CuGenDBv2

Gene ID	CmoCh11G011010
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Chloroplast envelope membrane protein
Genome location	Cmo_Chr11:6150202..6151092
RNA-Seq Expression	CmoCh11G011010
Synteny	CmoCh11G011010
Gene Ontology terms	GO:0009767 - photosynthetic electron transport chain (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0009521 - photosystem (cellular component) GO:0009706 - chloroplast inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function) GO:0016168 - chlorophyll binding (molecular function)
InterPro domains	IPR000932 - Photosystem antenna protein-like IPR004282 - Chloroplast envelope membrane protein, CemA IPR036001 - Photosystem antenna protein-like superfamily IPR044900 - Photosystem II CP43 reaction centre protein superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ALO22113.1 cemA [Cucurbita ficifolia]

1.8e-43

98.97

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Query:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        IFLNDIQEKSIIKKVRELEELFLLDEMLKEYP+THLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
Subjt:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

ALO22157.1 cemA [Cucurbita foetidissima]

1.2e-42

97.94

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Query:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        IFLNDIQEKSIIKKVRELEELFLLDEMLKEYP+THLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEEL ILNSWVQEFL
Subjt:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

QHB75975.1 envelope membrane protein [Cucumis melo subsp. melo]

1.6e-42

96.91

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Query:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        IFLNDIQEKSIIKKV ELEELFLLDEMLKEYP+THLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICF+ILSGYSILGNEELVILNSWVQEFL
Subjt:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

YP_009447462.1 envelope membrane protein [Cucurbita maxima]

1.8e-43

98.97

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Query:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        IFLNDIQEKSIIKKVRELEELFLLDEMLKEYP+THLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
Subjt:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

YP_009752002.1 envelope membrane carbon uptake protein [Cionosicys macranthus]

1.6e-42

97.94

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Query:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        IFLNDIQEKSIIKKV ELEELFLLDEMLKEYP+THLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
Subjt:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

TrEMBL top hits

e value

%identity

Alignment

A0A0S2IE38 Chloroplast envelope membrane protein

8.9e-44

98.97

Show/hide

Query:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        IFLNDIQEKSIIKKVRELEELFLLDEMLKEYP+THLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
Subjt:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

A0A0S2IFX5 Chloroplast envelope membrane protein

8.9e-44

98.97

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Query:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        IFLNDIQEKSIIKKVRELEELFLLDEMLKEYP+THLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
Subjt:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

A0A0S2IG02 Chloroplast envelope membrane protein

8.9e-44

98.97

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Query:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        IFLNDIQEKSIIKKVRELEELFLLDEMLKEYP+THLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
Subjt:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

A0A0S2IGS1 Chloroplast envelope membrane protein

8.9e-44

98.97

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Query:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        IFLNDIQEKSIIKKVRELEELFLLDEMLKEYP+THLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
Subjt:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

A0A2H4T1X7 envelope membrane protein, chloroplastic

8.9e-44

98.97

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Query:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        IFLNDIQEKSIIKKVRELEELFLLDEMLKEYP+THLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
Subjt:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

SwissProt top hits

e value

%identity

Alignment

A0ZZ47 Chloroplast envelope membrane protein

9.8e-40

84.38

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Query:  FLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        FLNDIQEKSI+++  E+EELFLLDEM+KEYP+THLQKLRIGI KETIQLIK+HNED IHTILHFSTN+ICF+ILSGYSILGNEEL+ILNSW QEFL
Subjt:  FLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

Q0ZJ08 Chloroplast envelope membrane protein

3.7e-39

84.38

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Query:  FLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        FLNDIQEKSI++K  ELEELFLLDEM+KE P+THLQKLR+GI+KETIQLIKM+NED IHTILHFSTNIICF+ILSGYSILGNEEL+ILNSW+Q+FL
Subjt:  FLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

Q2L922 Chloroplast envelope membrane protein

3.4e-40

85.42

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Query:  FLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        FLNDIQEKSI+++  E+EELFLLDEM+KEYP+THLQKLRIGI KETIQLIK+HNED IHTILHFSTN+ICF+ILSGYSILGNEEL+ILNSWVQEFL
Subjt:  FLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

Q2QD77 Chloroplast envelope membrane protein

2.5e-43

94.79

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Query:  FLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        FLNDIQEKSIIKKV ELEELFLLDEMLKEYP+THLQKLRI I KETIQLIKMHNEDRIHTILHFSTNIICF+ILSGYSILGNEELVILNSWVQEFL
Subjt:  FLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

Q71E53 Chloroplast envelope membrane protein

2.2e-39

86.6

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Query:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        I LN IQEKSI+KK  ELEELFLLDEM+KEYP+THL+KLRIGIY ETIQLIKMHNED I+TILHFSTNIICF+ILS YSILGNEELVILNSWVQEFL
Subjt:  IFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00280.1 photosystem II reaction center protein C

2.1e-29

98.28

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Query:  TFLVRDQRLGANIGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPN
        TFLVRDQRLGAN+GSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPN
Subjt:  TFLVRDQRLGANIGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPN

ATCG00530.1 CemA-like proton extrusion protein-related

1.1e-33

72.92

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Query:  FLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL
        FLNDIQEKS ++K  +LEELF LDEM+KEYP+T+LQ+ R+GI+KETIQ IK+HNE  IHTILHFSTN+I F+ILSGYS  G E+L ILNSWVQEFL
Subjt:  FLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQLIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFL

Sequences

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CDS sequence

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ATGATAGGACACAAGAAAATAAGTTTTATTAAGAATAATGGGACTCCAAAAATTAAGGGATATCCTTTCTTTTTAATTCTTAACAATTGGAGTCTCTTGTACTATCTTCT
TCTGAGACTCCTTTTGTTTGTTACATGCCTATTCCACCAATTAGTAACCCAAGATTCTAGGCTTTTATTTCTAATTTTTTTGAATGATATTCAAGAAAAGAGTATTATAA
AAAAAGTTAGAGAATTAGAGGAACTCTTTCTCTTGGACGAAATGTTAAAGGAATACCCAAAAACACATCTACAAAAGCTTCGTATCGGAATTTACAAAGAAACGATCCAA
TTGATCAAGATGCACAATGAGGACCGTATCCATACGATTTTGCACTTCTCGACAAATATAATCTGTTTCATTATTCTAAGTGGTTATTCTATTCTTGGTAATGAAGAGCT
TGTTATTCTTAACTCTTGGGTTCAAGAGTTCCTAACGTTTCTAGTTAGAGACCAACGTCTTGGAGCTAACATTGGATCCGCTCAAGGACCTACTGGTTTAGGTAAATATC
TAATGCGTTCTCCGACAGGAGAAGTCATTTTTGGGGGAGAGACTATGCGTTTTTGGGATCTGCGTGCTCCTTGGTTAGAACCACTAAGGGGTCCTAATGAGAACGTCATG
TTTCTCGCAAACCAAAAATTTCAACGAGTACCAAACAACAGTCTGCCAAAGGATTCTTGCTCTTATCTTAAAATGCGTGTTCAATATAACTTCATCGCTGAAAATAGTGC
AATAGAATTGGGAAGTATTCTACTTGACTGA

mRNA sequence

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Protein sequence

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MIGHKKISFIKNNGTPKIKGYPFFLILNNWSLLYYLLLRLLLFVTCLFHQLVTQDSRLLFLIFLNDIQEKSIIKKVRELEELFLLDEMLKEYPKTHLQKLRIGIYKETIQ
LIKMHNEDRIHTILHFSTNIICFIILSGYSILGNEELVILNSWVQEFLTFLVRDQRLGANIGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNENVM
FLANQKFQRVPNNSLPKDSCSYLKMRVQYNFIAENSAIELGSILLD

CmoCh11G011010 (gene) of Cucurbita moschata (Rifu) v1 genome