| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_021981732.1 DNA-directed RNA polymerase II subunit RPB7 isoform X2 [Helianthus annuus] | 4.0e-78 | 91.14 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKLIPDDM
MFFHIVLERN QLHPRHFGR LR+ LV+KLMK+VEGTCSGRHGFVVAITGIE VGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEA VSMVNKLIPDDM
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKLIPDDM
Query: EFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSS
EFQSGD+PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFC+GTIKDDF+GVI+DP +
Subjt: EFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSS
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| XP_022933500.1 DNA-directed RNA polymerase II subunit RPB7-like [Cucurbita moschata] | 3.5e-82 | 90.34 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
Query: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
Subjt: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
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| XP_023007697.1 DNA-directed RNA polymerase II subunit RPB7-like [Cucurbita maxima] | 7.8e-82 | 89.77 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
Query: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPS+A
Subjt: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
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| XP_026392284.1 DNA-directed RNA polymerase II subunit RPB7 isoform X2 [Papaver somniferum] | 2.4e-78 | 90.57 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKLIPDDM
MFFHIVLERN QLHPRHFG LRD LV KLMK+VEGTCSGRHGFVVAITG++ VGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEA V+MVNKLIPDDM
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKLIPDDM
Query: EFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
EFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFC+GTIKDDF+GVINDP +A
Subjt: EFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
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| XP_031742311.1 DNA-directed RNA polymerase II subunit RPB7 isoform X2 [Cucumis sativus] | 1.2e-79 | 91.19 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKLIPDDM
MFFHIVLERN QLHPRHFGR LR++LV+KLMK+VEGTCSGRHGFVVAITGIE +GKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEA V+MVNKLIPDDM
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKLIPDDM
Query: EFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
EFQSGD+PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFC+GTIKDDF+GVINDPS+A
Subjt: EFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9FXE3 SHS2_Rpb7-N domain-containing protein | 2.3e-79 | 90.57 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKLIPDDM
MFFHIVLERN QLHPRHFGR LRD++V+KLMK+VEGTCSGRHGFVVAITGIE +GKGLIRDGTGFV+FPVKYQCVVFRPFKGEILEA V+MVNKLIPDDM
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKLIPDDM
Query: EFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
EFQSGD+PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFC+GTIKDDF+GVINDPS A
Subjt: EFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
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| A0A6J1CIV0 DNA-directed RNA polymerase II subunit RPB7 | 8.2e-77 | 82.95 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
MFFHIVLERN QLHPRHFGR LR++LV+KLMK+VEGTCSGRHGFVVAITGIE +GKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEA VSMVNK
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
Query: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFC+GTIKDDF+GVINDP++A
Subjt: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
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| A0A6J1F518 DNA-directed RNA polymerase II subunit RPB7-like | 1.7e-82 | 90.34 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
Query: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
Subjt: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
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| A0A6J1JSG6 DNA-directed RNA polymerase II subunit RPB7-like | 8.2e-77 | 82.39 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
MFFHIVLERN QLHPRHFGR LR++LVTKLMK+VEGTCSGRHGFVVAITGIE +GKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEA V+MVNK
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
Query: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
LIPDDMEFQSGD+PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFC+GTIKDDF+GVINDP++A
Subjt: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
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| A0A6J1KZF3 DNA-directed RNA polymerase II subunit RPB7-like | 3.8e-82 | 89.77 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
Query: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPS+A
Subjt: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P38421 DNA-directed RNA polymerase II subunit 7 | 1.6e-74 | 77.84 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
MFFHIVLERN QLHPR FGR L+++LV+KLMK+VEGTCSGRHGFVVAITGI+ +GKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEA V++VNK
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
Query: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
LIPDDMEFQ+GD+PNYTTSDGSVKIQK+ EVRLKIIGTRVDAT IFCVGTIKDDF+GVINDP++A
Subjt: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
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| P46279 DNA-directed RNA polymerase II subunit RPB7 | 7.1e-78 | 81.14 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
MFFHIVLERN QLHPR+FGR LRD+LV+KLMK+VEGTCSGRHGFVVA+TGIE +GKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEA V+MVNK
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
Query: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSS
LIPDDMEFQSGD+PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFC+GTIKDDF+GVINDP++
Subjt: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSS
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| P62487 DNA-directed RNA polymerase II subunit RPB7 | 4.8e-42 | 46.51 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKL-----
MF+HI LE LHPR+FG L +++ KL EVEGTC+G++GFV+A+T I+ +G G+I+ G GFV +PVKY+ +VFRPFKGE+++A V+ VNK+
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKL-----
Query: ------------IPDDMEFQ-SGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVIN
IP +MEF + + P Y T D + IQ+D E+RLKI+GTRVD +IF +G++ DD++G+++
Subjt: ------------IPDDMEFQ-SGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVIN
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| Q5E9B8 DNA-directed RNA polymerase II subunit RPB7 | 4.8e-42 | 46.51 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKL-----
MF+HI LE LHPR+FG L +++ KL EVEGTC+G++GFV+A+T I+ +G G+I+ G GFV +PVKY+ +VFRPFKGE+++A V+ VNK+
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKL-----
Query: ------------IPDDMEFQ-SGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVIN
IP +MEF + + P Y T D + IQ+D E+RLKI+GTRVD +IF +G++ DD++G+++
Subjt: ------------IPDDMEFQ-SGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVIN
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| Q7ZW41 DNA-directed RNA polymerase II subunit RPB7 | 4.8e-42 | 47.09 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKL-----
MF+HI LE LHPR+FG L +++ KL EVEGTC+G++GFV+A+T I+ +G G+I+ G GFV +PVKY+ +VFRPFKGE+++A V+ VNK+
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKL-----
Query: ------------IPDDMEFQ-SGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVIN
IP +MEF + + P Y T D V IQ+D E+RLKI+GTRVD +IF +G++ DD++G+++
Subjt: ------------IPDDMEFQ-SGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVIN
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G06790.1 RNA polymerase Rpb7 N-terminal domain-containing protein | 2.2e-05 | 31.03 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEA
MF+ LE + ++ P L D++ + L G V+I I+ V G + G G T+ V + VVFRPF GE++ A
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEA
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| AT1G06790.2 RNA polymerase Rpb7 N-terminal domain-containing protein | 2.2e-05 | 31.03 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEA
MF+ LE + ++ P L D++ + L G V+I I+ V G + G G T+ V + VVFRPF GE++ A
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEA
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| AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain | 9.7e-06 | 38.46 | Show/hide |
Query: GFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK
G+++ T +E +G+G I++ TG + FPV + + F+ FKGEI+ V V+K
Subjt: GFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK
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| AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain | 3.2e-09 | 24.44 | Show/hide |
Query: MFFHIVLERNTQLHPRHF---GRGLRDSLVTKLMKEVEGTCSGRH-GFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKLI
MF + L N + + G L+ +++ +L++ + + G+ VA+T ++K+G+G IR+ TG V FPV + + F+ FKGEI+ +V+K++
Subjt: MFFHIVLERNTQLHPRHF---GRGLRDSLVTKLMKEVEGTCSGRH-GFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNKLI
Query: PDDMEFQSGDIPN----YT---------------TSDGSVKIQKDSEVRLKIIGTR--VDATEIFCVGTIKDDFMGVIND
+ + G I N YT ++ + +IQ ++ VR+ +IG + E + +++ D++G +++
Subjt: PDDMEFQSGDIPN----YT---------------TSDGSVKIQKDSEVRLKIIGTR--VDATEIFCVGTIKDDFMGVIND
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| AT5G59180.1 DNA-directed RNA polymerase II | 1.2e-75 | 77.84 | Show/hide |
Query: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
MFFHIVLERN QLHPR FGR L+++LV+KLMK+VEGTCSGRHGFVVAITGI+ +GKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEA V++VNK
Subjt: MFFHIVLERNTQLHPRHFGRGLRDSLVTKLMKEVEGTCSGRHGFVVAITGIEKVGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAFVSMVNK------
Query: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
LIPDDMEFQ+GD+PNYTTSDGSVKIQK+ EVRLKIIGTRVDAT IFCVGTIKDDF+GVINDP++A
Subjt: -----------LIPDDMEFQSGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCVGTIKDDFMGVINDPSSA
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