; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G008310 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G008310
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRibosome biogenesis regulatory protein
Genome locationCmo_Chr11:4223857..4228505
RNA-Seq ExpressionCmoCh11G008310
SyntenyCmoCh11G008310
Gene Ontology termsGO:0000055 - ribosomal large subunit export from nucleus (biological process)
GO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
InterPro domainsIPR007023 - Ribosomal biogenesis regulatory protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149022.1 ribosome biogenesis regulatory protein homolog [Cucumis sativus]2.1e-15890.94Show/hide
Query:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG
        ME+ENQ PFQIDLG+LMAFNPHHQ+PSL SSREDLVSECLQKG EL Q IANDLFNLPSTEDRDGPLVRLPPP+TRLPREKPLPKPKPPTKWELFA+K+G
Subjt:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG

Query:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP
        IKNRKKDK VYD+QT +WKRRHGYDRANDE+NIPIIEAKMTDE G DPFAARRA+KK RVEKQE+N+LQNLKQAAKVGALPSH+QLAATALPITGTQAAP
Subjt:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP

Query:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK
        KKITKDELGNVAGMAATSTASGGKFDKK AGEKPAKHQGKYRKFLPVVEGTGIGS+EREQTEKVL+RLISKNSHEILN+NKAVNMYNVKKEKKQRNQ GK
Subjt:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK

Query:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK
        SSSMSS KLKPNKKLQKKPLKKGSSK GKAK
Subjt:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK

XP_022933585.1 ribosome biogenesis regulatory protein homolog [Cucurbita moschata]6.0e-177100Show/hide
Query:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG
        MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG
Subjt:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG

Query:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP
        IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP
Subjt:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP

Query:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK
        KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK
Subjt:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK

Query:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK
        SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK
Subjt:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK

XP_022967754.1 ribosome biogenesis regulatory protein homolog [Cucurbita maxima]5.1e-17699.4Show/hide
Query:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG
        MEMENQQPFQIDLGNLMAFNPHH++PSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG
Subjt:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG

Query:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP
        IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP
Subjt:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP

Query:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK
        KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK
Subjt:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK

Query:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK
        SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK
Subjt:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK

XP_023531368.1 ribosome biogenesis regulatory protein homolog [Cucurbita pepo subsp. pepo]1.8e-17398.19Show/hide
Query:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG
        ME ENQQPFQIDLGNLMAFNPHHQ+PSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG
Subjt:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG

Query:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP
        IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKK+RVEKQERNQLQNLK+AAKVGALPSHVQLAATALPITGTQAAP
Subjt:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP

Query:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK
        KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMY VKKEKKQRNQRGK
Subjt:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK

Query:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK
        SSSMSSNKLKPNKKLQKKPLKKGS KNGKAK
Subjt:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK

XP_038878495.1 ribosome biogenesis regulatory protein homolog [Benincasa hispida]4.6e-16190.63Show/hide
Query:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG
        ME+ENQ PFQ+DLGNLMAFNPHH +PSL SSRE+LV+ECLQKG EL QFIANDLFNLPSTEDRDGPLV+LPPP+TRLPREKPLPKPKPPTKWELFA+K+G
Subjt:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG

Query:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP
        IK RKKDK VYD+Q G+WKRRHGYDRANDEENIPIIEAKMTDEPG DPFAARRA+KK RVEKQE+N+LQNLKQAAKVGALPSH+QLAATALPITGTQAAP
Subjt:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP

Query:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK
        KKITKDELGNVAGMAATSTASGGKFDKKL GEKPAKHQGKYRKFLPVVEGTGIGSQE+EQTEKVLNRLISKNSHEILN++KAVNMYNVKKEKKQRNQRGK
Subjt:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK

Query:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK
        SSSMSS KLKPNKKLQKKPLKKGSSK+GKAK
Subjt:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK

TrEMBL top hitse value%identityAlignment
A0A0A0LZY0 Ribosome biogenesis regulatory protein1.0e-15890.94Show/hide
Query:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG
        ME+ENQ PFQIDLG+LMAFNPHHQ+PSL SSREDLVSECLQKG EL Q IANDLFNLPSTEDRDGPLVRLPPP+TRLPREKPLPKPKPPTKWELFA+K+G
Subjt:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG

Query:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP
        IKNRKKDK VYD+QT +WKRRHGYDRANDE+NIPIIEAKMTDE G DPFAARRA+KK RVEKQE+N+LQNLKQAAKVGALPSH+QLAATALPITGTQAAP
Subjt:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP

Query:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK
        KKITKDELGNVAGMAATSTASGGKFDKK AGEKPAKHQGKYRKFLPVVEGTGIGS+EREQTEKVL+RLISKNSHEILN+NKAVNMYNVKKEKKQRNQ GK
Subjt:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK

Query:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK
        SSSMSS KLKPNKKLQKKPLKKGSSK GKAK
Subjt:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK

A0A5A7TFQ4 Ribosome biogenesis regulatory protein3.7e-15688.82Show/hide
Query:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG
        ME+ENQ PFQIDLG+LMAFNPHHQ+PS+  SRE+L+SECLQKG EL Q IANDLFNLPSTEDRDGPLVRLPPP+TRLPREKPLPKPKPPTKWELFA K+G
Subjt:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG

Query:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP
        IK RKKDK VYD+QT +WKRRHGYDRANDE+NIPIIEAKMTDE G DPFAARRA+KK RVEKQE+N+LQNLKQAAKVGALPSH+QLAATALPITGTQAAP
Subjt:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP

Query:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK
        KKITKDELGNVAGMAATSTASGGKFDKK AGEKPAKHQGKYRKFLPVVEGTGIGS+EREQTEKVL+RLISKNSHEILN+NKAVNMYNVKKEKKQRNQ+GK
Subjt:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK

Query:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK
        SSS SS+KLK NKKLQKKPLKKGSSK GKAK
Subjt:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK

A0A6J1DJD9 Ribosome biogenesis regulatory protein2.4e-15588.96Show/hide
Query:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG
        ME ENQ PFQIDLGNL AFNPHHQ+PS  SSREDLV+ECLQKG EL QFIAN+LFN PSTEDRDGPLV+LPPP+T+LPREK LPKPKPPTKWELFAKKRG
Subjt:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG

Query:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP
        IKNRK+DKI YD+QTG+W+RRHGYDRANDE+NIPIIEAKMTDEPG DPFA RRANKKNRVEKQE+N+L+NLKQAAKVGALPSHVQLAAT LPITGTQAAP
Subjt:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP

Query:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK
        KKITKD+LGN AGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQE+EQTEKVLNRLIS+NSHEILNINKAVNMYNVK+EKKQ+ QRGK
Subjt:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK

Query:  SSSMSSNKLKPNKKLQKKPLKKGSSK
        SSSMSS KLKPNKKLQKK LKKGSSK
Subjt:  SSSMSSNKLKPNKKLQKKPLKKGSSK

A0A6J1F066 Ribosome biogenesis regulatory protein2.9e-177100Show/hide
Query:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG
        MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG
Subjt:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG

Query:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP
        IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP
Subjt:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP

Query:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK
        KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK
Subjt:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK

Query:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK
        SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK
Subjt:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK

A0A6J1HW20 Ribosome biogenesis regulatory protein2.5e-17699.4Show/hide
Query:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG
        MEMENQQPFQIDLGNLMAFNPHH++PSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG
Subjt:  MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG

Query:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP
        IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP
Subjt:  IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAP

Query:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK
        KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK
Subjt:  KKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK

Query:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK
        SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK
Subjt:  SSSMSSNKLKPNKKLQKKPLKKGSSKNGKAK

SwissProt top hitse value%identityAlignment
A1A5P2 Ribosome biogenesis regulatory protein homolog2.7e-3134.57Show/hide
Query:  QIDLGNLMAF--NPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKD
        + DLGNL+A   NP         S E   +E      +  Q + N L+ LP+    +  + RLP P+TRLPREKPLP+P+P T+W+ FA+ +GI+ +KK 
Subjt:  QIDLGNLMAF--NPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKD

Query:  KIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPKKITKDE
         +V+D+ +G W+RR GY RA D+    +IE   + +P  D FA R   KK RV K E N+L+NL +A K+  +PS     +  L  TG Q      +K+E
Subjt:  KIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPKKITKDE

Query:  LGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKSSSMSSN
        LG    +A  STAS G+F ++L  EK  +  GK RKF P+    G  + E++   ++L  + SK     L++ +A N    ++++++  +R K S     
Subjt:  LGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKSSSMSSN

Query:  K---LKPNKKLQKKPLKKGSSKNG
        K     P+ + +  P  +G  + G
Subjt:  K---LKPNKKLQKKPLKKGSSKNG

Q15050 Ribosome biogenesis regulatory protein homolog9.4e-3235.09Show/hide
Query:  QIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKI
        Q DLGNL+A +  +    L  +     +E      +  Q + N L+ LP+    +  + RLP P+TRLPREKPLP+P+P T+W+ FA+ +GI+ +KK  +
Subjt:  QIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKI

Query:  VYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPKKITKDELG
        V+D+ +G W+RR GY RA D+    +IE     +P  D FA R   KK RV K E N+L+NL +A K+  LPS     A  L  TG Q      +K+ELG
Subjt:  VYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPKKITKDELG

Query:  NVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKSSSMSSNK-
            +A  STAS G+F ++L  EK  +  GK RKF P+    G  + E++   ++L  + SK     L++ +A N    ++++++  +R K S     K 
Subjt:  NVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKSSSMSSNK-

Query:  --LKPNKKLQKKPLKKGSSKNG
            P  K +  P  +G  + G
Subjt:  --LKPNKKLQKKPLKKGSSKNG

Q2KIH4 Ribosome biogenesis regulatory protein homolog5.0e-3335.79Show/hide
Query:  QIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKI
        + DLGNL+A +  +    L  +     +E      +  Q + N L+ LP+    +  + RLP PSTRLPREKP+P+P+P T+W+ FA+ +GI+ +KK  +
Subjt:  QIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKI

Query:  VYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPKKITKDELG
        V+D+ +G W+RR GY RA D+    +IE     +P  D FA R   KK RV K E N+L+NL +A K+  LPS     A  +  TG Q      +K+ELG
Subjt:  VYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPKKITKDELG

Query:  NVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKSSSMSSNK
            +A  STAS G+F ++L  EK  +  GK RKF P+    G  + ER+   ++L  + SK     ++I +A N    ++++++  +R K S     K
Subjt:  NVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKSSSMSSNK

Q9CYH6 Ribosome biogenesis regulatory protein homolog1.2e-3134.88Show/hide
Query:  QIDLGNLMAF--NPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKD
        + DLGNL+A   NP         S E   +E      +  Q + N L+ LP+    +  + RLP P+TRLPREKPLP+P+P T+W+ FA+ +GI+ +KK 
Subjt:  QIDLGNLMAF--NPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKD

Query:  KIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPKKITKDE
         +V+D+ +G W+RR GY RA D+    +IE   + +P  D FA R   KK RV K E N+L+NL +A K+  +PS     +  L  TG Q      +K+E
Subjt:  KIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPKKITKDE

Query:  LGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKSSSMSSN
        LG    +A  STAS G+F ++L  EK  +  GK RKF P+    G  + E++   ++L  + SK     L++ +A N    ++++++  +R K S     
Subjt:  LGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKSSSMSSN

Query:  K---LKPNKKLQKKPLKKGSSKNG
        K     P+ K +  P  +G  + G
Subjt:  K---LKPNKKLQKKPLKKGSSKNG

Q9SH88 Ribosome biogenesis regulatory protein homolog3.5e-11165.42Show/hide
Query:  EMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGI
        EME +Q +Q+D+GNL+AFNP+H++PS  SSR +LV E L +G +L Q IAN LFN PSTE  DGP+V+LPPP+T+LPREK +P+PKPPTKWE FA K+GI
Subjt:  EMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGI

Query:  KNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPK
        + RKK+K+V+D+QT  +KRRHGYDR ND+ ++PIIEAK +DEPGVDPFA R  +KK RV KQE+N+LQNLK A K GALPSHVQLAAT+LPI+GT+A PK
Subjt:  KNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPK

Query:  KITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKS
        KI KDELG+VAG+AATSTASGGKFDKKL GEKP K QGK+ K+LPVV G G  + E+EQT  VL+++ SK+SHEILN+ KA+NMYNVKKEKK+       
Subjt:  KITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKS

Query:  SSMSSNKLKPNKKLQKKPLKK
         S  S+KLKP K + KKP  K
Subjt:  SSMSSNKLKPNKKLQKKPLKK

Arabidopsis top hitse value%identityAlignment
AT2G37990.1 ribosome biogenesis regulatory protein (RRS1) family protein2.5e-11265.42Show/hide
Query:  EMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGI
        EME +Q +Q+D+GNL+AFNP+H++PS  SSR +LV E L +G +L Q IAN LFN PSTE  DGP+V+LPPP+T+LPREK +P+PKPPTKWE FA K+GI
Subjt:  EMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGI

