; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G011150 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G011150
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionchromatin remodeling protein SHL-like isoform X1
Genome locationCmo_Chr11:6247050..6251896
RNA-Seq ExpressionCmoCh11G011150
SyntenyCmoCh11G011150
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0035067 - negative regulation of histone acetylation (biological process)
GO:2000028 - regulation of photoperiodism, flowering (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003682 - chromatin binding (molecular function)
GO:0035064 - methylated histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001025 - Bromo adjacent homology (BAH) domain
IPR001965 - Zinc finger, PHD-type
IPR011011 - Zinc finger, FYVE/PHD-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR019786 - Zinc finger, PHD-type, conserved site
IPR019787 - Zinc finger, PHD-finger
IPR043151 - Bromo adjacent homology (BAH) domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022279.1 Chromatin remodeling protein SHL [Cucurbita argyrosperma subsp. argyrosperma]2.7e-11597.64Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSD----WFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQ
        CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSD     FHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQ
Subjt:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSD----WFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQ

Query:  NSQSTSKIAETK
        NSQSTSKIAETK
Subjt:  NSQSTSKIAETK

XP_022924958.1 chromatin remodeling protein SHL-like isoform X1 [Cucurbita moschata]2.0e-118100Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
        CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS

Query:  TSKIAETK
        TSKIAETK
Subjt:  TSKIAETK

XP_022971431.1 chromatin remodeling protein SHL isoform X1 [Cucurbita maxima]2.9e-11799.52Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKA RQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
        CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS

Query:  TSKIAETK
        TSKIAETK
Subjt:  TSKIAETK

XP_022971449.1 chromatin remodeling protein SHL isoform X3 [Cucurbita maxima]2.9e-11799.52Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKA RQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
        CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS

Query:  TSKIAETK
        TSKIAETK
Subjt:  TSKIAETK

XP_023529360.1 chromatin remodeling protein SHL-like isoform X3 [Cucurbita pepo subsp. pepo]2.0e-118100Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
        CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS

Query:  TSKIAETK
        TSKIAETK
Subjt:  TSKIAETK

TrEMBL top hitse value%identityAlignment
A0A0A0K4E7 Uncharacterized protein4.6e-11394.23Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
        CTVHTFKNYTKLDAVGN+DYF RFDYNS TGAF PDRVAVYCKCEMPYNPDDLMVQCE CSDWFHPACIEM+ E+AKKLDHF+CESCS EGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS

Query:  TSKIAETK
        TSK+AETK
Subjt:  TSKIAETK

A0A1S3BJS6 chromatin remodeling protein SHL-like6.0e-11394.23Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRG NVKVHVRWYYRPEESIGGRRQFHGSKELFLSDH+DVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
        CTVHTFKNYTKLDAVGN+DYF RFDYNS TGAF PDRVAVYCKCEMPYNPDDLMVQCE CSDWFHPACIEM+AE+AKKLDHF+CESCS EGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS

Query:  TSKIAETK
        TSK+AETK
Subjt:  TSKIAETK

A0A6J1EAH8 chromatin remodeling protein SHL-like isoform X19.6e-119100Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
        CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS

Query:  TSKIAETK
        TSKIAETK
Subjt:  TSKIAETK

A0A6J1I3B3 chromatin remodeling protein SHL isoform X11.4e-11799.52Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKA RQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
        CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS

Query:  TSKIAETK
        TSKIAETK
Subjt:  TSKIAETK

A0A6J1I8K6 chromatin remodeling protein SHL isoform X31.4e-11799.52Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        MAKPKA RQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
        CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
Subjt:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS

Query:  TSKIAETK
        TSKIAETK
Subjt:  TSKIAETK

SwissProt top hitse value%identityAlignment
F4JGB7 Chromatin remodeling protein At4g042607.2e-6361.5Show/hide
Query:  GDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNEDYFSRFD
        GDCVLMRPS+  K  YVA++EKIEAD+R  NVKVH RWYY PEES GGRRQ HG+KELFLSDH+DVQSA TIEGKC VHTFKNYT+L+ VG EDY+  FD
Subjt:  GDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNEDYFSRFD

Query:  YNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCS--PEGQKKLQNSQSTSKIAETKFSCSKAIGLSHTNEI
        Y +ATGAFTPDRVAVY KCEMPYN D+LM +   C    H AC+ ++ E+AKKL+HF C  CS   +G K+ QN  ++S   + K S  K I +  + E+
Subjt:  YNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCS--PEGQKKLQNSQSTSKIAETKFSCSKAIGLSHTNEI

F4JL28 Chromatin remodeling protein EBS1.1e-8469.34Show/hide
Query:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC
        +K K  R+ LDSYT+K  NK ++AGDCVLMRPS+  KP YVA++EKIEAD+R  NVKVH RWYYRPEES+GGRRQFHG+KELFLSDH+DVQSA TIEGKC
Subjt:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC

