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CmoCh11G010380 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G010380
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr11:5707007..5707940
RNA-Seq ExpressionCmoCh11G010380
SyntenyCmoCh11G010380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588364.1 hypothetical protein SDJN03_16929, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4098.84Show/hide
Query:  MGRSPFLSILLLSLLIAPCFTNGFGGKMRMMEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPPPLRG
        MGRSPFLSILLLSLLIAPCFTNGFGGKMRMMEGVDTHHGSSVELKESGEEMRRRMMMMET DYSDPEPNTNVKGGGYVSPPPPLRG
Subjt:  MGRSPFLSILLLSLLIAPCFTNGFGGKMRMMEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPPPLRG

KAG6659311.1 hypothetical protein CIPAW_03G025300 [Carya illinoinensis]1.4e-0853.66Show/hide
Query:  MGRSPFLSILLLSLLIAPCFTNGFGGKMRMMEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPP
        MGRS FLSILL S L+  CF++GFG K  +ME V+ H  S+  ++ES     RR  M+E  DYSDP PNTN K G   SPPP
Subjt:  MGRSPFLSILLLSLLIAPCFTNGFGGKMRMMEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPP

PON65370.1 hypothetical protein PanWU01x14_116840 [Parasponia andersonii]6.2e-0947.67Show/hide
Query:  MGRSPFLSILLLSLLIAPCFTNGFGGK-MRMMEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPPPLR
        MGR  F +ILL+SL +   F++GFG + ++ +EG    H SSVE+KE+G    R   M+E TDYS+PEPNTN + G   +PPP  R
Subjt:  MGRSPFLSILLLSLLIAPCFTNGFGGK-MRMMEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPPPLR

XP_011652234.1 uncharacterized protein LOC105435001 [Cucumis sativus]4.3e-1868.24Show/hide
Query:  MGRSPFLSI-LLLSLLIAPCFTNGFGGKMRM-MEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPPP
        MGRS FLSI LLLS LI  CF+NGFG  +RM +E +D+HH S V L+ESG +   RMM MET DY+DPEPNTNVK GGYVSPPPP
Subjt:  MGRSPFLSI-LLLSLLIAPCFTNGFGGKMRM-MEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPPP

XP_041004488.1 uncharacterized protein LOC121249761 isoform X2 [Juglans microcarpa x Juglans regia]2.4e-0850Show/hide
Query:  MGRSPFLSILLLSLLIAPCFTNGFGGKMRMMEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPP
        MGRS FL+ILL+S L+  CF++GFG K  +ME V+ H  S+  ++ES   + +  MM+E  DYSDP PNTN + G   SPPP
Subjt:  MGRSPFLSILLLSLLIAPCFTNGFGGKMRMMEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPP

TrEMBL top hitse value%identityAlignment
A0A0A0LCS0 Uncharacterized protein2.1e-1868.24Show/hide
Query:  MGRSPFLSI-LLLSLLIAPCFTNGFGGKMRM-MEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPPP
        MGRS FLSI LLLS LI  CF+NGFG  +RM +E +D+HH S V L+ESG +   RMM MET DY+DPEPNTNVK GGYVSPPPP
Subjt:  MGRSPFLSI-LLLSLLIAPCFTNGFGGKMRM-MEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPPP

A0A2P5CWE3 Uncharacterized protein3.0e-0947.67Show/hide
Query:  MGRSPFLSILLLSLLIAPCFTNGFGGK-MRMMEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPPPLR
        MGR  F +ILL+SL +   F++GFG + ++ +EG    H SSVE+KE+G    R   M+E TDYS+PEPNTN + G   +PPP  R
Subjt:  MGRSPFLSILLLSLLIAPCFTNGFGGK-MRMMEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPPPLR

A0A2P5FF06 Uncharacterized protein5.7e-0845.98Show/hide
Query:  MGRSPFLSILLLSLLIAPCFTNGFGGK-MRMMEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPPPLRG
        MGR  F +ILL+S  +   F++GFG + ++ +EG      SSVE+KE+G    R   M+E TDYS+PEPNTN +  GY+  PPP  G
Subjt:  MGRSPFLSILLLSLLIAPCFTNGFGGK-MRMMEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPPPLRG

A0A5N6QY91 Uncharacterized protein1.3e-0750.6Show/hide
Query:  MGRSPFLSILLLSLLIAPCFTNGFGGKMRMMEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPPP
        MGR  FL ILLLS L+  CF++GFG K  +ME V  H  S V+++E+  E R    M E  DY DP PNTN K G   SPP P
Subjt:  MGRSPFLSILLLSLLIAPCFTNGFGGKMRMMEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPPP

A0A803RBM8 Uncharacterized protein3.7e-0746.43Show/hide
Query:  MGRSPFLSILLLSLLIAPCFTNGFGGKMRMMEGVDTHHGSSVELKES--GEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPP
        MGR+ F +ILL+S LI   F+ GFG  ++  E         V LKES  G+E  +   M+ET DY +PEPNTN +GG + SPPP
Subjt:  MGRSPFLSILLLSLLIAPCFTNGFGGKMRMMEGVDTHHGSSVELKES--GEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGCTCTCCTTTTCTCTCAATTCTTCTTCTTTCTCTCTTAATCGCACCCTGTTTCACTAATGGATTTGGAGGCAAAATGAGGATGATGGAGGGCGTTGATACACA
CCATGGCTCCAGTGTTGAATTAAAGGAAAGTGGAGAAGAAATGCGGAGGAGGATGATGATGATGGAGACGACGGATTATTCAGATCCAGAACCAAACACCAACGTAAAAG
GTGGCGGCTATGTTTCTCCACCTCCTCCCCTTCGTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATATATATATATATAATCTTGAACTCACATAAAACAAATCTGAATACGGCGATTGGGTTGGAGATATCTTCAAAAACCCCATTTTTATAGCCTTTCATCCCTCCTTGCAG
TTAAGTGGCAGCACTTACCTATTTTCTCTGCAACCAACAACGAAAGAGAGAACAAAAGCCCAGTTTTTGTCTTCTTTCTTCATTGATTCATTGATTCATTCATAAATTCG
TAAATCTAAAACCGACCCATCTCTCAAAATCCCCTTAATTCAAATGGGTCGCTCTCCTTTTCTCTCAATTCTTCTTCTTTCTCTCTTAATCGCACCCTGTTTCACTAATG
GATTTGGAGGCAAAATGAGGATGATGGAGGGCGTTGATACACACCATGGCTCCAGTGTTGAATTAAAGGAAAGTGGAGAAGAAATGCGGAGGAGGATGATGATGATGGAG
ACGACGGATTATTCAGATCCAGAACCAAACACCAACGTAAAAGGTGGCGGCTATGTTTCTCCACCTCCTCCCCTTCGTGGATGAACTTTTTGATTCTGTTTATGTTTTTG
TTTGGGGAAGTTGAGGAAAGAAAGCGGTTTCGTTGATATATGTTAAATTGCCTGGTTTTTGTTTTGTTTTTGTATATACAGTTTCGGTTGTGGTTTCGATGTGGGATTCA
GTAAATGATGCATTTTGTTGAAGTTTTTCTTTTTCTGTTCCTTATTGTAAATAATGGGAAGAAATTATCTTAATGAAAGTTTTATGCACGT
Protein sequenceShow/hide protein sequence
MGRSPFLSILLLSLLIAPCFTNGFGGKMRMMEGVDTHHGSSVELKESGEEMRRRMMMMETTDYSDPEPNTNVKGGGYVSPPPPLRG