Query:  KNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPK
        + RKK+K+V+D+QT  +KRRHGYDR ND+ ++PIIEAK +DEPGVDPFA R  +KK RV KQE+N+LQNLK A K GALPSHVQLAAT+LPI+GT+A PK
Subjt:  KNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPK

Query:  KITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKS
        KI KDELG+VAG+AATSTASGGKFDKKL GEKP K QGK+ K+LPVV G G  + E+EQT  VL+++ SK+SHEILN+ KA+NMYNVKKEKK+       
Subjt:  KITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKS

Query:  SSMSSNKLKPNKKLQKKPLKK
         S  S+KLKP K + KKP  K
Subjt:  SSMSSNKLKPNKKLQKKPLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGGAGAATCAACAACCGTTTCAGATCGACCTGGGGAATCTAATGGCGTTCAATCCTCACCATCAATATCCTTCTCTCTCATCCTCGAGGGAGGATCTAGTTAG
TGAATGTCTGCAAAAGGGCGCAGAGTTAGCTCAATTTATTGCTAATGATCTTTTCAACCTGCCTTCAACTGAAGACAGAGATGGTCCGCTCGTGAGGTTGCCTCCACCTT
CTACACGATTGCCGAGAGAGAAACCTTTGCCAAAGCCCAAGCCTCCTACAAAATGGGAGCTTTTTGCCAAAAAAAGAGGCATAAAGAATCGTAAAAAAGATAAGATAGTG
TATGATGATCAGACGGGTTCATGGAAACGTCGCCATGGTTATGATCGTGCAAATGATGAGGAGAACATACCCATAATTGAGGCCAAGATGACTGATGAGCCCGGGGTGGA
TCCATTTGCTGCAAGGCGAGCCAATAAGAAAAACCGAGTTGAAAAACAAGAAAGGAATCAGTTACAGAATCTGAAGCAGGCTGCAAAAGTTGGCGCTCTACCAAGTCACG
TTCAACTAGCTGCCACTGCTTTGCCTATAACTGGAACTCAAGCTGCACCAAAGAAAATTACCAAGGATGAACTTGGAAACGTAGCTGGAATGGCAGCAACTTCAACAGCC
AGTGGTGGAAAATTTGACAAGAAGTTAGCAGGAGAAAAACCTGCGAAACATCAAGGAAAATATCGCAAGTTTCTGCCTGTTGTGGAGGGAACAGGGATAGGCTCTCAAGA
AAGAGAGCAAACTGAGAAAGTTCTTAACAGATTAATTTCCAAGAATTCACACGAGATTCTCAATATTAATAAGGCTGTCAACATGTACAATGTGAAAAAAGAAAAGAAAC
AAAGAAACCAACGAGGGAAGTCTTCATCAATGTCAAGCAACAAGTTGAAACCAAATAAGAAACTCCAGAAGAAGCCATTGAAGAAGGGATCTTCAAAGAATGGCAAGGCA
AAATGA
mRNA sequenceShow/hide mRNA sequence
ATTTAAGTTACGAAATTATATAAAGTATAAATAATAATAATTATTATTAAATAGAGAAGAAAACGGTAGCTAGGGTTTTAGAGATTAGTCCTCAGTCGTCGGCGGTATAC
AACAGCCTTACATTGCAGAATCATCGAACTCATAATCGGAAAAGGTTGTAAGGTGGCCGGAACATGGAGATGGAGAATCAACAACCGTTTCAGATCGACCTGGGGAATCT
AATGGCGTTCAATCCTCACCATCAATATCCTTCTCTCTCATCCTCGAGGGAGGATCTAGTTAGTGAATGTCTGCAAAAGGGCGCAGAGTTAGCTCAATTTATTGCTAATG
ATCTTTTCAACCTGCCTTCAACTGAAGACAGAGATGGTCCGCTCGTGAGGTTGCCTCCACCTTCTACACGATTGCCGAGAGAGAAACCTTTGCCAAAGCCCAAGCCTCCT
ACAAAATGGGAGCTTTTTGCCAAAAAAAGAGGCATAAAGAATCGTAAAAAAGATAAGATAGTGTATGATGATCAGACGGGTTCATGGAAACGTCGCCATGGTTATGATCG
TGCAAATGATGAGGAGAACATACCCATAATTGAGGCCAAGATGACTGATGAGCCCGGGGTGGATCCATTTGCTGCAAGGCGAGCCAATAAGAAAAACCGAGTTGAAAAAC
AAGAAAGGAATCAGTTACAGAATCTGAAGCAGGCTGCAAAAGTTGGCGCTCTACCAAGTCACGTTCAACTAGCTGCCACTGCTTTGCCTATAACTGGAACTCAAGCTGCA
CCAAAGAAAATTACCAAGGATGAACTTGGAAACGTAGCTGGAATGGCAGCAACTTCAACAGCCAGTGGTGGAAAATTTGACAAGAAGTTAGCAGGAGAAAAACCTGCGAA
ACATCAAGGAAAATATCGCAAGTTTCTGCCTGTTGTGGAGGGAACAGGGATAGGCTCTCAAGAAAGAGAGCAAACTGAGAAAGTTCTTAACAGATTAATTTCCAAGAATT
CACACGAGATTCTCAATATTAATAAGGCTGTCAACATGTACAATGTGAAAAAAGAAAAGAAACAAAGAAACCAACGAGGGAAGTCTTCATCAATGTCAAGCAACAAGTTG
AAACCAAATAAGAAACTCCAGAAGAAGCCATTGAAGAAGGGATCTTCAAAGAATGGCAAGGCAAAATGAACAAATTTTCGCAATAGATCATGAGCTCTTGTAGAGATGAA
AAATGCTCGTCTTACAAGTGATCAGACATCGTTTTACCAAAACTAGCAAAGAAAAGCAAAACAAAACAAAACAAAACAACATTTGGTTCAAGAAGAAGAGACACTCAACA
CTGCTACAAGGCCGCTGAAGGTGGTGGGCGTTCACATACCTGGTTTCCGCAATTCACTTTCGCCATGTGCAAAATGGCATCTTTCTCTAAACGTACAAGTACCCTTTGCA
AAATTAGCACAAAGCTTGGTCTTGAAGTTGTTTGCTGAGTGCTGAGAATGCTGCTGCTGCTGCTGCCTCATGGCATTATTGGCAGAGGCTGCGCCGACGTTTGCAATCAA
CTCGCGCACCATTGAACTAGCAAGATTGATCTGATCAAATGTACCCTCGAGCTCAATGTTCTTCAAGCTAGAGTCAGACTCGTGATCTTTTATAGAAAGTCTTGCTCCTG
TCATTCGACAGATATTCTTCGAGTTGACACCATTCTTCCCAATTATGGGACCAGCAAGCGATGCATCGACGCTAATCTTTGCTGTTGCAGACGCACCGAAGCTAGCAGCA
GGTCCATGGTTGGGTTGTGGCGGAGGCACATTCCAGCCACCACCCATTCTGGGTTGTTGTCCTAGTGGTCCTCCACCCATTCCACCGTGTTCTGGTGGAGGATTTGGCCT
TCCAAGGTCCCACTCGCCATGAGCAAAATGGCATTTGTCACCGAATCTGCAGCCTTCGGCTGAGTTGAATTTGTTGCACAAACGTGTCTTGACTGCCGGAGGAGAAACAC
CATCTGGAAACGATGGAGGGGCGACAGGATTTCTAATGCCAGGGGAAATAGCAGGACTGTTCATCTGAGAAATTGCTTTGAATCCACCAGGAACATAATGTGCAAAATGA
CACCCCTCACCAAAAGGACAACCAGAAGTGCTGCATTTTTATTTCAAAAAGACGAGTAAACTTCACCATAGCAACCCGATCTAGAATACTAGTCGAAACTCATACAAAAT
CTAACGAAACCAACAAAAAACCGATGAAGATTCTTGAGCATAAACAACCAAAGTAAAGATCACAATAACTCTACTCCAAAACAGACAAAGATATCAAATTTCAAGACAAC
TCTTCAACTTAGCAACAGAAACAAGTTGAACTACCGTATCAGAAAATTGTAATGTCCAAAATCCTTAACAGGAAAAGAAACCGAAATCTTAAA
Protein sequenceShow/hide protein sequence
MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIV
YDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTA
SGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGKSSSMSSNKLKPNKKLQKKPLKKGSSKNGKA
K