; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G009010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G009010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpentatricopeptide repeat-containing protein At1g62350
Genome locationCmo_Chr11:4620186..4623831
RNA-Seq ExpressionCmoCh11G009010
SyntenyCmoCh11G009010
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044795 - Pentatricopeptide repeat-containing protein THA8L-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588226.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]9.4e-13898.04Show/hide
Query:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL
        MLRFAPNLLRRFSNSATSTIH+YR T CTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR
        VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR
Subjt:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK
        PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDE MCKSV+
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK

KAG7022139.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-13898.43Show/hide
Query:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL
        MLRFAPNLLRRFSNSATSTIH+YR T CTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR
        VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR
Subjt:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK
        PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDE MCKSVK
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK

XP_022930047.1 pentatricopeptide repeat-containing protein At1g62350 [Cucurbita moschata]9.1e-141100Show/hide
Query:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL
        MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR
        VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR
Subjt:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK
        PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK

XP_022966084.1 pentatricopeptide repeat-containing protein At1g62350 [Cucurbita maxima]7.5e-13596.08Show/hide
Query:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL
        MLRFAPNLLRR SNSATSTIH+YR THCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR
        VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDML MLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR
Subjt:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK
        PLSLPFRVILKGLVPYPELREQV+DDFLELFPDMIVYDPPEDLFEEDE   KSV+
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK

XP_023531705.1 pentatricopeptide repeat-containing protein At1g62350 [Cucurbita pepo subsp. pepo]1.9e-13898.04Show/hide
Query:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL
        MLRFAPNLLRRFSN ATSTIH+YR THCTFFEHHRPQQQLLLRFITGSASSPSLS+WRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR
        VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR
Subjt:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK
        PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDE MCKSVK
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK

TrEMBL top hitse value%identityAlignment
A0A1S3BQ11 pentatricopeptide repeat-containing protein At1g623501.7e-11686.96Show/hide
Query:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL
        MLR APNLLR+ S+S  S+   +R +  TF      QQQLLLRFI GSASSPSLSIWRRKKEMGKEGLIVVKELKR+QSN IRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR
        VAVLVELQRQN VFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLK EGVLFDQHTFGDI+RAYLDNAM SEAMDIYREMR+SPDR
Subjt:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKS
        PLSLPFRVILKGL+PYPELREQVKDDFLELFPDMIVYDPPEDLFEEDE   KS
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKS

A0A6J1DGX4 pentatricopeptide repeat-containing protein At1g623502.7e-11486Show/hide
Query:  MLRFAPNLLRRFSN--SATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKS
        MLR  PNLLRR  N  + T+TI  +  +  TFF+  + QQQ L RFITGSASSPSLSIWRRKKEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKS
Subjt:  MLRFAPNLLRRFSN--SATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKS

Query:  DLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSP
        DLVAVLVELQRQ QVFLCMKLYNVVRKEVWYRPDMFFYRDMLMML+KNK+VEETKQVW+DLK E VLFDQHTFGDI+RAYLDN MPSEAMDIYREMRQSP
Subjt:  DLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSP

Query:  DRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDE
        DRPLSLPFRVILKGL+PYPELREQ+KDDFLELFPDMIVYDPPEDLFEEDE
Subjt:  DRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDE

A0A6J1EQI1 pentatricopeptide repeat-containing protein At1g623504.4e-141100Show/hide
Query:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL
        MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR
        VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR
Subjt:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK
        PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK

A0A6J1HQL7 pentatricopeptide repeat-containing protein At1g623503.6e-13596.08Show/hide
Query:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL
        MLRFAPNLLRR SNSATSTIH+YR THCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR
        VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDML MLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR
Subjt:  VAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK
        PLSLPFRVILKGLVPYPELREQV+DDFLELFPDMIVYDPPEDLFEEDE   KSV+
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK

A0A7N2KMM5 Uncharacterized protein4.3e-9672.62Show/hide
Query:  MLRFAPNLLRRFSNSATS----TIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLL
        MLR A  LLR+ S+S++S      + + L+  TF      QQQ L R ++G ASSPSLSIWRRKKEMGKEGLIV KELKR++SN +RLDRFI SHVSRLL
Subjt:  MLRFAPNLLRRFSNSATS----TIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLL

Query:  KSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQ
        KSDL AVL E QRQ+QVFLCMKLY+VVRKE+WYRPDMFFYRDMLMMLA+NK V+E K+VWEDLKGE VLFDQHTFGD++RA+ D+ +PSEAM+IY EMRQ
Subjt:  KSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQ

Query:  SPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDE
        SPD P+SLPFRVILKGL+PYPELRE+VKDDFLELFP M+VYDPPEDLFE+ +
Subjt:  SPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDE

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623503.4e-8279.03Show/hide
Query:  MGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGE
        M KEGLI  KELKR+Q+  +RLDRFI SHVSRLLKSDLV+VL E QRQNQVFLCMKLY VVR+E+WYRPDMFFYRDMLMMLA+NK+V+ETK+VWEDLK E
Subjt:  MGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGE

Query:  GVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDE
         VLFDQHTFGD++R +LDN +P EAM +Y EMR+SPDRPLSLPFRVILKGLVPYPELRE+VKDDFLELFP MIVYDPPED+ E+ +
Subjt:  GVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDE

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic8.3e-0420.99Show/hide
Query:  MKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQS
        ++++ ++R+++WY+P++  Y  +++ML K K+ E+  ++++++  EG + +   +  ++ AY  +     A  +   M+ S
Subjt:  MKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQS

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic4.4e-0527.21Show/hide
Query:  MGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWEDLKG
        +  E +  ++ LKR     + L   +   + RL+KSDL++VL EL RQ+   L + + + +R E  Y P D+  Y D++  L +NK  +E  ++  ++ G
Subjt:  MGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWEDLKG

Query:  EGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQS
             D      ++RA +        + +Y  MR+S
Subjt:  EGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQS

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic4.1e-5145.24Show/hide
Query:  RPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMF
        +P    + RF  G    P   +WR KK +GKE L V+  LKR++ +  +LD+FI +HV RLLK D++AV+ EL+RQ +  L +K++ V++K+ WY+PD+F
Subjt:  RPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMF

Query:  FYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDM
         Y+D+++ LAK+KR++E   +WE +K E +  D  T+ +++R +L +  P++AM++Y +M +SPD P  LPFRV+LKGL+P+P LR +VK DF ELFP+ 
Subjt:  FYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDM

Query:  IVYDPPEDLF
          YDPPE++F
Subjt:  IVYDPPEDLF

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein2.4e-8379.03Show/hide
Query:  MGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGE
        M KEGLI  KELKR+Q+  +RLDRFI SHVSRLLKSDLV+VL E QRQNQVFLCMKLY VVR+E+WYRPDMFFYRDMLMMLA+NK+V+ETK+VWEDLK E
Subjt:  MGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGE

Query:  GVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDE
         VLFDQHTFGD++R +LDN +P EAM +Y EMR+SPDRPLSLPFRVILKGLVPYPELRE+VKDDFLELFP MIVYDPPED+ E+ +
Subjt:  GVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDE

AT3G27750.1 FUNCTIONS IN: molecular_function unknown3.1e-0627.21Show/hide
Query:  MGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWEDLKG
        +  E +  ++ LKR     + L   +   + RL+KSDL++VL EL RQ+   L + + + +R E  Y P D+  Y D++  L +NK  +E  ++  ++ G
Subjt:  MGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWEDLKG

Query:  EGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQS
             D      ++RA +        + +Y  MR+S
Subjt:  EGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQS

AT3G42570.1 peroxidase family protein6.3e-0773.53Show/hide
Query:  KKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVS
        KKE  KEGLI  KELKR+Q+NL+RLDRFI SH S
Subjt:  KKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVS

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein2.9e-5245.24Show/hide
Query:  RPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMF
        +P    + RF  G    P   +WR KK +GKE L V+  LKR++ +  +LD+FI +HV RLLK D++AV+ EL+RQ +  L +K++ V++K+ WY+PD+F
Subjt:  RPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMF

Query:  FYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDM
         Y+D+++ LAK+KR++E   +WE +K E +  D  T+ +++R +L +  P++AM++Y +M +SPD P  LPFRV+LKGL+P+P LR +VK DF ELFP+ 
Subjt:  FYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDM

Query:  IVYDPPEDLF
          YDPPE++F
Subjt:  IVYDPPEDLF

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain1.4e-1734.52Show/hide
Query:  LDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGE-GVLFDQHTFGDIMRAYLDNA
        LDR I S   RLLK D+VAVL EL RQN+  L +K++  +RKE WY+P +  Y DM+ ++A N  +EE   ++  +K E G++ +   F  ++   L++ 
Subjt:  LDRFISSHVSRLLKSDLVAVLVELQRQNQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGE-GVLFDQHTFGDIMRAYLDNA

