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CmoCh11G010880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G010880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionBZIP transcription factor
Genome locationCmo_Chr11:6083881..6084520
RNA-Seq ExpressionCmoCh11G010880
SyntenyCmoCh11G010880
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588408.1 bZIP transcription factor 18, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2294.03Show/hide
Query:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQL----QQQHHVQQNGNGTTKPESNQ
        ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQL    QQQHHVQQNGNGTTKPESNQ
Subjt:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQL----QQQHHVQQNGNGTTKPESNQ

XP_008448029.1 PREDICTED: probable transcription factor PosF21 [Cucumis melo]1.3e-1782.09Show/hide
Query:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQLQQQH----HVQQNGNGTTKPESNQ
        ALNEALTAEVQRLKLATT+IN+QSHPSN VMAQ SMN HGLQLQQQH    H+QQNG+ TTKPESNQ
Subjt:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQLQQQH----HVQQNGNGTTKPESNQ

XP_022932214.1 uncharacterized protein LOC111438535 [Cucurbita moschata]2.4e-24100Show/hide
Query:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQLQQQHHVQQNGNGTTKPESNQ
        ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQLQQQHHVQQNGNGTTKPESNQ
Subjt:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQLQQQHHVQQNGNGTTKPESNQ

XP_023531256.1 uncharacterized protein LOC111793556 [Cucurbita pepo subsp. pepo]4.2e-2186.11Show/hide
Query:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQL---------QQQHHVQQNGNGTTKPESNQ
        ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMN HGLQL         QQQHHVQQNGNGTTKPESNQ
Subjt:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQL---------QQQHHVQQNGNGTTKPESNQ

XP_031744770.1 transcription factor VIP1 [Cucumis sativus]3.7e-1781.82Show/hide
Query:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQL---QQQHHVQQNGNGTTKPESNQ
        ALNEALTAEVQRLKLATT+IN+QSHPSN VMAQ SMNHHGLQL   QQQ H+QQNG+  TKPESNQ
Subjt:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQL---QQQHHVQQNGNGTTKPESNQ

TrEMBL top hitse value%identityAlignment
A0A0A0K0G6 BZIP domain-containing protein1.8e-1781.82Show/hide
Query:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQL---QQQHHVQQNGNGTTKPESNQ
        ALNEALTAEVQRLKLATT+IN+QSHPSN VMAQ SMNHHGLQL   QQQ H+QQNG+  TKPESNQ
Subjt:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQL---QQQHHVQQNGNGTTKPESNQ

A0A1S3BIS8 probable transcription factor PosF216.1e-1882.09Show/hide
Query:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQLQQQH----HVQQNGNGTTKPESNQ
        ALNEALTAEVQRLKLATT+IN+QSHPSN VMAQ SMN HGLQLQQQH    H+QQNG+ TTKPESNQ
Subjt:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQLQQQH----HVQQNGNGTTKPESNQ

A0A1S3BJD5 uncharacterized protein LOC1034903346.8e-1776.47Show/hide
Query:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQLQQQHH-----VQQNGNGTTKPESNQ
        ALNEALTAEVQRLKLATTE+N+QSHPSN VM+QP++NHH LQLQ QHH     +QQNG+ TTKPESNQ
Subjt:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQLQQQHH-----VQQNGNGTTKPESNQ

A0A6J1EWE2 uncharacterized protein LOC1114385351.2e-24100Show/hide
Query:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQLQQQHHVQQNGNGTTKPESNQ
        ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQLQQQHHVQQNGNGTTKPESNQ
Subjt:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQLQQQHHVQQNGNGTTKPESNQ

A0A6J1I3G1 uncharacterized protein LOC111469572 isoform X13.0e-1774.67Show/hide
Query:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQLQQQHHVQ------------QNGNGTTKPESNQ
        ALNEALTAEVQRLKLATTEIN+QSHPSN VMAQPSMNHHGLQLQQQ H Q            QNG+  TKPESNQ
Subjt:  ALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQLQQQHHVQ------------QNGNGTTKPESNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCCCAAAGAAAGCTACTCCCACTTCTTTTATCTCTGCTCAACCAGTGCTACTTTGCTTAGCAGTCCCGCTCTAAACGAAGCATTAACTGCGGAGGTTCAGCGATT
GAAGCTCGCTACGACTGAGATAAACTCGCAATCTCATCCCTCAAACAGGGTAATGGCTCAACCTTCAATGAATCACCATGGACTCCAGCTTCAGCAGCAGCATCATGTGC
AGCAGAATGGCAATGGAACCACAAAACCAGAGTCCAACCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACCCCAAAGAAAGCTACTCCCACTTCTTTTATCTCTGCTCAACCAGTGCTACTTTGCTTAGCAGTCCCGCTCTAAACGAAGCATTAACTGCGGAGGTTCAGCGATT
GAAGCTCGCTACGACTGAGATAAACTCGCAATCTCATCCCTCAAACAGGGTAATGGCTCAACCTTCAATGAATCACCATGGACTCCAGCTTCAGCAGCAGCATCATGTGC
AGCAGAATGGCAATGGAACCACAAAACCAGAGTCCAACCAATAA
Protein sequenceShow/hide protein sequence
MDPKESYSHFFYLCSTSATLLSSPALNEALTAEVQRLKLATTEINSQSHPSNRVMAQPSMNHHGLQLQQQHHVQQNGNGTTKPESNQ