; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G008590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G008590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationCmo_Chr11:4378215..4382536
RNA-Seq ExpressionCmoCh11G008590
SyntenyCmoCh11G008590
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0010262 - somatic embryogenesis (biological process)
GO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0055046 - microgametogenesis (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022088.1 Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyrosperma]9.4e-14498.18Show/hide
Query:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
        MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
Subjt:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK

Query:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
        MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
Subjt:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK

Query:  KSIKARK---PYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD
        KSIKARK   PYLHESRHQHAIRRTRGSGGRFTKKNEA DGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMAS+
Subjt:  KSIKARK---PYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD

XP_022926860.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita moschata]8.2e-148100Show/hide
Query:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
        MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
Subjt:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK

Query:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
        MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
Subjt:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK

Query:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD
        KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD
Subjt:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD

XP_022926867.1 nuclear transcription factor Y subunit A-1-like isoform X2 [Cucurbita moschata]7.9e-14398.15Show/hide
Query:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
        MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
Subjt:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK

Query:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
        MQHVSSTFPVMHGECLMQSTQLEL     ACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
Subjt:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK

Query:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD
        KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD
Subjt:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD

XP_022968054.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucurbita maxima]7.2e-14498.15Show/hide
Query:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
        MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLP+VGGN+SSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
Subjt:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK

Query:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
        MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYP VGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
Subjt:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK

Query:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD
        KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEA DGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMAS+
Subjt:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD

XP_023530428.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita pepo subsp. pepo]3.6e-14398.15Show/hide
Query:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
        MQSKSETN+QFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEF NGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
Subjt:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK

Query:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
        MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
Subjt:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK

Query:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD
        K IKARKPYLHESRHQHAIRRTRGSGGRFTKKNEA DGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMAS+
Subjt:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD

TrEMBL top hitse value%identityAlignment
A0A6J1DK42 Nuclear transcription factor Y subunit3.1e-12487.08Show/hide
Query:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEE-DVSKEVQATGSPHSAGNYRQAAQ
        MQSKSETNNQ ESDPNG PSTS+YYEPWWRGIGYNPIPLP+VGGN SSSTSLEFPNGGSESNDGQSVSNND+NDEE DV+KEVQATGSPHSAG+YR  AQ
Subjt:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEE-DVSKEVQATGSPHSAGNYRQAAQ

Query:  KMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAE
        KMQHVSST P MHGEC  QSTQLELVGHSIACASNPYQDP YGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPV VNAKQYQGILRRRQARAKAEAE
Subjt:  KMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAE

Query:  KKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMAS
        KK IKARKPYLHESRHQHAIRRTRGSGGRF KK+EA++  EMHSD+ NE+G  LNDGS+Q+NGSS  N AS
Subjt:  KKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMAS

A0A6J1EFJ6 Nuclear transcription factor Y subunit3.8e-14398.15Show/hide
Query:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
        MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
Subjt:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK

Query:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
        MQHVSSTFPVMHGECLMQSTQLEL     ACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
Subjt:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK

Query:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD
        KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD
Subjt:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD

A0A6J1EMA6 Nuclear transcription factor Y subunit4.0e-148100Show/hide
Query:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
        MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
Subjt:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK

Query:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
        MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
Subjt:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK

Query:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD
        KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD
Subjt:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD

A0A6J1HWY5 Nuclear transcription factor Y subunit3.4e-13996.31Show/hide
Query:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
        MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLP+VGGN+SSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
Subjt:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK

Query:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
        MQHVSSTFPVMHGECLMQSTQLEL     ACASNPYQDPSYGGMMAFYGHQPLGYP VGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
Subjt:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK

Query:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD
        KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEA DGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMAS+
Subjt:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD

A0A6J1HYH4 Nuclear transcription factor Y subunit3.5e-14498.15Show/hide
Query:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
        MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLP+VGGN+SSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK
Subjt:  MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQK

Query:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
        MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYP VGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK
Subjt:  MQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEK

Query:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD
        KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEA DGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMAS+
Subjt:  KSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-78.0e-2139.78Show/hide
Query:  GNYRQAAQKMQHVSSTFP-VMHGECLMQSTQLELVG--HSIACASNPYQDPSYGGMMAFYGHQPLG--YPMVGMPHARMPLPIEIAQDPVLVNAKQYQGI
        G++ +  Q+  H     P   + E ++ S      G  +S+A    PY DP Y  + A       G    ++G+    +PLP +  ++PV VNAKQY GI
Subjt:  GNYRQAAQKMQHVSSTFP-VMHGECLMQSTQLELVG--HSIACASNPYQDPSYGGMMAFYGHQPLG--YPMVGMPHARMPLPIEIAQDPVLVNAKQYQGI

Query:  LRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTN
        LRRRQ+RA+ E++ K IK+RKPYLHESRH HAIRR RG GGRF    + D   E H D  +E   +L+ G      SS T+
Subjt:  LRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTN

Q8VY64 Nuclear transcription factor Y subunit A-41.2e-2142.77Show/hide
Query:  TGSPHS-AGNYRQAAQKMQHVSSTFP-VMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYP-----MVGMPHARMPLPIEIAQDPVL
        T S H  + N    A+K +  S T P V  G          +    +A    PY DP Y  + A   + P  YP     ++GM    +PL  +  ++PV 
Subjt:  TGSPHS-AGNYRQAAQKMQHVSSTFP-VMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYP-----MVGMPHARMPLPIEIAQDPVL

Query:  VNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRTRGSGGRF-TKKNEADDGKEMHSDEVNEN
        VNAKQY GILRRRQ+RAK EA  ++IKA+KPY+HESRH HAIRR RG GGRF   K E  D KE      +EN
Subjt:  VNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRTRGSGGRF-TKKNEADDGKEMHSDEVNEN

Q93ZH2 Nuclear transcription factor Y subunit A-33.4e-1937.9Show/hide
Query:  GNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQ----AAQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDP
        G+  ++  + F +  S S      S  +V    D +   Q + S  S     Q    A+   Q   + FP +H        Q     H        Y DP
Subjt:  GNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQ----AAQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDP

Query:  SYGGMMA--FYGHQPLGYP-MVGMPHARMPLPIEIAQ-DPVLVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRTRGSGGRF--TKK-
         YGG++A  +    P   P MV M   R+PLP E+ + DPV VNAKQY  I+RRRQ RAK EA+ K I+ARKPYLHESRH HA++R RGSGGRF  TKK 
Subjt:  SYGGMMA--FYGHQPLGYP-MVGMPHARMPLPIEIAQ-DPVLVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRTRGSGGRF--TKK-

Query:  ---NEADDGKEMHSDEVNE
           +E    +E   D++ +
Subjt:  ---NEADDGKEMHSDEVNE

Q945M9 Nuclear transcription factor Y subunit A-91.9e-4647.96Show/hide
Query:  MQSKSET-NNQFESDPNGTPSTSI-YYEPWWR-GIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQA
        M SKS++  N+ +S+ +GT S+SI    PW R     N       G  +S S +L       ESN  +S SN D      V+KE Q T SP SAG+Y   
Subjt:  MQSKSET-NNQFESDPNGTPSTSI-YYEPWWR-GIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQA

Query:  AQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACA-SNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAK
         Q+  H   T P  H          +LVGH++  A SNPYQDP Y G+M  YGH PLG+ P  GMPH+RMPLP E+AQ+PV VNAKQYQ ILRRRQARAK
Subjt:  AQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACA-SNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAK

Query:  AEAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSS
        AE EKK IK+RKPYLHESRHQHA+RR RG+GGRF KK   +  K    ++ N +       S    G +
Subjt:  AEAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSS

Q9LXV5 Nuclear transcription factor Y subunit A-11.0e-4746.77Show/hide
Query:  MQSKSETNNQFE-SDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDVS-KEVQATGSPHSAGNYRQA
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D + K+ QA  S  S  N+   
Subjt:  MQSKSETNNQFE-SDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDVS-KEVQATGSPHSAGNYRQA

Query:  AQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKA
          +    + +   MH + L+Q    ELVGH IAC  NPYQDP YGG+M  YGHQ LG+ P +GMP  R  LP+++AQ+PV VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQ
        E E+K I+ RKPYLHESRH+HA+RR R SGGRF KK+E + G++    +        + GS+Q
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQ

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A91.3e-4747.96Show/hide
Query:  MQSKSET-NNQFESDPNGTPSTSI-YYEPWWR-GIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQA
        M SKS++  N+ +S+ +GT S+SI    PW R     N       G  +S S +L       ESN  +S SN D      V+KE Q T SP SAG+Y   
Subjt:  MQSKSET-NNQFESDPNGTPSTSI-YYEPWWR-GIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQA

Query:  AQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACA-SNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAK
         Q+  H   T P  H          +LVGH++  A SNPYQDP Y G+M  YGH PLG+ P  GMPH+RMPLP E+AQ+PV VNAKQYQ ILRRRQARAK
Subjt:  AQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACA-SNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAK

Query:  AEAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSS
        AE EKK IK+RKPYLHESRHQHA+RR RG+GGRF KK   +  K    ++ N +       S    G +
Subjt:  AEAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSS

AT5G12840.1 nuclear factor Y, subunit A17.1e-4946.77Show/hide
Query:  MQSKSETNNQFE-SDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDVS-KEVQATGSPHSAGNYRQA
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D + K+ QA  S  S  N+   
Subjt:  MQSKSETNNQFE-SDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDVS-KEVQATGSPHSAGNYRQA

Query:  AQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKA
          +    + +   MH + L+Q    ELVGH IAC  NPYQDP YGG+M  YGHQ LG+ P +GMP  R  LP+++AQ+PV VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQ
        E E+K I+ RKPYLHESRH+HA+RR R SGGRF KK+E + G++    +        + GS+Q
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQ

AT5G12840.2 nuclear factor Y, subunit A13.5e-4846.39Show/hide
Query:  MQSKSETNNQFE-SDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDVS-KEVQATGSPHSAGNYRQA
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D + K+ QA  S  S  +  + 
Subjt:  MQSKSETNNQFE-SDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDVS-KEVQATGSPHSAGNYRQA

Query:  AQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKA
              + +    MH + L+Q    ELVGH IAC  NPYQDP YGG+M  YGHQ LG+ P +GMP  R  LP+++AQ+PV VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQ
        E E+K I+ RKPYLHESRH+HA+RR R SGGRF KK+E + G++    +        + GS+Q
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQ

AT5G12840.3 nuclear factor Y, subunit A17.1e-4946.77Show/hide
Query:  MQSKSETNNQFE-SDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDVS-KEVQATGSPHSAGNYRQA
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D + K+ QA  S  S  N+   
Subjt:  MQSKSETNNQFE-SDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDVS-KEVQATGSPHSAGNYRQA

Query:  AQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKA
          +    + +   MH + L+Q    ELVGH IAC  NPYQDP YGG+M  YGHQ LG+ P +GMP  R  LP+++AQ+PV VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQ
        E E+K I+ RKPYLHESRH+HA+RR R SGGRF KK+E + G++    +        + GS+Q
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQ

AT5G12840.4 nuclear factor Y, subunit A13.5e-4846.39Show/hide
Query:  MQSKSETNNQFE-SDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDVS-KEVQATGSPHSAGNYRQA
        MQSK    N+ E ++ +      +Y EPWW+   +  +P     G  S+S+SL+ PN GSESND  S S +  +N E D + K+ QA  S  S  +  + 
Subjt:  MQSKSETNNQFE-SDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNND-VNDEEDVS-KEVQATGSPHSAGNYRQA

Query:  AQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKA
              + +    MH + L+Q    ELVGH IAC  NPYQDP YGG+M  YGHQ LG+ P +GMP  R  LP+++AQ+PV VNAKQY+GILRRR+ARAKA
Subjt:  AQKMQHVSSTFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGY-PMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKA

Query:  EAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQ
        E E+K I+ RKPYLHESRH+HA+RR R SGGRF KK+E + G++    +        + GS+Q
Subjt:  EAEKKSIKARKPYLHESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCGAAATCCGAAACCAATAATCAGTTTGAATCCGATCCAAACGGTACTCCATCCACGAGTATCTATTACGAACCCTGGTGGCGTGGTATTGGATACAAC
CCTATTCCGCTACCTATGGTAGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCGAACGATGGCCAGTCGGTGTCTAATAAT
GACGTCAATGATGAAGAAGATGTTTCCAAAGAAGTTCAAGCTACTGGATCTCCACATTCTGCTGGAAATTACAGACAGGCTGCTCAGAAGATGCAGCATGTTTCA
TCTACTTTTCCAGTAATGCATGGTGAATGTCTGATGCAGTCGACACAACTCGAACTTGTAGGCCACTCTATTGCATGTGCGTCAAATCCATATCAGGATCCATCT
TATGGCGGAATGATGGCTTTTTATGGCCATCAGCCCTTGGGCTATCCTATGGTCGGAATGCCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCC
GTATTGGTGAATGCGAAGCAGTACCAAGGAATTTTGAGGAGAAGGCAAGCGCGTGCAAAAGCCGAGGCTGAGAAGAAGTCGATAAAAGCCAGAAAGCCATATCTT
CATGAGTCTAGACACCAGCATGCCATAAGAAGGACAAGGGGTAGCGGAGGGCGTTTCACCAAGAAAAACGAAGCTGATGATGGAAAGGAGATGCATTCTGATGAA
GTAAATGAGAATGGTCGCCATCTAAATGACGGTTCTAAGCAGCAGAATGGAAGCTCCTTGACGAACATGGCCTCTGATTAG
mRNA sequenceShow/hide mRNA sequence
AAATTTTTCATTTTTGGAAATTCATAGAGTTTTTCAATTCACCTTCTTAAGGGATTAATTTCTACTCTCTGTTTTTCGATTTATTACAGACAATTCTCTCTATTT
TCTCTTCGATCCTATTTGATTTTCCTGGTTTCTCCATTTCGACGTTGCTCCAATTCCCATCGGGTTTGAAGGCATGCAGTCGAAATCCGAAACCAATAATCAGTT
TGAATCCGATCCAAACGGTACTCCATCCACGAGTATCTATTACGAACCCTGGTGGCGTGGTATTGGATACAACCCTATTCCGCTACCTATGGTAGGGGGAAATGC
TTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCAGAGTCGAACGATGGCCAGTCGGTGTCTAATAATGACGTCAATGATGAAGAAGATGTTTCCAAAGA
AGTTCAAGCTACTGGATCTCCACATTCTGCTGGAAATTACAGACAGGCTGCTCAGAAGATGCAGCATGTTTCATCTACTTTTCCAGTAATGCATGGTGAATGTCT
GATGCAGTCGACACAACTCGAACTTGTAGGCCACTCTATTGCATGTGCGTCAAATCCATATCAGGATCCATCTTATGGCGGAATGATGGCTTTTTATGGCCATCA
GCCCTTGGGCTATCCTATGGTCGGAATGCCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTATTGGTGAATGCGAAGCAGTACCAAGGAAT
TTTGAGGAGAAGGCAAGCGCGTGCAAAAGCCGAGGCTGAGAAGAAGTCGATAAAAGCCAGAAAGCCATATCTTCATGAGTCTAGACACCAGCATGCCATAAGAAG
GACAAGGGGTAGCGGAGGGCGTTTCACCAAGAAAAACGAAGCTGATGATGGAAAGGAGATGCATTCTGATGAAGTAAATGAGAATGGTCGCCATCTAAATGACGG
TTCTAAGCAGCAGAATGGAAGCTCCTTGACGAACATGGCCTCTGATTAG
Protein sequenceShow/hide protein sequence
MQSKSETNNQFESDPNGTPSTSIYYEPWWRGIGYNPIPLPMVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDVSKEVQATGSPHSAGNYRQAAQKMQHVS
STFPVMHGECLMQSTQLELVGHSIACASNPYQDPSYGGMMAFYGHQPLGYPMVGMPHARMPLPIEIAQDPVLVNAKQYQGILRRRQARAKAEAEKKSIKARKPYL
HESRHQHAIRRTRGSGGRFTKKNEADDGKEMHSDEVNENGRHLNDGSKQQNGSSLTNMASD