Query:  MPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPE--LREQVKDDFLELFPDMIVYDPPEDLFEEDE
        +    MD Y  M+     P    FRV++ GL    E  L   V+ D  E + + +      +  EEDE
Subjt:  MPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPE--LREQVKDDFLELFPDMIVYDPPEDLFEEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCGATTTGCTCCAAATCTTCTTCGCAGATTCTCAAACAGTGCCACTTCCACGATCCATGTATATCGATTGACCCATTGCACGTTCTTCGAACACCATCGGCCACA
GCAACAATTGCTGTTGCGCTTCATCACTGGCTCCGCTTCGAGCCCTAGCCTCTCGATATGGAGGAGGAAGAAGGAAATGGGCAAGGAGGGGTTGATTGTAGTCAAAGAGC
TCAAGAGGATTCAGTCCAATCTCATTCGTCTCGACCGATTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGATCTTGTTGCGGTTCTCGTCGAGCTTCAGAGGCAG
AACCAGGTCTTTCTGTGCATGAAGTTGTATAACGTGGTTCGTAAAGAAGTATGGTACCGTCCCGACATGTTCTTTTATAGGGACATGCTCATGATGCTTGCGAAAAATAA
AAGGGTGGAAGAAACGAAGCAAGTTTGGGAGGATCTAAAGGGAGAGGGAGTACTATTTGATCAGCATACTTTTGGAGATATCATGCGGGCATACTTGGATAATGCAATGC
CCTCGGAGGCCATGGACATATATCGTGAAATGAGGCAATCTCCTGATAGGCCATTATCTTTACCTTTTCGTGTCATTTTGAAAGGGCTCGTTCCATACCCAGAATTGAGA
GAACAAGTTAAAGATGACTTCTTGGAGCTTTTCCCTGATATGATCGTTTATGACCCACCTGAAGACTTGTTTGAGGAAGATGAAGGTATGTGCAAGAGTGTAAAATGA
mRNA sequenceShow/hide mRNA sequence
CATTCGAACCCCGGCCAGTTCTTTTGAGTTTCACTTTCGACGGGAGCATAGCTGTGGCTGAATCGCTTCCAGGTTCCTCCAGAAGTTTGATGCTGCGATTTGCTCCAAAT
CTTCTTCGCAGATTCTCAAACAGTGCCACTTCCACGATCCATGTATATCGATTGACCCATTGCACGTTCTTCGAACACCATCGGCCACAGCAACAATTGCTGTTGCGCTT
CATCACTGGCTCCGCTTCGAGCCCTAGCCTCTCGATATGGAGGAGGAAGAAGGAAATGGGCAAGGAGGGGTTGATTGTAGTCAAAGAGCTCAAGAGGATTCAGTCCAATC
TCATTCGTCTCGACCGATTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGATCTTGTTGCGGTTCTCGTCGAGCTTCAGAGGCAGAACCAGGTCTTTCTGTGCATG
AAGTTGTATAACGTGGTTCGTAAAGAAGTATGGTACCGTCCCGACATGTTCTTTTATAGGGACATGCTCATGATGCTTGCGAAAAATAAAAGGGTGGAAGAAACGAAGCA
AGTTTGGGAGGATCTAAAGGGAGAGGGAGTACTATTTGATCAGCATACTTTTGGAGATATCATGCGGGCATACTTGGATAATGCAATGCCCTCGGAGGCCATGGACATAT
ATCGTGAAATGAGGCAATCTCCTGATAGGCCATTATCTTTACCTTTTCGTGTCATTTTGAAAGGGCTCGTTCCATACCCAGAATTGAGAGAACAAGTTAAAGATGACTTC
TTGGAGCTTTTCCCTGATATGATCGTTTATGACCCACCTGAAGACTTGTTTGAGGAAGATGAAGGTATGTGCAAGAGTGTAAAATGATCGAGGAAATGGCTGATACGGTA
GCTTCTTTGTTGTCTTTTTATACTTACAGTTGCATTTAATAGGTTTTTAAACTAAAAAAAATCCATTAGGTATTGCATCGAGTTGGTCCGTGAACTTTAAAAGTGCCTAA
TAAGATTCTAAACTTTCTTTTAGATACAAAATATACATTCTACTATTAGATACGAAGTCAAAAAGTTAGGGGGTTTAGCAACACTAAATCCAATTGTGTGTTTATTAAGT
TTGTGAGTCGCTTTTAAACTTGAGAAATCTCCTTGTCTGTGAAAGGTCGGAAACAAACTTGTAGTTTAACAACAGGTTGGGATCATGTAATCGCTCGATAGGATACTCGC
CCGTCTACTATGTTCGGTGATCCTTTTGCTGATTGATACAGTCTCAAAGCATTGCTCATTTTTGCCATATTTGTACTTTTTATGAAATTTTACATTTTTAATACAATATA
ACTTTTCAATTTGGG
Protein sequenceShow/hide protein sequence
MLRFAPNLLRRFSNSATSTIHVYRLTHCTFFEHHRPQQQLLLRFITGSASSPSLSIWRRKKEMGKEGLIVVKELKRIQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQ
NQVFLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWEDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYREMRQSPDRPLSLPFRVILKGLVPYPELR
EQVKDDFLELFPDMIVYDPPEDLFEEDEGMCKSVK