; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G010190 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G010190
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCytochrome b6
Genome locationCmo_Chr11:5545057..5546126
RNA-Seq ExpressionCmoCh11G010190
SyntenyCmoCh11G010190
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0022904 - respiratory electron transport chain (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0045158 - electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR005797 - Cytochrome b/b6, N-terminal
IPR016174 - Di-haem cytochrome, transmembrane
IPR027387 - Cytochrome b/b6-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QXV93052.1 cytochrome b6 [Dipterocarpus intricatus]3.0e-4787.74Show/hide
Query:  NSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRT
        NSHIRFLEG   WF YLN+VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAFASVQYIMTEANFGWLIR+
Subjt:  NSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRT

Query:  VHRWSA
        VHRWSA
Subjt:  VHRWSA

QXV93466.1 cytochrome b6 [Shorea leprosula]3.0e-4787.74Show/hide
Query:  NSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRT
        NSHIRFLEG   WF YLN+VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAFASVQYIMTEANFGWLIR+
Subjt:  NSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRT

Query:  VHRWSA
        VHRWSA
Subjt:  VHRWSA

YP_009484237.1 PetB [Ailanthus altissimus]1.0e-4786.24Show/hide
Query:  MRRNSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWL
        M  NSHIRF EG  PWF YLN+VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAFASVQYIMTEANFGWL
Subjt:  MRRNSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWL

Query:  IRTVHRWSA
        IR+VHRWSA
Subjt:  IRTVHRWSA

YP_009750707.1 cytochrome b6 [Dipterocarpus turbinatus]3.0e-4787.74Show/hide
Query:  NSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRT
        NSHIRFLEG   WF YLN+VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAFASVQYIMTEANFGWLIR+
Subjt:  NSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRT

Query:  VHRWSA
        VHRWSA
Subjt:  VHRWSA

YP_009996399.1 cytochrome b6 [Euscaphis japonica]1.7e-4787.74Show/hide
Query:  NSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRT
        NSHIRF EG F WF YLN+VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAFASVQYIMTEANFGWLIR+
Subjt:  NSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRT

Query:  VHRWSA
        VHRWSA
Subjt:  VHRWSA

TrEMBL top hitse value%identityAlignment
A0A2R3VHH2 Cytochrome b64.9e-4886.24Show/hide
Query:  MRRNSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWL
        M  NSHIRF EG  PWF YLN+VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAFASVQYIMTEANFGWL
Subjt:  MRRNSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWL

Query:  IRTVHRWSA
        IR+VHRWSA
Subjt:  IRTVHRWSA

A0A2Z2CD56 Cytochrome b6 (Fragment)9.3e-4785.85Show/hide
Query:  NSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRT
        NSHIRF EG F W  YLN+VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAF+SVQYIMTEANFGWLIR+
Subjt:  NSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRT

Query:  VHRWSA
        VHRWSA
Subjt:  VHRWSA

A0A4Y5PQS2 Cytochrome b62.7e-4687.38Show/hide
Query:  IRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVHR
        I+F EG FPWF YLN+VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAFASVQYIMTEANFGWLIR+VHR
Subjt:  IRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVHR

Query:  WSA
        WSA
Subjt:  WSA

A0A6G7S8S9 Cytochrome b61.4e-4787.74Show/hide
Query:  NSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRT
        NSHIRFLEG   WF YLN+VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAFASVQYIMTEANFGWLIR+
Subjt:  NSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRT

Query:  VHRWSA
        VHRWSA
Subjt:  VHRWSA

A0A7H0R2M9 Cytochrome b68.4e-4887.74Show/hide
Query:  NSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRT
        NSHIRF EG F WF YLN+VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAFASVQYIMTEANFGWLIR+
Subjt:  NSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRT

Query:  VHRWSA
        VHRWSA
Subjt:  VHRWSA

SwissProt top hitse value%identityAlignment
A0A365 Cytochrome b68.7e-4287.78Show/hide
Query:  LNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVHRWSA
        +++VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAFASVQYIMTEANFGWLIR+VHRWSA
Subjt:  LNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVHRWSA

P56773 Cytochrome b68.7e-4287.78Show/hide
Query:  LNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVHRWSA
        +++VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAFASVQYIMTEANFGWLIR+VHRWSA
Subjt:  LNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVHRWSA

Q49KW8 Cytochrome b68.7e-4287.78Show/hide
Query:  LNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVHRWSA
        +++VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAFASVQYIMTEANFGWLIR+VHRWSA
Subjt:  LNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVHRWSA

Q4VZI6 Cytochrome b68.7e-4287.78Show/hide
Query:  LNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVHRWSA
        +++VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAFASVQYIMTEANFGWLIR+VHRWSA
Subjt:  LNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVHRWSA

Q8S8W0 Cytochrome b68.7e-4287.78Show/hide
Query:  LNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVHRWSA
        +++VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAFASVQYIMTEANFGWLIR+VHRWSA
Subjt:  LNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVHRWSA

Arabidopsis top hitse value%identityAlignment
AT2G07727.1 Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal1.5e-0431.67Show/hide
Query:  PPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVH
        P +++ ++  G +   C ++Q+ T   +  +Y P V  AF SV++IM +   GWL+R +H
Subjt:  PPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVH

ATCG00720.1 photosynthetic electron transfer B6.2e-4387.78Show/hide
Query:  LNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVHRWSA
        +++VYDWF+ERLEIQ I +DITSKYVPPHVNIFYCLGGITLTCFLVQVAT FAM FYYRPTV EAFASVQYIMTEANFGWLIR+VHRWSA
Subjt:  LNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVHRWSA

ATMG00220.1 apocytochrome b1.5e-0431.67Show/hide
Query:  PPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVH
        P +++ ++  G +   C ++Q+ T   +  +Y P V  AF SV++IM +   GWL+R +H
Subjt:  PPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACGAAATTCTCATATACGGTTCTTAGAGGGGGGGTTTCCTTGGTTTCTCTATCTCAATGAAGTGTATGATTGGTTCAAAGAACGTCTTGAGATTCAGGTGATTGT
AAATGATATAACTAGCAAATACGTTCCTCCTCACGTCAACATATTTTATTGTTTAGGAGGAATTACGCTTACTTGTTTTTTAGTACAAGTAGCTACGGAGTTTGCTATGA
TTTTTTACTATCGTCCGACCGTTGCTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCTAACTTTGGTTGGTTAATCCGAACAGTTCATAGATGGTCGGCAAAG
AGGTCAAACCCCTCATGTGAGAAGAACAACTTGATCGAATCCCCGAAAAGGAAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACGAAATTCTCATATACGGTTCTTAGAGGGGGGGTTTCCTTGGTTTCTCTATCTCAATGAAGTGTATGATTGGTTCAAAGAACGTCTTGAGATTCAGGTGATTGT
AAATGATATAACTAGCAAATACGTTCCTCCTCACGTCAACATATTTTATTGTTTAGGAGGAATTACGCTTACTTGTTTTTTAGTACAAGTAGCTACGGAGTTTGCTATGA
TTTTTTACTATCGTCCGACCGTTGCTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCTAACTTTGGTTGGTTAATCCGAACAGTTCATAGATGGTCGGCAAAG
AGGTCAAACCCCTCATGTGAGAAGAACAACTTGATCGAATCCCCGAAAAGGAAAAAGTAA
Protein sequenceShow/hide protein sequence
MRRNSHIRFLEGGFPWFLYLNEVYDWFKERLEIQVIVNDITSKYVPPHVNIFYCLGGITLTCFLVQVATEFAMIFYYRPTVAEAFASVQYIMTEANFGWLIRTVHRWSAK
RSNPSCEKNNLIESPKRKK