CuGenDBv2

Gene ID	CmoCh11G008400
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Rho GTPase-activating gacO-like protein
Genome location	Cmo_Chr11:4275082..4275510
RNA-Seq Expression	CmoCh11G008400
Synteny	CmoCh11G008400
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7022072.1 hypothetical protein SDJN02_15801, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-65

99.3

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEK+EDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK

Query:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
Subjt:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

XP_022927916.1 uncharacterized protein LOC111434674 [Cucurbita moschata]

7.0e-66

100

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK

Query:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
Subjt:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

XP_022968481.1 uncharacterized protein LOC111467706 [Cucurbita maxima]

1.7e-64

97.89

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEK+EDDDIEN+KGNEIVSKEMKSSSSPAAA ENGKRRRRSSQVKEKLDPVK
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK

Query:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
Subjt:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

XP_023516906.1 uncharacterized protein LOC111780671 [Cucurbita pepo subsp. pepo]

4.6e-57

92.25

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEK+EDDD ENVKG +IVSKEMK   SP AA ENGKRRRRSSQVKEKLDPVK
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK

Query:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DENGDGTRSSTDESTRSNGFRHNGSRRKSKP RAAEAGVNC+
Subjt:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

XP_023530954.1 uncharacterized protein LOC111793344 [Cucurbita pepo subsp. pepo]

2.0e-65

99.3

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEK+EDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK

Query:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
Subjt:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LXE8 Uncharacterized protein

1.1e-56

90.14

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEK+ED+D EN+KG++IVSKEMK   +P AA ENGKRRRR+SQVKEKLDPVK
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK

Query:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGV+CK
Subjt:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

A0A1S3BRW6 uncharacterized protein LOC103492511

1.1e-56

90.14

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEK+ED+D EN+KG++IVSKEMK   +P AA ENGKRRRR+SQVKEKLDPVK
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK

Query:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGV+CK
Subjt:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

A0A5A7TJZ9 Uncharacterized protein

1.1e-56

90.14

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEK+ED+D EN+KG++IVSKEMK   +P AA ENGKRRRR+SQVKEKLDPVK
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK

Query:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGV+CK
Subjt:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

A0A6J1EQ87 uncharacterized protein LOC111434674

3.4e-66

100

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK

Query:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
Subjt:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

A0A6J1HUZ2 uncharacterized protein LOC111467706

8.4e-65

97.89

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
        MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEK+EDDDIEN+KGNEIVSKEMKSSSSPAAA ENGKRRRRSSQVKEKLDPVK
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK

Query:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
        DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
Subjt:  DENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G42190.1 unknown protein

9.2e-24

51.05

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
        M RGRGKG+K   +  +D GSG+EEKIPA +RRGRPQKP+KD+ +EEE    E+DD E V+  E V  E +     +  +++ K R+R        D  +
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK

Query:  DENGDGTRSSTDESTRSN--GFRHNGSRRKSKPRRAAEAGVNC
        +ENG G++ +TD+STRS   GFR NGSRRKSKPRRAAEA V C
Subjt:  DENGDGTRSSTDESTRSN--GFRHNGSRRKSKPRRAAEAGVNC

AT3G57930.1 unknown protein

4.6e-23

50.69

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
        M RGRGKG++   T  +D GSGEEEKIPA ++RGRPQKP+KDE +EEE E ++  D E  K ++       S +S    TENG++R++  + KE  +  +
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK

Query:  DENGDGTRSSTDESTRSN---GFRHNGSRRKSKPRRAAEAGVNC
        +ENG G++SST++S +S+   GFR NGSRRK+KPRRAAEA V C
Subjt:  DENGDGTRSSTDESTRSN---GFRHNGSRRKSKPRRAAEAGVNC

AT3G57930.2 unknown protein

4.6e-23

50.69

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Query:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK
        M RGRGKG++   T  +D GSGEEEKIPA ++RGRPQKP+KDE +EEE E ++  D E  K ++       S +S    TENG++R++  + KE  +  +
Subjt:  MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVK

Query:  DENGDGTRSSTDESTRSN---GFRHNGSRRKSKPRRAAEAGVNC
        +ENG G++SST++S +S+   GFR NGSRRK+KPRRAAEA V C
Subjt:  DENGDGTRSSTDESTRSN---GFRHNGSRRKSKPRRAAEAGVNC

Sequences

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CDS sequence

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ATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACCGTTACAAATCACGACGATGCTGGAAGTGGTGAGGAAGAGAAGATTCCTGCGCAAAAGCGAAGGGGAAGGCCACA
AAAGCCATTGAAGGACGAGATCGACGAGGAAGAAGCTGAAAAGATGGAAGACGACGACATTGAGAACGTGAAAGGCAATGAAATTGTGAGCAAGGAGATGAAAAGCAGCA
GCAGCCCAGCTGCAGCAACAGAGAATGGGAAAAGGAGGAGAAGAAGCTCACAAGTGAAAGAAAAGCTCGATCCAGTCAAAGATGAAAATGGAGACGGAACACGATCAAGC
ACTGATGAATCAACCAGATCGAATGGATTTCGCCACAACGGAAGCAGGAGAAAAAGCAAGCCCCGTCGAGCTGCCGAAGCAGGCGTTAACTGCAAGTAA

mRNA sequence

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Protein sequence

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MGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKMEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVKDENGDGTRSS
TDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK

CmoCh11G008400 (gene) of Cucurbita moschata (Rifu) v1 genome