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CmoCh11G008410 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G008410
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionbeta-glucosidase 12-like
Genome locationCmo_Chr11:4278902..4279346
RNA-Seq ExpressionCmoCh11G008410
SyntenyCmoCh11G008410
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0009651 - response to salt stress (biological process)
GO:0019762 - glucosinolate catabolic process (biological process)
GO:0008422 - beta-glucosidase activity (molecular function)
InterPro domainsIPR001360 - Glycoside hydrolase family 1
IPR017853 - Glycoside hydrolase superfamily
IPR033132 - Glycosyl hydrolases family 1, N-terminal conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588175.1 Cyanogenic beta-glucosidase, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2994.59Show/hide
Query:  MGKLVLLVLRVL-VLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP
        MGKLVLLVL VL VLVLVRASGNPSHGVEFTLNRSCFP GFVFGTASSAYQYEG ANTDGRGPSIWDTFTHKYP
Subjt:  MGKLVLLVLRVL-VLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP

XP_008450458.1 PREDICTED: beta-glucosidase 12-like [Cucumis melo]1.0e-1774.19Show/hide
Query:  LVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP
        L  +LV  SGN ++GVE  LNR+ FP GFVFG+ASSAYQYEGAAN DGR PSIWDTFTHKYP
Subjt:  LVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP

XP_022927774.1 beta-glucosidase 12-like [Cucurbita moschata]2.9e-33100Show/hide
Query:  MGKLVLLVLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP
        MGKLVLLVLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP
Subjt:  MGKLVLLVLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP

XP_022967216.1 beta-glucosidase 13-like [Cucurbita maxima]2.2e-2889.61Show/hide
Query:  MGKLVLLVLRVL----VLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP
        MGKLVLLVL VL    VLVLVRASGNPSHGVEF+LNRSCFP  FVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP
Subjt:  MGKLVLLVLRVL----VLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP

XP_023530952.1 beta-glucosidase 12-like [Cucurbita pepo subsp. pepo]4.0e-3095.95Show/hide
Query:  MGKLVLLVLRVL-VLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP
        MGKLVLLVL VL VLVLVRASGNPSHGVEFTLNRSCFP GFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP
Subjt:  MGKLVLLVLRVL-VLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP

TrEMBL top hitse value%identityAlignment
A0A0A0LX61 Uncharacterized protein7.1e-1765.67Show/hide
Query:  LVLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP
        LV+++  +++   SGN S+GV+  LNR+ FP GFVFG+ASS+YQYEGAAN DGR PSIWDTFTHKYP
Subjt:  LVLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP

A0A1S3BPX7 beta-glucosidase 12-like4.9e-1874.19Show/hide
Query:  LVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP
        L  +LV  SGN ++GVE  LNR+ FP GFVFG+ASSAYQYEGAAN DGR PSIWDTFTHKYP
Subjt:  LVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP

A0A6J1DMP4 beta-glucosidase 12-like1.4e-1770.59Show/hide
Query:  VLLVLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKY
        +LL+L + +LV+    GNPS+GVE +LNRS FP GFVFGTASSAYQYEGAAN DGRGPSIWD F HK+
Subjt:  VLLVLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKY

A0A6J1EIY3 beta-glucosidase 12-like1.4e-33100Show/hide
Query:  MGKLVLLVLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP
        MGKLVLLVLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP
Subjt:  MGKLVLLVLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP

A0A6J1HRE5 beta-glucosidase 13-like1.1e-2889.61Show/hide
Query:  MGKLVLLVLRVL----VLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP
        MGKLVLLVL VL    VLVLVRASGNPSHGVEF+LNRSCFP  FVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP
Subjt:  MGKLVLLVLRVL----VLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYP

SwissProt top hitse value%identityAlignment
B8AVF0 Beta-glucosidase 123.2e-1456.72Show/hide
Query:  VLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE
        +L   +L+ V ASG  +   E  ++R  FP GF+FGTASS+YQYEG A   GRGPSIWDTFTH++PE
Subjt:  VLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE

P26204 Non-cyanogenic beta-glucosidase1.4e-1477.27Show/hide
Query:  LNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE
        L+RS FP GF+FG  SSAYQ+EGA N  GRGPSIWDTFTHKYPE
Subjt:  LNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE

P26205 Cyanogenic beta-glucosidase (Fragment)1.5e-1679.59Show/hide
Query:  LNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPEGMEFR
        LNRSCF  GFVFGTASSA+QYEGAA  DG+GPSIWDTFTHKYPE ++ R
Subjt:  LNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPEGMEFR

Q7XKV2 Beta-glucosidase 131.6e-1355.41Show/hide
Query:  GKLVLLVLRVLVLVLVRA-SGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE
        G++V+L   +L L+LV A SG P       ++R  FP GF+FGTASS+YQYEG A   GRGPSIWDTFTH++P+
Subjt:  GKLVLLVLRVLVLVLVRA-SGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE

Q7XKV4 Beta-glucosidase 124.1e-1456.72Show/hide
Query:  VLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE
        +L   +L+ V ASG  +   E  ++R  FP GF+FGTASS+YQYEG A   GRGPSIWDTFTH++PE
Subjt:  VLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE

Arabidopsis top hitse value%identityAlignment
AT2G25630.1 beta glucosidase 148.0e-1352.11Show/hide
Query:  LVLLVLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE
        LV ++L    +V  R S  P       L ++ FP  F+FG A+SAYQ EGAA  DGRGPSIWDTF+ KYPE
Subjt:  LVLLVLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE

AT2G44450.1 beta glucosidase 152.1e-1357.14Show/hide
Query:  VLLVLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE
        +L+VL VL    V A+ N S      L RS FP  F+FG+A+SAYQ EG A+ DGRGPSIWDTF+ KYPE
Subjt:  VLLVLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE

AT2G44480.1 beta glucosidase 171.0e-1249.3Show/hide
Query:  VLLVLRVLVLVLVRASGNPSH-GVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE
        +++++ ++  +    + +PS   +  +L RS FP  F FG ASSAYQ EGAAN DGR PSIWDTFT +YPE
Subjt:  VLLVLRVLVLVLVRASGNPSH-GVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE

AT5G42260.1 beta glucosidase 125.6e-1453.52Show/hide
Query:  LVLRVLVLVLVRASGN---PSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE
        + L +LV ++V A        H     L RS FP  F+FG A+SAYQ EGAA+ DGRGPSIWDTF+ KYPE
Subjt:  LVLRVLVLVLVRASGN---PSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE

AT5G44640.1 beta glucosidase 131.9e-1456.72Show/hide
Query:  VLVLVLVRASGN---PSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE
        +LV ++V AS       H     L RS FP  F+FG A+SAYQ EGAA+ DGRGPSIWDTF+ KYPE
Subjt:  VLVLVLVRASGN---PSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAACTCGTTCTTCTCGTTCTTCGTGTTCTTGTTCTTGTTCTTGTTCGTGCTAGTGGAAACCCTAGCCATGGCGTTGAGTTCACCTTGAATAGAAGTTGTTTCCC
ACACGGGTTCGTATTTGGGACAGCTTCGTCCGCTTACCAATATGAAGGTGCTGCTAATACAGATGGTCGAGGGCCGAGTATTTGGGATACGTTCACACATAAATACCCAG
AGGGTATGGAGTTTCGTAGACTCGTCTTTTCATATTTTGATAACGTCTCCTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAAACTCGTTCTTCTCGTTCTTCGTGTTCTTGTTCTTGTTCTTGTTCGTGCTAGTGGAAACCCTAGCCATGGCGTTGAGTTCACCTTGAATAGAAGTTGTTTCCC
ACACGGGTTCGTATTTGGGACAGCTTCGTCCGCTTACCAATATGAAGGTGCTGCTAATACAGATGGTCGAGGGCCGAGTATTTGGGATACGTTCACACATAAATACCCAG
AGGGTATGGAGTTTCGTAGACTCGTCTTTTCATATTTTGATAACGTCTCCTTGTAA
Protein sequenceShow/hide protein sequence
MGKLVLLVLRVLVLVLVRASGNPSHGVEFTLNRSCFPHGFVFGTASSAYQYEGAANTDGRGPSIWDTFTHKYPEGMEFRRLVFSYFDNVSL