Query:  TVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQ-KKLQNSQS
         VHTFKNYT+L+ VG EDY+ RF+Y +ATGAFTPDRVAVYCKCEMPYNPDDLMVQCE C DW+HPAC+ M+ E+AKKLDHF C  CS +   KK QN  +
Subjt:  TVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQ-KKLQNSQS

Query:  TSKIAETKFSCS
        +S   + K   S
Subjt:  TSKIAETKFSCS

Q3UHR0 BAH and coiled-coil domain-containing protein 11.2e-0933.58Show/hide
Query:  VKRINKTIKAGDC-VLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKL--
        + R  +T++ GDC V +    P+ P Y+ +IE +  +S G+N+ V V+W+Y PEE+  G+RQ  G   L+ S H D     TI  KC V   + Y ++  
Subjt:  VKRINKTIKAGDC-VLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKL--

Query:  --DAVGNED-YFSRFDYNSATGAF-TPDRVAVYC
               +D Y+    Y+  TG   T D V V C
Subjt:  --DAVGNED-YFSRFDYNSATGAF-TPDRVAVYC

Q9FEN9 Chromatin remodeling protein SHL1.8e-8567.44Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        M K KAPR+ L SY +K INK+I+ GD VLMR SEP KPSYVA++E IE D+RG++ KV VRWYYRPEESIGGRRQFHG+KE+FLSDH+D QSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
        C VH+F +YTKLD+VGN+D+F RF+YNS TGAF PDRV V+CKCEMPYNPDDLMVQCE CS+WFHP+CI  + E+AKK D+F+CE CSP+ Q+ L NS S
Subjt:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS

Query:  TSKIAETKFSCSKAI
        TS   + K +  +++
Subjt:  TSKIAETKFSCSKAI

Q9P281 BAH and coiled-coil domain-containing protein 15.4e-1032.84Show/hide
Query:  VKRINKTIKAGDC-VLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKL--
        + R  +T++ GDC V +    P+ P Y+ +IE +  +S G+N+ V V+W+Y PEE+  G+RQ  G   L+ S H D     TI  KC V   + Y ++  
Subjt:  VKRINKTIKAGDC-VLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKL--

Query:  --DAVGNED-YFSRFDYNSATGAF-TPDRVAVYC
               +D Y+    Y+  TG   T D V + C
Subjt:  --DAVGNED-YFSRFDYNSATGAF-TPDRVAVYC

Arabidopsis top hitse value%identityAlignment
AT4G04260.1 Bromo-adjacent homology (BAH) domain-containing protein1.5e-6060.51Show/hide
Query:  MRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNEDYFSRFDYNSAT
        MRPS+  K  YVA++EKIEAD+R  NVKVH RWYY PEES GGRRQ HG+KELFLSDH+DVQSA TIEGKC VHTFKNYT+L+ VG EDY+  FDY +AT
Subjt:  MRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHTFKNYTKLDAVGNEDYFSRFDYNSAT

Query:  GAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCS--PEGQKKLQNSQSTSKIAETKFSCSKAIGLSHTNEI
        GAFTPDRVAVY KCEMPYN D+LM +   C    H AC+ ++ E+AKKL+HF C  CS   +G K+ QN  ++S   + K S  K I +  + E+
Subjt:  GAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCS--PEGQKKLQNSQSTSKIAETKFSCSKAIGLSHTNEI

AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein8.1e-8669.34Show/hide
Query:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC
        +K K  R+ LDSYT+K  NK ++AGDCVLMRPS+  KP YVA++EKIEAD+R  NVKVH RWYYRPEES+GGRRQFHG+KELFLSDH+DVQSA TIEGKC
Subjt:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC

Query:  TVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQ-KKLQNSQS
         VHTFKNYT+L+ VG EDY+ RF+Y +ATGAFTPDRVAVYCKCEMPYNPDDLMVQCE C DW+HPAC+ M+ E+AKKLDHF C  CS +   KK QN  +
Subjt:  TVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQ-KKLQNSQS

Query:  TSKIAETKFSCS
        +S   + K   S
Subjt:  TSKIAETKFSCS

AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein1.1e-8570.19Show/hide
Query:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC
        +K K  R+ LDSYT+K  NK ++AGDCVLMRPS+  KP YVA++EKIEAD+R  NVKVH RWYYRPEES+GGRRQFHG+KELFLSDH+DVQSA TIEGKC
Subjt:  AKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKC

Query:  TVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQ-KKLQNSQS
         VHTFKNYT+L+ VG EDY+ RF+Y +ATGAFTPDRVAVYCKCEMPYNPDDLMVQCE C DW+HPAC+ M+ E+AKKLDHF C  CS +   KK QN  +
Subjt:  TVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQ-KKLQNSQS

Query:  TSKIAETK
        +S   + K
Subjt:  TSKIAETK

AT4G39100.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein1.2e-8667.44Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        M K KAPR+ L SY +K INK+I+ GD VLMR SEP KPSYVA++E IE D+RG++ KV VRWYYRPEESIGGRRQFHG+KE+FLSDH+D QSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS
        C VH+F +YTKLD+VGN+D+F RF+YNS TGAF PDRV V+CKCEMPYNPDDLMVQCE CS+WFHP+CI  + E+AKK D+F+CE CSP+ Q+ L NS S
Subjt:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQS

Query:  TSKIAETKFSCSKAI
        TS   + K +  +++
Subjt:  TSKIAETKFSCSKAI

AT4G39100.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein1.0e-7274.23Show/hide
Query:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK
        M K KAPR+ L SY +K INK+I+ GD VLMR SEP KPSYVA++E IE D+RG++ KV VRWYYRPEESIGGRRQFHG+KE+FLSDH+D QSADTIEGK
Subjt:  MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGK

Query:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDW
        C VH+F +YTKLD+VGN+D+F RF+YNS TGAF PDRV V+CKCEMPYNPDDLMVQCE CS+W
Subjt:  CTVHTFKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAACCCAAGGCTCCGAGGCAAACCCTAGATTCCTACACTGTCAAACGCATCAACAAAACCATTAAAGCCGGCGACTGCGTGCTTATGAGGCCCTCTGAA
CCCTCGAAACCGTCGTATGTGGCCAAGATTGAGAAGATTGAGGCGGATTCTCGCGGGGCCAATGTGAAGGTCCATGTTCGCTGGTATTACCGGCCGGAGGAATCG
ATTGGGGGTCGGAGACAGTTTCATGGCTCGAAGGAGTTGTTTCTCTCCGACCATTACGACGTTCAAAGCGCAGATACCATCGAGGGAAAGTGTACGGTGCATACA
TTTAAGAATTATACCAAGCTTGATGCTGTTGGGAATGAGGACTATTTTTCCCGTTTCGACTATAATTCCGCTACTGGGGCTTTCACTCCCGATCGAGTGGCTGTA
TATTGCAAATGTGAGATGCCTTATAATCCCGATGACCTAATGGTTCAGTGCGAGAGATGCAGTGATTGGTTTCATCCTGCTTGTATAGAAATGTCTGCAGAAAAA
GCTAAAAAACTTGACCACTTCTTCTGTGAAAGTTGTTCTCCAGAGGGTCAAAAGAAGTTGCAGAATTCACAGTCTACATCTAAAATTGCAGAGACAAAGTTCAGT
TGCAGCAAGGCCATAGGCTTATCACACACTAATGAAATCAAAGTTTTTCACATTGAACTCATCTGA
mRNA sequenceShow/hide mRNA sequence
TGGAAGTAAAGTTTTGGCCTTGGCATATGCCGCCACGTGACCAGCAGATCCACTCCTCCGCCGGACATTTTCCTCAGCTGGACTCCGGCGATTCATTTTCCGGCC
AACTTCTCTCTTCTCCCACCTTTTCTCTCTTCCTTCCATTAATTCCGCTCCAACTTCTCTCCATTTCCTCCTCCAACTTCTAATTCCAGGGCTCGCTTTTGATGG
CCAAACCCAAGGCTCCGAGGCAAACCCTAGATTCCTACACTGTCAAACGCATCAACAAAACCATTAAAGCCGGCGACTGCGTGCTTATGAGGCCCTCTGAACCCT
CGAAACCGTCGTATGTGGCCAAGATTGAGAAGATTGAGGCGGATTCTCGCGGGGCCAATGTGAAGGTCCATGTTCGCTGGTATTACCGGCCGGAGGAATCGATTG
GGGGTCGGAGACAGTTTCATGGCTCGAAGGAGTTGTTTCTCTCCGACCATTACGACGTTCAAAGCGCAGATACCATCGAGGGAAAGTGTACGGTGCATACATTTA
AGAATTATACCAAGCTTGATGCTGTTGGGAATGAGGACTATTTTTCCCGTTTCGACTATAATTCCGCTACTGGGGCTTTCACTCCCGATCGAGTGGCTGTATATT
GCAAATGTGAGATGCCTTATAATCCCGATGACCTAATGGTTCAGTGCGAGAGATGCAGTGATTGGTTTCATCCTGCTTGTATAGAAATGTCTGCAGAAAAAGCTA
AAAAACTTGACCACTTCTTCTGTGAAAGTTGTTCTCCAGAGGGTCAAAAGAAGTTGCAGAATTCACAGTCTACATCTAAAATTGCAGAGACAAAGTTCAGTTGCA
GCAAGGCCATAGGCTTATCACACACTAATGAAATCAAAGTTTTTCACATTGAACTCATCTGA
Protein sequenceShow/hide protein sequence
MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVHVRWYYRPEESIGGRRQFHGSKELFLSDHYDVQSADTIEGKCTVHT
FKNYTKLDAVGNEDYFSRFDYNSATGAFTPDRVAVYCKCEMPYNPDDLMVQCERCSDWFHPACIEMSAEKAKKLDHFFCESCSPEGQKKLQNSQSTSKIAETKFS
CSKAIGLSHTNEIKVFHIELI