; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G009160 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G009160
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCmo_Chr11:4728050..4730261
RNA-Seq ExpressionCmoCh11G009160
SyntenyCmoCh11G009160
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139075.1 chlorophyll a-b binding protein 8, chloroplastic [Cucumis sativus]2.2e-13791.61Show/hide
Query:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQALV SSSLTSSVGAARQRLG +PS GSSRK+ASFVVRAEATPPVKQGA+RQL              LPGD+GFDPLGLSDPEGTGGFIEPRWLAYG
Subjt:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDW  PGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_008450298.1 PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Cucumis melo]9.0e-13690.51Show/hide
Query:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQALV SSSLTSSVGAARQRLG KPS GSSRK+ASFVVRA ATPPVKQGA+RQL              LPGD+GFDPLGLSDPEGTGGFIEP+WLAYG
Subjt:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDW  PGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_022933380.1 chlorophyll a-b binding protein 8, chloroplastic [Cucurbita moschata]4.0e-14494.89Show/hide
Query:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL              LPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
Subjt:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_023006167.1 chlorophyll a-b binding protein 8, chloroplastic [Cucurbita maxima]4.5e-14394.16Show/hide
Query:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL              LPGDYGFDPLGLSDPEGTGGFIEP+WLAYG
Subjt:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

XP_038879830.1 photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Benincasa hispida]1.3e-13791.24Show/hide
Query:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQALV SSSLTSSVGAARQRLG KPS GSSRKAASFVVRAEATPPVKQGA+RQL              LPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
Subjt:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDW  PGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

TrEMBL top hitse value%identityAlignment
A0A0A0LXV0 Chlorophyll a-b binding protein, chloroplastic1.0e-13791.61Show/hide
Query:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQALV SSSLTSSVGAARQRLG +PS GSSRK+ASFVVRAEATPPVKQGA+RQL              LPGD+GFDPLGLSDPEGTGGFIEPRWLAYG
Subjt:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDW  PGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A1S3BPK7 Chlorophyll a-b binding protein, chloroplastic4.4e-13690.51Show/hide
Query:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQALV SSSLTSSVGAARQRLG KPS GSSRK+ASFVVRA ATPPVKQGA+RQL              LPGD+GFDPLGLSDPEGTGGFIEP+WLAYG
Subjt:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDW  PGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A5D3DX73 Chlorophyll a-b binding protein, chloroplastic4.4e-13690.51Show/hide
Query:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQALV SSSLTSSVGAARQRLG KPS GSSRK+ASFVVRA ATPPVKQGA+RQL              LPGD+GFDPLGLSDPEGTGGFIEP+WLAYG
Subjt:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDW  PGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A6J1F4Q9 Chlorophyll a-b binding protein, chloroplastic2.0e-14494.89Show/hide
Query:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL              LPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
Subjt:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

A0A6J1KV56 Chlorophyll a-b binding protein, chloroplastic2.2e-14394.16Show/hide
Query:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL              LPGDYGFDPLGLSDPEGTGGFIEP+WLAYG
Subjt:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

SwissProt top hitse value%identityAlignment
P27521 Chlorophyll a-b binding protein 4, chloroplastic2.6e-3742.86Show/hide
Query:  LTSSVGAARQRLGPKPSLGSSRKAASFVVRAE--------ATPPVKQGANRQLCLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAAGA
        LT S G   + L    S+GSS K +SF V A+        A+P    G+     L GD GFDPLGL+ DPE        +W    E++NGR+AMLG AG 
Subjt:  LTSSVGAARQRLGPKPSLGSSRKAASFVVRAE--------ATPPVKQGANRQLCLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAAGA

Query:  IAPEIFGSLGLI-PPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMG-----KQYFLGLEKFLGGSGDPAYPGGPLFNP
        + PE+F  +G+I  PE    W+       AG   Y+A   TLFV E  L  + E RR+QD  NPGS+      KQY L         G+  YPGG +FNP
Subjt:  IAPEIFGSLGLI-PPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMG-----KQYFLGLEKFLGGSGDPAYPGGPLFNP

Query:  LGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVL
        L F   +    E K KE+ NGRLAMLA LG+ +Q  VTG GP++NLL HLSDP +N ++
Subjt:  LGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVL

P27522 Chlorophyll a-b binding protein 8, chloroplastic5.7e-12582.85Show/hide
Query:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLC-------------LPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MATQAL+SSSS+++S  AARQ +G + S   +RK ASFVVRA +TPPVKQGANRQL              LPGD+GFDPLGLSDPEGTGGFIEP+WLAYG
Subjt:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLC-------------LPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
        EVINGRFAMLGAAGAIAPEI G  GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDW  PGSMGKQYFLGLEK LGGSGDPA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQ LVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Q32904 Chlorophyll a-b binding protein 3, chloroplastic2.0e-11778.42Show/hide
Query:  MATQALVSSSSLTSSVGAARQRLGPK---PSLGSSRKAASFVVRAEATPPVKQG--------ANRQL------CLPGDYGFDPLGLSDPEGTGGFIEPRW
        MATQALVSSSSLT +  A RQ    +    S+G SRK    +VRA ATPPVKQG        A++Q        LPGDYGFDPLGLSDPEGTGGFIEPRW
Subjt:  MATQALVSSSSLTSSVGAARQRLGPK---PSLGSSRKAASFVVRAEATPPVKQG--------ANRQL------CLPGDYGFDPLGLSDPEGTGGFIEPRW

Query:  LAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGS
        LAYGEVINGRFAMLGA GAIAPE  G +GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDW  PGSMGKQYFLGLEK  GGS
Subjt:  LAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGS

Query:  GDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        G+PAYPGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILGYFIQGLVTGVGPYQNLLDH++DPVNNNVLTSLKFH
Subjt:  GDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Q9C639 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic1.9e-4044.88Show/hide
Query:  LPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE
        L GDYGFDPLGL  DPE        +W    E+++ RFAMLG AG +  ++  + G+      LP W++ G +     +++ A   TL V +  LMGFAE
Subjt:  LPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE

Query:  HRRFQDWYNPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN
         +R+ D+ +PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  + KLKEIKNGRLAM+A+LG+F+Q  VT  GP  NL++HLS+P +  
Subjt:  HRRFQDWYNPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN

Query:  VLTSL
        ++ +L
Subjt:  VLTSL

Q9SY97 Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic2.0e-12582.48Show/hide
Query:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MA QALV SSSLTSSV  ARQ  G KP   +S+K +SFVV+A ATPPVKQGANR L              LPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
Subjt:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
        E+INGRFAMLGAAGAIAPEI G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDWYNPGSMGKQYFLGLEK L GSG+PA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILGYFIQGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

Arabidopsis top hitse value%identityAlignment
AT1G45474.1 photosystem I light harvesting complex gene 51.4e-4144.88Show/hide
Query:  LPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE
        L GDYGFDPLGL  DPE        +W    E+++ RFAMLG AG +  ++  + G+      LP W++ G +     +++ A   TL V +  LMGFAE
Subjt:  LPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE

Query:  HRRFQDWYNPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN
         +R+ D+ +PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  + KLKEIKNGRLAM+A+LG+F+Q  VT  GP  NL++HLS+P +  
Subjt:  HRRFQDWYNPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN

Query:  VLTSL
        ++ +L
Subjt:  VLTSL

AT1G45474.2 photosystem I light harvesting complex gene 51.4e-4144.88Show/hide
Query:  LPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE
        L GDYGFDPLGL  DPE        +W    E+++ RFAMLG AG +  ++  + G+      LP W++ G +     +++ A   TL V +  LMGFAE
Subjt:  LPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE

Query:  HRRFQDWYNPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN
         +R+ D+ +PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  + KLKEIKNGRLAM+A+LG+F+Q  VT  GP  NL++HLS+P +  
Subjt:  HRRFQDWYNPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN

Query:  VLTSL
        ++ +L
Subjt:  VLTSL

AT1G61520.1 photosystem I light harvesting complex gene 31.4e-12682.48Show/hide
Query:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MA QALV SSSLTSSV  ARQ  G KP   +S+K +SFVV+A ATPPVKQGANR L              LPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
Subjt:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
        E+INGRFAMLGAAGAIAPEI G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDWYNPGSMGKQYFLGLEK L GSG+PA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILGYFIQGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH

AT1G61520.2 photosystem I light harvesting complex gene 31.7e-11191.67Show/hide
Query:  LPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHR
        LPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE+INGRFAMLGAAGAIAPEI G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHR
Subjt:  LPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHR

Query:  RFQDWYNPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTS
        R QDWYNPGSMGKQYFLGLEK L GSG+PAYPGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILGYFIQGLVTGVGPYQNLLDHL+DPVNNNVLTS
Subjt:  RFQDWYNPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTS

Query:  LKFH
        LKFH
Subjt:  LKFH

AT1G61520.3 photosystem I light harvesting complex gene 31.4e-12682.48Show/hide
Query:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
        MA QALV SSSLTSSV  ARQ  G KP   +S+K +SFVV+A ATPPVKQGANR L              LPGDYGFDPLGLSDPEGTGGFIEPRWLAYG
Subjt:  MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQL-------------CLPGDYGFDPLGLSDPEGTGGFIEPRWLAYG

