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CmoCh11G008230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G008230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDNA (Cytosine-5)-methyltransferase CMT3-like
Genome locationCmo_Chr11:4098842..4099180
RNA-Seq ExpressionCmoCh11G008230
SyntenyCmoCh11G008230
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653489.1 hypothetical protein Csa_006929, partial [Cucumis sativus]8.9e-2478.75Show/hide
Query:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGNSYYSHNQTAVGFPWGVG
        S +FSDQWLLATIALII GFLAYA+YDAA+ASASEV QRLV+VSPLLLVV VHWLSLG  GG   Y++N +AVGFPWGVG
Subjt:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGNSYYSHNQTAVGFPWGVG

KAG6588160.1 hypothetical protein SDJN03_16725, partial [Cucurbita argyrosperma subsp. sororia]1.0e-4896.55Show/hide
Query:  MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSL----GGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPW
        MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSL    GGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPW
Subjt:  MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSL----GGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPW

Query:  SAAILLLMLYFFFLTN
        SAAILLLMLYFFFLTN
Subjt:  SAAILLLMLYFFFLTN

OMP03394.1 hypothetical protein COLO4_10451 [Corchorus olitorius]1.1e-1353.06Show/hide
Query:  TRSTTF--SDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGG------GGNSYYSHNQTAVGFPWGVGFLLLLLLF
        +R++TF  S+QWLL T ++++ GFL Y +YDA +A+A+E+LQRL+I+SPLLLVVVVHWLS G        G      H   A G PWGV F+LLLL F
Subjt:  TRSTTF--SDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGG------GGNSYYSHNQTAVGFPWGVGFLLLLLLF

XP_011660097.1 uncharacterized protein LOC105436341 [Cucumis sativus]1.7e-3582.08Show/hide
Query:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAILLLMLY
        S +FSDQWLLATIALII GFLAYA+YDAA+ASASEV QRLV+VSPLLLVV VHWLSLG  GG   Y++N +AVGFPWGVGFLLLLLLFPWS AILLL+LY
Subjt:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAILLLMLY

Query:  FFFLTN
        FFFLTN
Subjt:  FFFLTN

XP_022157357.1 uncharacterized protein LOC111024080 [Momordica charantia]9.8e-3172.32Show/hide
Query:  MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAI
        MAA TRS   S+QWLLAT+ALI  GFLAYAIYDAA+AS +E+ QR+V+VSPLLLVV VHWLS+GGG         Q AVGFPWGVG LLLL+LFPWSAA+
Subjt:  MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAI

Query:  LLLMLYFFFLTN
        LLL+LYFFFLTN
Subjt:  LLLMLYFFFLTN

TrEMBL top hitse value%identityAlignment
A0A0A0M2K2 Uncharacterized protein8.4e-3682.08Show/hide
Query:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAILLLMLY
        S +FSDQWLLATIALII GFLAYA+YDAA+ASASEV QRLV+VSPLLLVV VHWLSLG  GG   Y++N +AVGFPWGVGFLLLLLLFPWS AILLL+LY
Subjt:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAILLLMLY

Query:  FFFLTN
        FFFLTN
Subjt:  FFFLTN

A0A1R3K8K8 Uncharacterized protein5.3e-1453.06Show/hide
Query:  TRSTTF--SDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGG------GGNSYYSHNQTAVGFPWGVGFLLLLLLF
        +R++TF  S+QWLL T ++++ GFL Y +YDA +A+A+E+LQRL+I+SPLLLVVVVHWLS G        G      H   A G PWGV F+LLLL F
Subjt:  TRSTTF--SDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGG------GGNSYYSHNQTAVGFPWGVGFLLLLLLF

A0A5A7TFN5 DNA (Cytosine-5)-methyltransferase CMT3-like8.4e-3682.08Show/hide
Query:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAILLLMLY
        S +FSDQWLLATIALII GFLAYA+YDAA+ASASEV QRLV+VSPLLLVV VHWLSLG  GG   Y++N +AVGFPWGVGFLLLLLLFPWS AILLL+LY
Subjt:  STTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAILLLMLY

Query:  FFFLTN
        FFFLTN
Subjt:  FFFLTN

A0A6J0ZWF5 uncharacterized protein LOC1104127321.5e-1352.48Show/hide
Query:  AAYTRSTTF--SDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGG------GGGNSYYSHNQTAVGFPWGVGFLLLLLL
        A  +RS+TF  S+QWLL T  +++ GFL Y +YDA +A+ASE+LQRL+++SPLLLVVVVHWLS G        G      H   A G PWGV  +LLLL 
Subjt:  AAYTRSTTF--SDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGG------GGGNSYYSHNQTAVGFPWGVGFLLLLLL

Query:  F
        F
Subjt:  F

A0A6J1DUA1 uncharacterized protein LOC1110240804.8e-3172.32Show/hide
Query:  MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAI
        MAA TRS   S+QWLLAT+ALI  GFLAYAIYDAA+AS +E+ QR+V+VSPLLLVV VHWLS+GGG         Q AVGFPWGVG LLLL+LFPWSAA+
Subjt:  MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAI

Query:  LLLMLYFFFLTN
        LLL+LYFFFLTN
Subjt:  LLLMLYFFFLTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCATATACCAGATCAACAACCTTCTCAGACCAATGGCTTCTTGCAACCATAGCTCTTATAATCTCCGGATTCTTAGCCTATGCCATTTACGACGCCGCCATCGC
CTCGGCCTCCGAGGTGTTACAGAGGCTCGTCATCGTCTCGCCCCTGCTTTTGGTCGTTGTCGTTCACTGGCTGTCCCTCGGAGGCGGCGGTGGAAACAGTTACTACAGCC
ATAACCAGACGGCTGTGGGATTTCCATGGGGTGTTGGGTTTCTTTTGCTTTTGCTTCTGTTTCCATGGAGTGCTGCCATTCTTCTTCTTATGCTTTATTTCTTCTTTCTT
ACCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCATATACCAGATCAACAACCTTCTCAGACCAATGGCTTCTTGCAACCATAGCTCTTATAATCTCCGGATTCTTAGCCTATGCCATTTACGACGCCGCCATCGC
CTCGGCCTCCGAGGTGTTACAGAGGCTCGTCATCGTCTCGCCCCTGCTTTTGGTCGTTGTCGTTCACTGGCTGTCCCTCGGAGGCGGCGGTGGAAACAGTTACTACAGCC
ATAACCAGACGGCTGTGGGATTTCCATGGGGTGTTGGGTTTCTTTTGCTTTTGCTTCTGTTTCCATGGAGTGCTGCCATTCTTCTTCTTATGCTTTATTTCTTCTTTCTT
ACCAACTGA
Protein sequenceShow/hide protein sequence
MAAYTRSTTFSDQWLLATIALIISGFLAYAIYDAAIASASEVLQRLVIVSPLLLVVVVHWLSLGGGGGNSYYSHNQTAVGFPWGVGFLLLLLLFPWSAAILLLMLYFFFL
TN