6J1HYA0 uncharacterized protein LOC111467730 isoform X11.7e-3995.6Show/hide
Query:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIMEIPSTFMI
        MADPRASLSSLSSPPSL PNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQME++EAEKDLGQLENDGIEKCSDSEIMEIPSTFM+
Subjt:  MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIMEIPSTFMI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACCCACGAGCATCACTGTCATCTCTATCTTCACCGCCGTCTTTGCTTCCCAATGATCAGCTACCCAGACGCTTCAAGGTCGTCTGGCGCGTTCTACTAATCTC
CAATTTCGCCCTTTCAGCCTACATGTTTGCAAGTGCAAGGAAGAAAGACTTGGGGCAAATGGAGAATAATGAAGCAGAAAAAGATTTGGGTCAACTGGAAAATGATGGAA
TAGAAAAATGCAGTGATAGTGAAATAATGGAAATACCCTCAACGTTTATGATTTGA
mRNA sequenceShow/hide mRNA sequence
TATGAGGGGGCGTTGCTTGGCGCGCACACGAAGACCGAGTCAAAGCTGCCATCGCCAAGCTGCCCAATTTCGCCACTTTCAATGGCGGACCCACGAGCATCACTGTCATC
TCTATCTTCACCGCCGTCTTTGCTTCCCAATGATCAGCTACCCAGACGCTTCAAGGTCGTCTGGCGCGTTCTACTAATCTCCAATTTCGCCCTTTCAGCCTACATGTTTG
CAAGTGCAAGGAAGAAAGACTTGGGGCAAATGGAGAATAATGAAGCAGAAAAAGATTTGGGTCAACTGGAAAATGATGGAATAGAAAAATGCAGTGATAGTGAAATAATG
GAAATACCCTCAACGTTTATGATTTGA
Protein sequenceShow/hide protein sequence
MADPRASLSSLSSPPSLLPNDQLPRRFKVVWRVLLISNFALSAYMFASARKKDLGQMENNEAEKDLGQLENDGIEKCSDSEIMEIPSTFMI