; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G011390 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G011390
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionReverse transcriptase
Genome locationCmo_Chr11:6426444..6428002
RNA-Seq ExpressionCmoCh11G011390
SyntenyCmoCh11G011390
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PIN22518.1 DNA-directed DNA polymerase [Handroanthus impetiginosus]1.6e-19171.56Show/hide
Query:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY
        M EVV+KEI+KWLDAGIIYPI+++SWVSP+QCVP KGGITV+ N +NELIPTR V GWR+CMDYR+LNKATRKDHFPLPFIDQMLDRLAGK  YCFLDGY
Subjt:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY

Query:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM
        SGYNQI I+PEDQEKTTFTCPYG F FRRMPFGLCNAPA FQRCMM +FTDMVE  +E+F DDFSVYG+SF+ CL NL  VL+RCE+ NLVLNW+K HFM
Subjt:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM

Query:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW
        V E IV GHK+S RGIEVD+AK+ETIE+L PPTSVKG+RSFL HAGFYR+FIKDFSKI+K LC+LLE +  F FD  C+ AF  LK  L + PI++ PDW
Subjt:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW

Query:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ
        + PFELMCDAS  A+GA+LGQ+K K+   IYYASKTLN+AQ+NYTTTEKELLAVVFA +KFR+ L G KV VYTDHAAI++L+ K +AKP LIRW+LLLQ
Subjt:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ

Query:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSS
        EF++EI D KG  N +ADHLSR+E+  +   S  I+D FP+EQLL I +S
Subjt:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSS

XP_023520803.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784278 [Cucurbita pepo subsp. pepo]2.4e-20880.78Show/hide
Query:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY
        M EVVRK+ILKWLDA IIYPIAN+SWVS IQCVP KGGI VM ++NNELI TRIVN WRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY
Subjt:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY

Query:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM
        SGYNQITISPEDQEKTTFTCPYGIFVFRRMPF LCNAPA FQRCMM +FTDMVETFMEIF +DFSVYGESFETCLCNLGKV QR                
Subjt:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM

Query:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW
                          DRAKIE IERLNPPTSVKGIRSFL H GFYR+FIKDFSKIAK LCSLLESNRKF FDKQCMT FQ LKT LTT PIMSTPDW
Subjt:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW

Query:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ
        NL FELMC ASGHAVG MLGQKKGK+LHPIYYA+KTLNEAQVNYTTTEKEL AVVFAVEKFRA LFG KVKVYTDH AIKHLMMK NAKP LIRWILL+Q
Subjt:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ

Query:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSSSSNYSSSRMTATP
        EFEIEIVD KG NNHVADHLSRMENME KVNSKEIDDAF + QLL I       SSSRMTATP
Subjt:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSSSSNYSSSRMTATP

XP_023521407.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo]7.2e-24591.36Show/hide
Query:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY
        M EVVRKEILKWLDAGIIYPIAN+S VSPIQCVP KGGITVMAN+NNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY
Subjt:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY

Query:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM
        SGYNQITISPEDQEKTTFTCPYGIF FRRMPFGLCNAPA FQRCMM +FTDMVETFMEIF DDFSVYGESFETCLCNLGKVLQRCEEKNLVLNW+K HFM
Subjt:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM

Query:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW
        VNE IV GHKISRRGIEVDRAKIE IERLNPPTSVKGIRSFL HAGFYR+FIKDFSKIAK LCSLLESNRKFVFDKQCMTAFQ LKT LTT PIMSTPDW
Subjt:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW

Query:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ
        N PFELMCDASGHAVGAMLGQKKGK+LHPIYYASKTLN AQVNYTTTEKELLAVVFAVEKFRA LFG KVKVYTDHAAIKHLMMK NAKP LIRWILLLQ
Subjt:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ

Query:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSSSSNYSSSRMTATP
        EFEIEIVD KG NN+V DHLSRMENMEEKVNSKEIDDAFP+EQLL IN      SSSRMTATP
Subjt:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSSSSNYSSSRMTATP

XP_023521781.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785639, partial [Cucurbita pepo subsp. pepo]2.1e-22892.29Show/hide
Query:  KGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLC
        KGGITVMAN+NNELI TRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTCPY IF FRRMPFGLC
Subjt:  KGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLC

Query:  NAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSV
        NAPA FQRCMM +FTDMVETFMEIF DDFSVYGESFETCLCNLGKVLQRCEEKNLVLNW+K HFMVNE IV GHKISRRGIEVDRAKIE IERLNPPTSV
Subjt:  NAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDRAKIETIERLNPPTSV

Query:  KGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDWNLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASK
        KGIRSFL HAGFYR+FIKDFSKIAK LCSLLESNRKFVFDKQCMTAFQ LKT LTT PIMSTPDWN PFELMCDASGHAVGAMLGQKKGK+LHPIYYASK
Subjt:  KGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDWNLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASK

Query:  TLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEI
        TLN AQVNYTTTEKELLAVVFAVEKFRA LFG KVKVYTDHAAIKHLMMK NAKP LIRWILLLQEFEIEIVD KG NNHVADHLS MENMEEKVNSKEI
Subjt:  TLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEI

Query:  DDAFPNEQLLWINSSSSNYSSSRMTATP
        DDAFP+EQLL INS+SS+YSSSRMTATP
Subjt:  DDAFPNEQLLWINSSSSNYSSSRMTATP

XP_023522102.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111785979 [Cucurbita pepo subsp. pepo]1.0e-24391.14Show/hide
Query:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY
        M EVVRKEILKWLDAGIIYPIAN+S VSPIQCVP KGGITVMAN+NNELI TRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY
Subjt:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY

Query:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM
        SGYNQITISPEDQEKTTFTCPYGIF FRRMPFGLCNAPA FQRCMM +FTDMVETFMEIF DDFSVYGESFETCLCNLGKVLQRCEEKNLVLNW+K HFM
Subjt:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM

Query:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW
        VNE IV GHKISRRGIEVDRAKIE IERLNPPTSVKGIRSFL HAGFYR+FIKDFSKIAK LCSLLESNRKFVFDKQCMTAFQ LKT LTT PIMSTPDW
Subjt:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW

Query:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ
        N PFELMCDASGHAVGAMLGQKKGK+LHPIYYASKTLNEAQVNYTTTEKELL VVFAVEKFRA LFG KVKVYTDHAAIKHLMMK NAKP LIRWILLLQ
Subjt:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ

Query:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSSSSNYSSSRMTATP
        EFEIEIVD KG NNHVADHLSRMENMEEKVNSKEIDDAF +EQLL IN      SSSRM ATP
Subjt:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSSSSNYSSSRMTATP

TrEMBL top hitse value%identityAlignment
A0A2G9FWY3 Reverse transcriptase3.9e-18870.89Show/hide
Query:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY
        M EVV+KEI+KWLDAGIIYPI+++SWVSP+QCVP KGGITV+ N +NELIPTR V GWR+CMDYR+LNKATRKDHFPL FIDQMLDRLAGK  YCFLDGY
Subjt:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY

Query:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM
        SGYNQI I+PEDQEK TFTCPYG F FRRMPFGLCNAPA FQRCMM +FTDMVE  +E+F DDFSVYG SF+ CL NL  VL+RCE+ NL+LNW+K HFM
Subjt:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM

Query:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW
        V E IV GHK+S RGIEVD+AK+ETIE+L PPTSVKG+RSFL HAGFYR+FIKDFSKI+K LC+LLE +  F FD  C  AF  LK  L + PI++ PDW
Subjt:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW

Query:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ
        + PFELMCDAS  AVGA+LGQ+K K+   IYYASKTLN+AQ+NYTTTEKELLAVVFA +KFR+ L G KV VYTDHAAI++L+ K +AKP LIRW+LLLQ
Subjt:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ

Query:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSS
        EF++EI D KG  N +ADHLSR+E+  +      I+D FP+EQLL I +S
Subjt:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSS

A0A2G9HWF8 Reverse transcriptase5.7e-18769.78Show/hide
Query:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY
        M EVV+KEI+KWLDAGIIYPI++ SW+SP+QCVP KGGITV+ N +NE IPT+ V GWR+CMDYR+LNKATRKDHFPLPFIDQMLDRLAGK  YCFLDGY
Subjt:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY

Query:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM
        SGYNQI I+PEDQEKTTFTCPYG F FRR+PF LCNAPA FQRCMM +FTDMVE  +E+F DDFSVYG+SF+ CL NL  VL+RCE+ NLVLNW+K HFM
Subjt:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM

Query:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW
        V E IV GHK+S RGIEVD+AK+ETIE+L P TSVKG+RSFL HAGFYR+FIKDF KI+K LC LLE +  F FD  C+ AF  LK  L + PI++ PDW
Subjt:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW

Query:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ
        + PFELMCDAS  A+GA+LGQ+K K+   IYYASKTLN+AQ+NYTTTEKELLAVVFA +KFR+ L G KV VYTDHAAI++L+ K +AKP LIRW+LLLQ
Subjt:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ

Query:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSS
        EF++EI D KG+ N +ADHLSR+E+  +      I+D FP+EQLL I +S
Subjt:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSS

A0A2G9HYA0 Reverse transcriptase3.8e-19171.56Show/hide
Query:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY
        M EVV+KEI+KWLDAGIIYPI+++SWVSP+QCVP KGGITV+ N +NELIPTR V GWR+CMDYR+LNKATRKDHFPLPFIDQMLDRLAGK  YCFLDGY
Subjt:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY

Query:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM
        SGYNQI I+PEDQEKTTFTCPYG F FRRMPFGLCNAPA FQRCMM +FTDMVE  +E+F DDFSVYG+SF+ CL NL  VL+RCE+ NL+LNW+K HFM
Subjt:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM

Query:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW
        V E IV GHK+S RGIEVD+AK+ETIE+L PPTSVKG+RSFL HAGFYR+FIKDFSKI+K LC+LLE +  F FD  C+ AF  LK  L + PI++ PDW
Subjt:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW

Query:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ
        + PFELMCDAS  AVGA+LGQ+K K+   IYYASKTLN+AQ+NYTTTEKELLAVVFA +KFR+ L G KV VYTDHAAI++L+ K +AKP LIRW+LLLQ
Subjt:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ

Query:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSS
        EF++EI D KG  N +ADHLSR+E+  +   S  I+D FP+EQLL I +S
Subjt:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSS

A0A2G9HYD8 Reverse transcriptase7.6e-19271.56Show/hide
Query:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY
        M EVV+KEI+KWLDAGIIYPI+++SWVSP+QCVP KGGITV+ N +NELIPTR V GWR+CMDYR+LNKATRKDHFPLPFIDQMLDRLAGK  YCFLDGY
Subjt:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY

Query:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM
        SGYNQI I+PEDQEKTTFTCPYG F FRRMPFGLCNAPA FQRCMM +FTDMVE  +E+F DDFSVYG+SF+ CL NL  VL+RCE+ NLVLNW+K HFM
Subjt:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM

Query:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW
        V E IV GHK+S RGIEVD+AK+ETIE+L PPTSVKG+RSFL HAGFYR+FIKDFSKI+K LC+LLE +  F FD  C+ AF  LK  L + PI++ PDW
Subjt:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW

Query:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ
        + PFELMCDAS  A+GA+LGQ+K K+   IYYASKTLN+AQ+NYTTTEKELLAVVFA +KFR+ L G KV VYTDHAAI++L+ K +AKP LIRW+LLLQ
Subjt:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ

Query:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSS
        EF++EI D KG  N +ADHLSR+E+  +   S  I+D FP+EQLL I +S
Subjt:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWINSS

A0A6P6GDJ4 Reverse transcriptase1.1e-18569.2Show/hide
Query:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY
        + +VV  EILK LDAGIIYPI++++WVSPIQ VP KGG+TV  N  +ELIPTR+V GWR+C+DYR+LNKATRKDHFPLPFIDQML+RLAGK +YCFLDGY
Subjt:  MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGY

Query:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM
        SGYNQI I+P+DQEKTTFTCPYG F +RRMPFGLCNAPA FQRCMM++F+DMVE  +EIF DDFSV+G+SF +CL NL +VL RC+E NLVLNW+K HFM
Subjt:  SGYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFM

Query:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW
        V E IV GHK+S+RGIEVD+AKIE IE+L PPTS+KGIRSFL HAGFYR+FIKDFSKI K LC+LL  +  FVFD +CM AF  LK  L   PIM TP+W
Subjt:  VNERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDW

Query:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ
        NLPFE+MCDAS +A+GA+LGQ+K K LH IYYAS+TLN+AQ+NY TTEKE+LA+VFA +KFRA L G K  VYTDH+AIK+LM K  +KP LIRW+LLLQ
Subjt:  NLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQ

Query:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWIN
        EF++EI+D KGV N VADHLSR+E  EEK   ++I++ FP+E++  ++
Subjt:  EFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFPNEQLLWIN

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.9e-6735.4Show/hide
Query:  VRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYN
        V  +I   L+ GII   +N+ + SPI  VP K   +                 +RI +DYR+LN+ T  D  P+P +D++L +L   +++  +D   G++
Subjt:  VRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYN

Query:  QITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFMVNER
        QI + PE   KT F+  +G + + RMPFGL NAPA FQRCM  +   ++     ++ DD  V+  S +  L +LG V ++  + NL L   K  F+  E 
Subjt:  QITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFMVNER

Query:  IVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKF-VFDKQCMTAFQTLKTVLTTVPIMSTPDWNLP
           GH ++  GI+ +  KIE I++   PT  K I++FL   G+YRKFI +F+ IAK +   L+ N K    + +  +AF+ LK +++  PI+  PD+   
Subjt:  IVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKF-VFDKQCMTAFQTLKTVLTTVPIMSTPDWNLP

Query:  FELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFE
        F L  DAS  A+GA+L Q      HP+ Y S+TLNE ++NY+T EKELLA+V+A + FR  L G   ++ +DH  +  L    +    L RW + L EF+
Subjt:  FELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFE

Query:  IEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAF--PNEQLLWINSSSSN
         +I   KG  N VAD LSR++ +EE   S++   +    N  L++I     N
Subjt:  IEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAF--PNEQLLWINSSSSN

P10394 Retrovirus-related Pol polyprotein from transposon 4126.7e-6032.94Show/hide
Query:  MEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYS
        +E ++ ++ K +   I+ P + + + SP+  VP K              P      WR+ +DYR++NK    D FPLP ID +LD+L    ++  LD  S
Subjt:  MEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYS

Query:  GYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFMV
        G++QI +    ++ T+F+   G + F R+PFGL  AP  FQR M   F+ +  +   ++ DD  V G S +  L NL +V  +C E NL L+ +K  F +
Subjt:  GYNQITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFMV

Query:  NERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDWN
        +E    GHK + +GI  D  K + I+    P      R F++   +YR+FIK+F+  ++ +  L + N  F +  +C  AF  LK+ L    ++  PD++
Subjt:  NERIVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDWN

Query:  LPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQE
          F +  DAS  A GA+L Q       P+ YAS+   + + N +TTE+EL A+ +A+  FR  ++G+   V TDH  + +L    N    L R  L L+E
Subjt:  LPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQE

Query:  FEIEIVDPKGVNNHVADHLSRMENMEEK
        +   +   KG +NHVAD LSR+   E K
Subjt:  FEIEIVDPKGVNNHVADHLSRMENMEEK

P20825 Retrovirus-related Pol polyprotein from transposon 2974.6e-6132.89Show/hide
Query:  VRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYN
        V  ++ + L+ G+I   +N+ + SP   VP K   +               N +R+ +DYR+LN+ T  D +P+P +D++L +L    ++  +D   G++
Subjt:  VRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYN

Query:  QITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFMVNER
        QI +  E   KT F+   G + + RMPFGL NAPA FQRCM  +   ++     ++ DD  ++  S    L ++  V  +  + NL L   K  F+  E 
Subjt:  QITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFMVNER

Query:  IVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDK-QCMTAFQTLKTVLTTVPIMSTPDWNLP
           GH ++  GI+ +  K++ I     PT  K IR+FL   G+YRKFI +++ IAK + S L+   K    K + + AF+ LK ++   PI+  PD+   
Subjt:  IVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDK-QCMTAFQTLKTVLTTVPIMSTPDWNLP

Query:  FELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFE
        F L  DAS  A+GA+L Q      HPI + S+TLN+ ++NY+  EKELLA+V+A + FR  L G +  + +DH  ++ L         L RW + L E++
Subjt:  FELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFE

Query:  IEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAF--PNEQLLWINSSSSNY
         +I   KG  N VAD LSR++ +EE  +S+    +    N  L+ +     NY
Subjt:  IEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAF--PNEQLLWINSSSSNY

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein1.2e-5333.26Show/hide
Query:  VRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYN
        + K + K LD   I P + +   SP+  VP K G                   +R+C+DYR LNKAT  D FPLP ID +L R+     +  LD +SGY+
Subjt:  VRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYN

Query:  QITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFMVNER
        QI + P+D+ KT F  P G + +  MPFGL NAP+ F R M   F D+   F+ ++ DD  ++ ES E    +L  VL+R + +NL++  KK  F   E 
Subjt:  QITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFMVNER

Query:  IVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMT-----AFQTLKTVLTTVPIMSTPD
           G+ I  + I   + K   I     P +VK  + FL    +YR+FI + SKIA+ +       + F+ DK   T     A + LK  L   P++   +
Subjt:  IVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMT-----AFQTLKTVLTTVPIMSTPD

Query:  WNLPFELMCDASGHAVGAMLGQ--KKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWIL
            + L  DAS   +GA+L +   K KL+  + Y SK+L  AQ NY   E ELL ++ A+  FR  L G+   + TDH ++  L  K+     + RW+ 
Subjt:  WNLPFELMCDASGHAVGAMLGQ--KKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWIL

Query:  LLQEFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEID
         L  ++  +    G  N VAD +SR         S+ ID
Subjt:  LLQEFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEID

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus1.2e-6434.12Show/hide
Query:  VRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYN
        V ++I + L  GII P +N+ + SPI  VP K         N E         +R+ +D++RLN  T  D +P+P I+  L  L    ++  LD  SG++
Subjt:  VRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYN

Query:  QITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFMVNER
        QI +   D  KT F+   G + F R+PFGL NAPA FQR +  +  + +     ++ DD  V+ E ++T   NL  VL    + NL +N +K HF+  + 
Subjt:  QITISPEDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFMVNER

Query:  IVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSL---LESNRK--------FVFDKQCMTAFQTLKTVLTTVP
           G+ ++  GI+ D  K+  I  + PPTSVK ++ FL    +YRKFI+D++K+AK L +L   L +N K           D+  + +F  LK++L +  
Subjt:  IVSGHKISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSL---LESNRK--------FVFDKQCMTAFQTLKTVLTTVP

Query:  IMSTPDWNLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGE-KVKVYTDHAAIKHLMMKSNAKPIL
        I++ P +  PF L  DAS  A+GA+L Q       PI Y S++LN+ + NY T EKE+LA++++++  RA L+G   +KVYTDH  +   +   N    L
Subjt:  IMSTPDWNLPFELMCDASGHAVGAMLGQKKGKLLHPIYYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGE-KVKVYTDHAAIKHLMMKSNAKPIL

Query:  IRWILLLQEFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEID-DAFPNEQLLWI-NSSSSNYSSSRM
         RW   ++E+  E++   G +N VAD LSR   +  ++N    D DA P + +  +  + S+ + SSR+
Subjt:  IRWILLLQEFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEID-DAFPNEQLLWI-NSSSSNYSSSRM

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein6.7e-1535.38Show/hide
Query:  NLGKVLQRCEEKNLVLNWKKYHFMVNERIVSGHK--ISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVF
        +LG VLQ  E+     N KK  F   +    GH+  IS  G+  D AK+E +     P +   +R FL   G+YR+F+K++ KI + L  LL+ N    +
Subjt:  NLGKVLQRCEEKNLVLNWKKYHFMVNERIVSGHK--ISRRGIEVDRAKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVF

Query:  DKQCMTAFQTLKTVLTTVPIMSTPDWNLPF
         +    AF+ LK  +TT+P+++ PD  LPF
Subjt:  DKQCMTAFQTLKTVLTTVPIMSTPDWNLPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGGTTGTTAGAAAGGAGATTCTCAAATGGCTAGATGCTGGAATAATTTATCCAATTGCAAACAACAGCTGGGTCAGTCCTATTCAATGTGTTCCTAATAAAGG
AGGGATAACAGTAATGGCAAATAAGAACAATGAGTTGATCCCCACTAGAATAGTGAATGGATGGAGAATTTGCATGGATTATAGAAGGCTAAACAAAGCGACACGTAAGG
ATCATTTTCCCTTACCATTCATTGATCAAATGCTTGATAGGCTTGCCGGAAAGTCACATTATTGCTTCTTGGATGGTTATTCGGGATACAATCAAATTACAATCAGTCCA
GAAGATCAAGAGAAAACTACATTCACATGCCCATATGGAATTTTTGTCTTTAGACGAATGCCCTTTGGACTATGTAATGCTCCAGCAAAATTTCAACGTTGCATGATGAC
CATGTTTACAGATATGGTAGAAACATTTATGGAGATATTCACGGATGATTTTTCGGTTTATGGAGAATCTTTTGAGACTTGTTTGTGCAATTTAGGGAAGGTTCTACAAA
GATGTGAAGAGAAGAATCTTGTACTGAATTGGAAAAAATATCATTTTATGGTCAATGAGAGAATAGTGTCAGGCCACAAGATCTCAAGAAGAGGAATAGAAGTTGATAGA
GCCAAGATAGAAACTATTGAAAGATTGAATCCACCTACGTCAGTTAAAGGTATAAGAAGCTTTTTGAGCCATGCAGGGTTTTATAGGAAGTTTATTAAAGATTTCTCCAA
GATTGCAAAACTATTGTGTAGTTTGTTGGAGTCAAATAGAAAATTCGTTTTTGACAAACAATGCATGACTGCCTTCCAAACATTAAAGACAGTGCTGACCACAGTTCCTA
TAATGTCAACACCCGATTGGAATTTACCATTTGAGTTGATGTGTGATGCTAGTGGCCATGCTGTGGGGGCAATGTTAGGACAGAAAAAGGGGAAGCTACTTCATCCTATC
TATTATGCCAGCAAAACGTTGAATGAGGCTCAAGTGAATTATACAACCACTGAAAAAGAATTGTTGGCCGTAGTATTCGCTGTTGAAAAGTTCAGAGCTTCTTTATTTGG
AGAGAAGGTGAAAGTGTACACTGACCACGCAGCAATCAAGCACCTAATGATGAAATCGAATGCCAAGCCAATATTAATTAGATGGATTCTATTGTTACAAGAGTTCGAGA
TAGAAATCGTGGACCCGAAAGGAGTTAATAACCATGTAGCGGATCACTTATCTAGAATGGAGAACATGGAAGAAAAGGTCAATAGCAAAGAAATTGATGATGCATTTCCG
AATGAACAGTTGCTTTGGATAAACAGCAGTAGCAGCAACTACAGCAGTAGCAGAATGACAGCAACTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGAGGTTGTTAGAAAGGAGATTCTCAAATGGCTAGATGCTGGAATAATTTATCCAATTGCAAACAACAGCTGGGTCAGTCCTATTCAATGTGTTCCTAATAAAGG
AGGGATAACAGTAATGGCAAATAAGAACAATGAGTTGATCCCCACTAGAATAGTGAATGGATGGAGAATTTGCATGGATTATAGAAGGCTAAACAAAGCGACACGTAAGG
ATCATTTTCCCTTACCATTCATTGATCAAATGCTTGATAGGCTTGCCGGAAAGTCACATTATTGCTTCTTGGATGGTTATTCGGGATACAATCAAATTACAATCAGTCCA
GAAGATCAAGAGAAAACTACATTCACATGCCCATATGGAATTTTTGTCTTTAGACGAATGCCCTTTGGACTATGTAATGCTCCAGCAAAATTTCAACGTTGCATGATGAC
CATGTTTACAGATATGGTAGAAACATTTATGGAGATATTCACGGATGATTTTTCGGTTTATGGAGAATCTTTTGAGACTTGTTTGTGCAATTTAGGGAAGGTTCTACAAA
GATGTGAAGAGAAGAATCTTGTACTGAATTGGAAAAAATATCATTTTATGGTCAATGAGAGAATAGTGTCAGGCCACAAGATCTCAAGAAGAGGAATAGAAGTTGATAGA
GCCAAGATAGAAACTATTGAAAGATTGAATCCACCTACGTCAGTTAAAGGTATAAGAAGCTTTTTGAGCCATGCAGGGTTTTATAGGAAGTTTATTAAAGATTTCTCCAA
GATTGCAAAACTATTGTGTAGTTTGTTGGAGTCAAATAGAAAATTCGTTTTTGACAAACAATGCATGACTGCCTTCCAAACATTAAAGACAGTGCTGACCACAGTTCCTA
TAATGTCAACACCCGATTGGAATTTACCATTTGAGTTGATGTGTGATGCTAGTGGCCATGCTGTGGGGGCAATGTTAGGACAGAAAAAGGGGAAGCTACTTCATCCTATC
TATTATGCCAGCAAAACGTTGAATGAGGCTCAAGTGAATTATACAACCACTGAAAAAGAATTGTTGGCCGTAGTATTCGCTGTTGAAAAGTTCAGAGCTTCTTTATTTGG
AGAGAAGGTGAAAGTGTACACTGACCACGCAGCAATCAAGCACCTAATGATGAAATCGAATGCCAAGCCAATATTAATTAGATGGATTCTATTGTTACAAGAGTTCGAGA
TAGAAATCGTGGACCCGAAAGGAGTTAATAACCATGTAGCGGATCACTTATCTAGAATGGAGAACATGGAAGAAAAGGTCAATAGCAAAGAAATTGATGATGCATTTCCG
AATGAACAGTTGCTTTGGATAAACAGCAGTAGCAGCAACTACAGCAGTAGCAGAATGACAGCAACTCCATGACAGTGA
Protein sequenceShow/hide protein sequence
MMEVVRKEILKWLDAGIIYPIANNSWVSPIQCVPNKGGITVMANKNNELIPTRIVNGWRICMDYRRLNKATRKDHFPLPFIDQMLDRLAGKSHYCFLDGYSGYNQITISP
EDQEKTTFTCPYGIFVFRRMPFGLCNAPAKFQRCMMTMFTDMVETFMEIFTDDFSVYGESFETCLCNLGKVLQRCEEKNLVLNWKKYHFMVNERIVSGHKISRRGIEVDR
AKIETIERLNPPTSVKGIRSFLSHAGFYRKFIKDFSKIAKLLCSLLESNRKFVFDKQCMTAFQTLKTVLTTVPIMSTPDWNLPFELMCDASGHAVGAMLGQKKGKLLHPI
YYASKTLNEAQVNYTTTEKELLAVVFAVEKFRASLFGEKVKVYTDHAAIKHLMMKSNAKPILIRWILLLQEFEIEIVDPKGVNNHVADHLSRMENMEEKVNSKEIDDAFP
NEQLLWINSSSSNYSSSRMTATP