; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G008550 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G008550
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionArmadillo repeat-containing protein 8
Genome locationCmo_Chr11:4360112..4361539
RNA-Seq ExpressionCmoCh11G008550
SyntenyCmoCh11G008550
Gene Ontology termsGO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0034657 - GID complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000225 - Armadillo
IPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR038739 - Armadillo-type fold containing protein ARMC8/Vid28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588187.1 Armadillo repeat-containing protein 8, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4898.21Show/hide
Query:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR
        MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGV+VGVSAV+DAGAFPR
Subjt:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR

Query:  LLRLLSDPDPKV
        LLRLLSDPDPKV
Subjt:  LLRLLSDPDPKV

KAG7022085.1 Armadillo repeat-containing protein 8 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-4898.21Show/hide
Query:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR
        MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGV+VGVSAV+DAGAFPR
Subjt:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR

Query:  LLRLLSDPDPKV
        LLRLLSDPDPKV
Subjt:  LLRLLSDPDPKV

XP_022926791.1 uncharacterized protein C26H5.04-like isoform X1 [Cucurbita moschata]3.8e-49100Show/hide
Query:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR
        MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR
Subjt:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR

Query:  LLRLLSDPDPKV
        LLRLLSDPDPKV
Subjt:  LLRLLSDPDPKV

XP_022966972.1 uncharacterized protein C26H5.04-like isoform X1 [Cucurbita maxima]2.4e-4898.21Show/hide
Query:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR
        MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGV+VGVSAV+DAGAFPR
Subjt:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR

Query:  LLRLLSDPDPKV
        LLRLLSDPDPKV
Subjt:  LLRLLSDPDPKV

XP_023530333.1 uncharacterized protein C26H5.04-like isoform X1 [Cucurbita pepo subsp. pepo]2.4e-4898.21Show/hide
Query:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR
        MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGV+VGVSAV+DAGAFPR
Subjt:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR

Query:  LLRLLSDPDPKV
        LLRLLSDPDPKV
Subjt:  LLRLLSDPDPKV

TrEMBL top hitse value%identityAlignment
A0A5D3D5L9 Armadillo repeat-containing protein 87.9e-4589.29Show/hide
Query:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR
        MPTSASSA PKPSS+L+ARLT ADAAV LKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA+LSSTSDPNILVQSAAVLGSF+CGV+ GVSAV+DAGAFP+
Subjt:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR

Query:  LLRLLSDPDPKV
        LLRLL+DPDPKV
Subjt:  LLRLLSDPDPKV

A0A6J1EFV6 Armadillo repeat-containing protein 81.8e-49100Show/hide
Query:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR
        MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR
Subjt:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR

Query:  LLRLLSDPDPKV
        LLRLLSDPDPKV
Subjt:  LLRLLSDPDPKV

A0A6J1H8W8 Armadillo repeat-containing protein 82.5e-4692.86Show/hide
Query:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR
        MPTSASSA PKPSSELV+RLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAA+LSSTSDPNILVQSAAVLGSF+CGV+ GVSAV+DAGAFPR
Subjt:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR

Query:  LLRLLSDPDPKV
        LLRLL+DPDPKV
Subjt:  LLRLLSDPDPKV

A0A6J1HQT3 Armadillo repeat-containing protein 81.2e-4898.21Show/hide
Query:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR
        MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGV+VGVSAV+DAGAFPR
Subjt:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR

Query:  LLRLLSDPDPKV
        LLRLLSDPDPKV
Subjt:  LLRLLSDPDPKV

A0A6J1JC02 Armadillo repeat-containing protein 83.2e-4691.96Show/hide
Query:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR
        MPTSASSA PKPSSELV+RLTAADAAVKLKALRDIKNQIIGNRTKKLSF+KLGVVPHVAA+LSSTSDPNILVQSAAVLGSF+CGV+ GVSAV+DAGAFPR
Subjt:  MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPR

Query:  LLRLLSDPDPKV
        LLRLL+DPDPKV
Subjt:  LLRLLSDPDPKV

SwissProt top hitse value%identityAlignment
Q2KI54 Armadillo repeat-containing protein 87.0e-0634.86Show/hide
Query:  SASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVL-SSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLL
        S  S     S   V RL   D    L+ + D+KN +IGN  +K + I LG VP +  +L   TS   +  + A VLGS + G    V +++D    P LL
Subjt:  SASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVL-SSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLL

Query:  RLLSDPDPK
        + L  PD K
Subjt:  RLLSDPDPK

Q5R6S3 Armadillo repeat-containing protein 87.0e-0634.86Show/hide
Query:  SASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVL-SSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLL
        S  S     S   V RL   D    L+ + D+KN +IGN  +K + I LG VP +  +L   TS   +  + A VLGS + G    V +++D    P LL
Subjt:  SASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVL-SSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLL

Query:  RLLSDPDPK
        + L  PD K
Subjt:  RLLSDPDPK

Q68FK4 Armadillo repeat-containing protein 82.7e-0534.19Show/hide
Query:  SASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVL-SSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLL
        S  S     S   V RL   D    L+ + D+KN +IGN  +K + I LG VP +  +L   TS   +  + A VLGS S G    V +++D    P LL
Subjt:  SASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVL-SSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLL

Query:  RLLSDPDPKVQMLAAVL
        + L   D  +Q + A L
Subjt:  RLLSDPDPKVQMLAAVL

Q8IUR7 Armadillo repeat-containing protein 87.0e-0634.86Show/hide
Query:  SASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVL-SSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLL
        S  S     S   V RL   D    L+ + D+KN +IGN  +K + I LG VP +  +L   TS   +  + A VLGS + G    V +++D    P LL
Subjt:  SASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVL-SSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLL

Query:  RLLSDPDPK
        + L  PD K
Subjt:  RLLSDPDPK

Q9DBR3 Armadillo repeat-containing protein 87.0e-0634.86Show/hide
Query:  SASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVL-SSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLL
        S  S     S   V RL   D    L+ + D+KN +IGN  +K + I LG VP +  +L   TS   +  + A VLGS + G    V +++D    P LL
Subjt:  SASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVL-SSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLL

Query:  RLLSDPDPK
        + L  PD K
Subjt:  RLLSDPDPK

Arabidopsis top hitse value%identityAlignment
AT1G51350.1 ARM repeat superfamily protein8.7e-2855.65Show/hide
Query:  MPTSASSATPKPS--------SELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDP----NILVQSAAVLGSFSCGVNVG
        MPT+ +S+    S        S++ +RL ++D  VKLKALR++KNQIIGNRTKKLSF+KLG +P +A+VL+   D     NILVQSAA LGSF+CG   G
Subjt:  MPTSASSATPKPS--------SELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDP----NILVQSAAVLGSFSCGVNVG

Query:  VSAVIDAGAFPRLLRLLSDPDPKV
        V AV+DAG FP LLRLL++ D KV
Subjt:  VSAVIDAGAFPRLLRLLSDPDPKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCTCAGCTTCTTCTGCGACTCCCAAGCCTTCCTCCGAGCTCGTCGCTCGGTTGACGGCCGCCGACGCCGCCGTCAAGCTGAAGGCCTTGAGAGACATCAAGAA
TCAGATCATTGGAAACCGCACCAAGAAGCTGTCCTTCATCAAGCTCGGCGTTGTCCCCCATGTTGCTGCCGTTCTCTCCTCCACTTCTGACCCCAACATTCTCGTCCAGT
CCGCTGCTGTTCTTGGCAGCTTTTCCTGCGGCGTCAACGTTGGTGTTTCCGCCGTTATCGATGCTGGAGCCTTCCCTCGATTGCTTCGGTTGCTTTCCGATCCCGATCCC
AAGGTACAGATGCTCGCTGCCGTGCTAAACACATGCTCCAGCTGTAGGGATAACAGAATTTTGCTGTGTAGCAGCACATCCCGCATGACATATAACTTCATCAGCTCCGC
CTTAAGTCAAGCTGATTCATAA
mRNA sequenceShow/hide mRNA sequence
GGAGGTTTGCGTTGCTCTCAAAGCTCCGAGGGGTTCTCTCTGCTGTGGCCTCGGCGCCATTTCCCATCCCAGTAGCTCTCTCTGGACTGGGACGATGCCAACCTCAGCTT
CTTCTGCGACTCCCAAGCCTTCCTCCGAGCTCGTCGCTCGGTTGACGGCCGCCGACGCCGCCGTCAAGCTGAAGGCCTTGAGAGACATCAAGAATCAGATCATTGGAAAC
CGCACCAAGAAGCTGTCCTTCATCAAGCTCGGCGTTGTCCCCCATGTTGCTGCCGTTCTCTCCTCCACTTCTGACCCCAACATTCTCGTCCAGTCCGCTGCTGTTCTTGG
CAGCTTTTCCTGCGGCGTCAACGTTGGTGTTTCCGCCGTTATCGATGCTGGAGCCTTCCCTCGATTGCTTCGGTTGCTTTCCGATCCCGATCCCAAGGTACAGATGCTCG
CTGCCGTGCTAAACACATGCTCCAGCTGTAGGGATAACAGAATTTTGCTGTGTAGCAGCACATCCCGCATGACATATAACTTCATCAGCTCCGCCTTAAGTCAAGCTGAT
TCATAA
Protein sequenceShow/hide protein sequence
MPTSASSATPKPSSELVARLTAADAAVKLKALRDIKNQIIGNRTKKLSFIKLGVVPHVAAVLSSTSDPNILVQSAAVLGSFSCGVNVGVSAVIDAGAFPRLLRLLSDPDP
KVQMLAAVLNTCSSCRDNRILLCSSTSRMTYNFISSALSQADS