Query:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA
        E+INGRFAMLGAAGAIAPEI G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDWYNPGSMGKQYFLGLEK L GSG+PA
Subjt:  EVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPA

Query:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
        YPGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILGYFIQGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Subjt:  YPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTCAGGCTCTTGTTTCATCCTCGTCTCTAACCTCTTCAGTGGGCGCTGCCAGACAGCGATTAGGACCAAAGCCCTCCCTTGGTTCCTCCAGAAAGGCCGCTTC
TTTCGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGCAAGGAGCTAACAGACAATTATGTCTTCCGGGCGATTACGGGTTCGATCCATTGGGACTATCAGACCCCGAGG
GCACAGGAGGGTTCATCGAGCCGAGATGGTTGGCATACGGCGAGGTGATCAACGGGAGGTTCGCGATGTTAGGAGCCGCAGGAGCCATTGCCCCAGAGATCTTTGGATCA
CTAGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACTGGAGTGATCCCACCAGCAGGAACCTACAACTACTGGGCAGACCCCTACACACTGTTTGTGTTTGA
GATGGCTCTAATGGGTTTTGCTGAACACAGAAGATTTCAAGATTGGTACAACCCAGGATCCATGGGAAAGCAATACTTCTTAGGGTTAGAGAAGTTCTTGGGTGGGTCAG
GTGACCCAGCTTACCCAGGTGGCCCCTTGTTCAACCCTTTAGGGTTTGGAAAAGATGAGAAATCAATGAAGGAATTGAAGCTGAAGGAGATCAAGAATGGGAGGCTTGCA
ATGTTGGCTATCTTGGGTTACTTCATACAAGGCCTTGTCACTGGTGTTGGCCCTTACCAAAACCTTTTGGACCATTTGTCTGACCCTGTCAACAACAACGTTTTGACAAG
CCTTAAGTTCCACTAG
mRNA sequenceShow/hide mRNA sequence
AACCAGTGGCTTATCTCTTTCCTTCCTATTTCCATTTTAGCCTTCTTCCCTCTCCTCTCGCATCACTCCACTGCCCATTTTGAAGCCTGCTTCTCTGCAACAAAGCTATG
GCCACTCAGGCTCTTGTTTCATCCTCGTCTCTAACCTCTTCAGTGGGCGCTGCCAGACAGCGATTAGGACCAAAGCCCTCCCTTGGTTCCTCCAGAAAGGCCGCTTCTTT
CGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGCAAGGAGCTAACAGACAATTATGTCTTCCGGGCGATTACGGGTTCGATCCATTGGGACTATCAGACCCCGAGGGCA
CAGGAGGGTTCATCGAGCCGAGATGGTTGGCATACGGCGAGGTGATCAACGGGAGGTTCGCGATGTTAGGAGCCGCAGGAGCCATTGCCCCAGAGATCTTTGGATCACTA
GGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACTGGAGTGATCCCACCAGCAGGAACCTACAACTACTGGGCAGACCCCTACACACTGTTTGTGTTTGAGAT
GGCTCTAATGGGTTTTGCTGAACACAGAAGATTTCAAGATTGGTACAACCCAGGATCCATGGGAAAGCAATACTTCTTAGGGTTAGAGAAGTTCTTGGGTGGGTCAGGTG
ACCCAGCTTACCCAGGTGGCCCCTTGTTCAACCCTTTAGGGTTTGGAAAAGATGAGAAATCAATGAAGGAATTGAAGCTGAAGGAGATCAAGAATGGGAGGCTTGCAATG
TTGGCTATCTTGGGTTACTTCATACAAGGCCTTGTCACTGGTGTTGGCCCTTACCAAAACCTTTTGGACCATTTGTCTGACCCTGTCAACAACAACGTTTTGACAAGCCT
TAAGTTCCACTAGAATGGATGTGTGGTTTGTAATTTGTGTATTATAAAATTGTCTCCCACTCTCTATTGTAACATGAATTGAGGATATTGGCTTCGTTTCTTTTATTAGA
GTTCGATTTCACCTCGGTTGGAGAAGGGAATGAAGCATTCCTTCTAAGGGGGTGAAAATCTCTCCCTCCCTAATAAACCTGTTTTAAAATCAGATACGTAATGGGCTAAA
ACGGACAATATCTACTAGCAGTATTTAATGTCACAAACAGTGGGGATAATGATTGTACACTAAAATGGACAATATCTACTAGCAGTATT
Protein sequenceShow/hide protein sequence
MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLCLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGS
LGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLA
MLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH