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CmoCh11G011920 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G011920
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr11:6965092..6972378
RNA-Seq ExpressionCmoCh11G011920
SyntenyCmoCh11G011920
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588495.1 hypothetical protein SDJN03_17060, partial [Cucurbita argyrosperma subsp. sororia]9.0e-3497.53Show/hide
Query:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSSISRGDALTISNSDAKR
        MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDG VSSISRGDAL ISNSDAKR
Subjt:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSSISRGDALTISNSDAKR
KAG7022324.1 hypothetical protein SDJN02_16055 [Cucurbita argyrosperma subsp. argyrosperma]2.6e-3397.5Show/hide
Query:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSSISRGDALTISNSDAK
        MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDG VSSISRGDAL ISNSDAK
Subjt:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSSISRGDALTISNSDAK
XP_022934797.1 uncharacterized protein LOC111441864 [Cucurbita moschata]2.9e-2481.25Show/hide
Query:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSSISRGDALTISNSDAK
        MDPKHTGE+LKHL+KQDELLMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGR S     +AL  S +D+K
Subjt:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSSISRGDALTISNSDAK
XP_022983888.1 uncharacterized protein LOC111482368 [Cucurbita maxima]6.5e-2480Show/hide
Query:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSSISRGDALTISNSDAK
        MDPKHTGE+LKHL+KQDELLMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDG  S     +AL  S +D+K
Subjt:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSSISRGDALTISNSDAK
XP_023527243.1 uncharacterized protein LOC111790538 [Cucurbita pepo subsp. pepo]2.9e-2495.16Show/hide
Query:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGR
        MDPKHTGE+LKHL+KQDELLMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGR
Subjt:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGR
TrEMBL top hitse value%identityAlignment
A0A0A0LF72 Uncharacterized protein3.8e-2287.69Show/hide
Query:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSS
        MDPKHTGEILKHL+KQ E LMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGL KK+ED R SS
Subjt:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSS
A0A1S3B7U3 uncharacterized protein LOC103486972 isoform X21.9e-2186.15Show/hide
Query:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSS
        MDPKHT EILKHL+KQDE LMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGL KK+E+ R SS
Subjt:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSS
A0A6J1F3T3 uncharacterized protein LOC1114418641.4e-2481.25Show/hide
Query:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSSISRGDALTISNSDAK
        MDPKHTGE+LKHL+KQDELLMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGR S     +AL  S +D+K
Subjt:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSSISRGDALTISNSDAK
A0A6J1J8Z6 uncharacterized protein LOC1114823683.1e-2480Show/hide
Query:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSSISRGDALTISNSDAK
        MDPKHTGE+LKHL+KQDELLMDAYR MSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDG  S     +AL  S +D+K
Subjt:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSSISRGDALTISNSDAK
A0A7J7CQH9 Uncharacterized protein7.2e-2182.81Show/hide
Query:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVS
        MDP+HTGEILKHLDKQ+EL+ DAY+ MSHELHKLQVEEEMLMRKFYE+M+AHGLTKKS D  VS
Subjt:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23040.1 unknown protein3.6e-0464.52Show/hide
Query:  MSHELHKLQVEEEMLMRKFYEIMSAHGLTKK
        M+ EL  L+VEEEM+MRKFYE+MS   L KK
Subjt:  MSHELHKLQVEEEMLMRKFYEIMSAHGLTKK
AT4G37608.1 unknown protein2.1e-1256.14Show/hide
Query:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKK
        M+P+HT ++LKHL+KQ ELL +A + M  EL KL+VE E +MRK YE+M+ H L KK
Subjt:  MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCCAAACACACGGGAGAGATTTTGAAGCATTTGGACAAGCAGGATGAGCTTCTTATGGATGCTTATAGATTAATGTCCCATGAATTACATAAACTTCAGGTAGA
AGAAGAAATGCTCATGCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAACAAAGAAGAGTGAAGATGGTCGTGTTAGTTCTATTAGCAGAGGAGATGCGTTAACTA
TATCTAATAGTGACGCTAAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
GAAATTGAAGACGGAAACTGAGGGCCCATCCTCTTCTCTCACCCCACCTGTGATCTCACCTCTCCCTTTCTTTGCTCCTCTGTCGTTGCTCTCATTCTTGCCGTCACCGT
CTCCGTCGCCGTCGCCGTCGCCTGCTGAGATATTTGAGAAGCAAACCTGTTGACAGGCGACATTTTGGAACGTGGTGAAGTCTAAAGCTCTTGGAATGGATCCCAAACAC
ACGGGAGAGATTTTGAAGCATTTGGACAAGCAGGATGAGCTTCTTATGGATGCTTATAGATTAATGTCCCATGAATTACATAAACTTCAGGTAGAAGAAGAAATGCTCAT
GCGCAAGTTTTATGAAATAATGTCAGCTCATGGTCTAACAAAGAAGAGTGAAGATGGTCGTGTTAGTTCTATTAGCAGAGGAGATGCGTTAACTATATCTAATAGTGACG
CTAAAAGGTAAAATTACCACGACCTCTCAACTCACTGTGAAAGGAAAGTCTCAATGTGACTCGCACGTATGTAATTTTTCTCTTCATAGTATAAACTAAAATTTTGATCA
TATGTAATTACAATTACATAAGCTTTTGATTT
Protein sequenceShow/hide protein sequence
MDPKHTGEILKHLDKQDELLMDAYRLMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRVSSISRGDALTISNSDAKR