; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G012070 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G012070
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRibosome assembly factor mrt4
Genome locationCmo_Chr11:7135203..7139252
RNA-Seq ExpressionCmoCh11G012070
SyntenyCmoCh11G012070
Gene Ontology termsGO:0000027 - ribosomal large subunit assembly (biological process)
GO:0000956 - nuclear-transcribed mRNA catabolic process (biological process)
GO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
InterPro domainsIPR001790 - Ribosomal protein L10P
IPR033867 - Ribosome assembly factor Mrt4
IPR040637 - 60S ribosomal protein L10P, insertion domain
IPR043141 - Ribosomal protein L10-like domain superfamily
IPR043164 - 50S ribosomal protein L10, insertion domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157470.1 mRNA turnover protein 4 homolog [Momordica charantia]8.8e-10888.21Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKS+SR          VSLGRT SDEI+PGL+K+SKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEY DYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRKLG+PVRLNKGVVELVSDF VCEEGK+LSPESAGILRALGIRMA+
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFELYIDGPDNSDIETA
        FRLNLVCRWSPG+F+LYI+G DNSD+E+A
Subjt:  FRLNLVCRWSPGEFELYIDGPDNSDIETA

XP_022933518.1 mRNA turnover protein 4 homolog [Cucurbita moschata]1.1e-11595.63Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR          VSLGRTASDEIQPGLYKVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFELYIDGPDNSDIETA
        FRLNLVCRWSPGEFELYIDGPDNSDIETA
Subjt:  FRLNLVCRWSPGEFELYIDGPDNSDIETA

XP_022969955.1 mRNA turnover protein 4 homolog [Cucurbita maxima]9.7e-11595.2Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR          VSLGRTASDEIQPGLYKVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFELYIDGPDNSDIETA
        FRLNLVCRWSPGEFELYIDGPD SDIETA
Subjt:  FRLNLVCRWSPGEFELYIDGPDNSDIETA

XP_023529350.1 mRNA turnover protein 4 homolog [Cucurbita pepo subsp. pepo]3.3e-11595.2Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR          VSLGRTAS+EIQPGLYKVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFELYIDGPDNSDIETA
        FRLNLVCRWSPGEFELYIDGPDNSDIETA
Subjt:  FRLNLVCRWSPGEFELYIDGPDNSDIETA

XP_038902849.1 mRNA turnover protein 4 homolog [Benincasa hispida]7.2e-11090.39Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMV+LIRQAVENYNSI+VFTVENMRNLKFKELREQLKSSSR          VSLGR+AS+EI+PGL+KVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFELYIDGPDNSDIETA
        FRL+LVCRWSPG+FELYIDGPDNSD+E+A
Subjt:  FRLNLVCRWSPGEFELYIDGPDNSDIETA

TrEMBL top hitse value%identityAlignment
A0A0A0LM77 Ribosome assembly factor mrt42.3e-9384.54Show/hide
Query:  MVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRQV-----------VSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYVD
        MV+LIRQAVENYNS++VFTVENMRNLKFKELREQLKS+SRQV           +SLGR+ SDEI+PGL+KVSKLLHGNTGLCFTNLPKEEVERLFNEY D
Subjt:  MVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRQV-----------VSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEYVD

Query:  YDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPD
        YDYARTGS A+EKVELKEGPL QFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEGKSLSPESAGILRALG+R A FRLNLVCRWSPG+FELYIDGP+
Subjt:  YDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPD

Query:  NSDIETA
        NSD+E+A
Subjt:  NSDIETA

A0A6J1DT71 Ribosome assembly factor mrt44.3e-10888.21Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKS+SR          VSLGRT SDEI+PGL+K+SKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEY DYDYARTGS ATEKVELKEGPLEQFSHEMEPSLRKLG+PVRLNKGVVELVSDF VCEEGK+LSPESAGILRALGIRMA+
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFELYIDGPDNSDIETA
        FRLNLVCRWSPG+F+LYI+G DNSD+E+A
Subjt:  FRLNLVCRWSPGEFELYIDGPDNSDIETA

A0A6J1F4Z2 Ribosome assembly factor mrt45.6e-11695.63Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR          VSLGRTASDEIQPGLYKVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFELYIDGPDNSDIETA
        FRLNLVCRWSPGEFELYIDGPDNSDIETA
Subjt:  FRLNLVCRWSPGEFELYIDGPDNSDIETA

A0A6J1I1E2 Ribosome assembly factor mrt44.7e-11595.2Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR          VSLGRTASDEIQPGLYKVSKLLHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT
        TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFELYIDGPDNSDIETA
        FRLNLVCRWSPGEFELYIDGPD SDIETA
Subjt:  FRLNLVCRWSPGEFELYIDGPDNSDIETA

A0A6P5T8Z8 Ribosome assembly factor mrt47.3e-9275.55Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHK+++V+ IRQA E+Y+S+YVF+ ENMRNLKFKE R+QLKSSSR          +SLGR+ SDEI+P L+K+SK+LHGN
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR--------QVVSLGRTASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT
         GLCFTNLPKEEVERLFNEY +YD+ARTGS ATEKVEL+EGPLEQF+HEMEP LRK G+PVRLNKGVVELVSDF VC+EGKSLSPESA ILR LGI+MAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFELYIDGPDNSDIETA
        FRL+L+ RWSPGEFELY  GPD+S +E++
Subjt:  FRLNLVCRWSPGEFELYIDGPDNSDIETA

SwissProt top hitse value%identityAlignment
A4FV84 mRNA turnover protein 4 homolog8.7e-5048.56Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR-------QVVSLGRTASDEIQPGLYKVSKLLHGNT
        MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y  +++F+V NMRN K K++R   K S          +V+LGR+ SDE +  L++VSK L G  
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR-------QVVSLGRTASDEIQPGLYKVSKLLHGNT

Query:  GLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATF
        GL FTN  KEEV+  F +Y + DYAR G++AT  V L  GPLEQF H MEP LR+LGLP  L KGVV L+SD+ VC+EG  L+PE A +L+  G  MA F
Subjt:  GLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATF

Query:  RLNLVCRW
        ++++   W
Subjt:  RLNLVCRW

Q7S302 Ribosome assembly factor mrt45.3e-3134.33Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLK-------SSSRQVVSLGRTASDEIQPGLYKVSKLLHGNT
        MPKSKR +   L++  KK RE K+ + + IR+ + NY   +VF+++NMRN   K++R++L         +     +LG T  D    GL K+SK L G+ 
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLK-------SSSRQVVSLGRTASDEIQPGLYKVSKLLHGNT

Query:  GLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQ------------FSHEMEPSLRKLGLPVRLNKGVVEL------VSDFTVCEEGKSL
        GL FTN    E++  F      D+AR GS AT  + +  GPL               SH +EP LR+LG+P R+ KG V L        D+ +C+EG++L
Subjt:  GLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQ------------FSHEMEPSLRKLGLPVRLNKGVVEL------VSDFTVCEEGKSL

Query:  SPESAGILRALGIRMATFRLNLVCRWSPGEFEL
              +L+   I ++ FR+ L+  WS    E+
Subjt:  SPESAGILRALGIRMATFRLNLVCRWSPGEFEL

Q86HD3 Ribosome assembly factor mrt42.1e-3537.67Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSS-----SRQVVS--LGRTASDEIQPGLYKVSKLLHGNT
        M KSKR+  V ++K  K   E KK +V  I+  V+ Y  IY+FT ENMRN K K +R +  +S       +V+S  LG++  DE++P L+K+++ L G  
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSS-----SRQVVS--LGRTASDEIQPGLYKVSKLLHGNT

Query:  GLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATF
        GL FTN PK++V   F  Y + D+ R+G  + E + +KEGP+   +H ME  LR LGLP  L  GV+ +  ++T+CE G +++PE + +L+     ++ F
Subjt:  GLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATF

Query:  RLNLVCRWSPGEFEL
        + ++   W+  EF L
Subjt:  RLNLVCRWSPGEFEL

Q9D0I8 mRNA turnover protein 4 homolog2.8e-4848.08Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR-------QVVSLGRTASDEIQPGLYKVSKLLHGNT
        MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y  +++F+V NMRN K K++R   K S          +V+LGR+ SDE +  L++VSK L G  
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR-------QVVSLGRTASDEIQPGLYKVSKLLHGNT

Query:  GLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATF
        GL FTN  KEEV   F +Y + D+AR G++AT  V L  GPL+QF H MEP LR+LGLP  L KGVV L+SD+ VC+EG  L+PE A IL+  G  MA F
Subjt:  GLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATF

Query:  RLNLVCRW
        ++ +   W
Subjt:  RLNLVCRW

Q9UKD2 mRNA turnover protein 4 homolog1.6e-4847.6Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR-------QVVSLGRTASDEIQPGLYKVSKLLHGNT
        MPKSKRD+ V+L+KT KKG E K+++++ +R+ V+ Y  +++F+V NMRN K K++R   K S          +V+LGR+ SDE +  L++VSK L G  
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSR-------QVVSLGRTASDEIQPGLYKVSKLLHGNT

Query:  GLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATF
        GL FTN  KEEV   F +Y + DYAR G++A   V L  GPLEQF H MEP LR+LGLP  L +GVV L+SD+ VC+EG  L+PE A +L+  G  MA F
Subjt:  GLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATF

Query:  RLNLVCRW
        ++ +   W
Subjt:  RLNLVCRW

Arabidopsis top hitse value%identityAlignment
AT1G25260.1 Ribosomal protein L10 family protein7.5e-8165.53Show/hide
Query:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQ--------LKSSSRQVVSLGRTASDEIQPGLYKVSKLLHGN
        MPKSKRDRPVTLSKTKKKGREHK+ +V+ IR+AVE Y+S+YVF+ ENMRN+KFKE R+Q        L S+    V+LGR+A DE++ G+YKVSKLL G+
Subjt:  MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQ--------LKSSSRQVVSLGRTASDEIQPGLYKVSKLLHGN

Query:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT
        TGL  T++PKEEVE LFN Y D D++RTGS A E VELKEGPLEQF+HEMEP LRKL +PVRLNKG VELV+DF VCEEGK LSP+SA ILR L ++MAT
Subjt:  TGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMAT

Query:  FRLNLVCRWSPGEFELYIDG------PDNSDIETA
        F+LNL+CRWSP +FELY +        D SD+ET+
Subjt:  FRLNLVCRWSPGEFELYIDG------PDNSDIETA

AT3G09200.1 Ribosomal protein L10 family protein1.7e-0825.26Show/hide
Query:  KKGREHKKSMVDL-IRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRQVVSLGRT----------ASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEV
        K  +  KK   D  + Q ++ Y  I V   +N+ + + + +R+ L+  S  VV +G+           + +     +  +  LL GN GL FT    +EV
Subjt:  KKGREHKKSMVDL-IRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRQVVSLGRT----------ASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEV

Query:  ERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATFRL
             +Y     AR G  A   V ++ G     +  ++PS     + L +P ++NKG VE+++   + ++G  +    A +L  LGIR  ++ L
Subjt:  ERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATFRL

AT3G09200.2 Ribosomal protein L10 family protein2.1e-0630.36Show/hide
Query:  LLHGNTGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGIL
        LL GN GL FT    +EV     +Y     AR G  A   V ++ G     +  ++PS     + L +P ++NKG VE+++   + ++G  +    A +L
Subjt:  LLHGNTGLCFTNLPKEEVERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGIL

Query:  RALGIRMATFRL
          LGIR  ++ L
Subjt:  RALGIRMATFRL

AT3G11250.1 Ribosomal protein L10 family protein1.3e-0825.26Show/hide
Query:  KKGREHKKSMVDL-IRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRQVVSLGRT----------ASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEV
        K  +  KK   D  + Q ++ Y  I V   +N+ + + + +R+ L+  S  VV +G+           + +     +  +  LL GN GL FT    +EV
Subjt:  KKGREHKKSMVDL-IRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRQVVSLGRT----------ASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEV

Query:  ERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATFRL
             +Y     AR G  A   V ++ G     +  ++PS     + L +P ++NKG VE+++   + ++G  +    A +L  LGIR  ++ L
Subjt:  ERLFNEYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPS----LRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATFRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAAGTCGAAGCGTGATAGACCAGTTACTTTATCAAAAACCAAGAAGAAAGGAAGGGAACATAAGAAATCAATGGTGGATCTAATCAGGCAGGCTGTGGAAAATTA
CAACTCAATTTATGTTTTCACTGTTGAGAACATGAGAAACCTCAAGTTCAAGGAACTCAGGGAGCAACTAAAGTCGTCTAGCAGGCAAGTTGTTTCTCTTGGTCGAACTG
CTTCCGATGAGATTCAACCAGGCCTATACAAGGTTTCTAAGCTTCTGCATGGCAATACTGGACTTTGTTTCACAAACTTACCGAAAGAAGAGGTTGAGAGATTATTTAAC
GAGTATGTGGATTATGATTATGCAAGGACTGGAAGTGAAGCCACAGAAAAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTCAGCCATGAAATGGAGCCTTCTCTACG
GAAGCTAGGATTGCCCGTTCGCTTGAACAAGGGTGTGGTGGAGCTTGTATCGGACTTTACTGTATGTGAGGAGGGCAAGTCTCTTTCACCAGAGTCAGCTGGCATACTGC
GTGCCTTGGGGATAAGGATGGCAACTTTTCGCCTGAATTTGGTATGCCGGTGGAGTCCTGGTGAGTTCGAACTTTACATTGATGGACCAGATAATTCTGACATTGAAACT
GCCTAG
mRNA sequenceShow/hide mRNA sequence
CTAAAACCTTCTTTACGCCCTCACCCAGCCGCATCACTCACTTTTATCGCCGCTTCCTTCTACGCCCGGTACCGAAGTTATTTGCAGCGATCAAAGATGCCCAAGTCGAA
GCGTGATAGACCAGTTACTTTATCAAAAACCAAGAAGAAAGGAAGGGAACATAAGAAATCAATGGTGGATCTAATCAGGCAGGCTGTGGAAAATTACAACTCAATTTATG
TTTTCACTGTTGAGAACATGAGAAACCTCAAGTTCAAGGAACTCAGGGAGCAACTAAAGTCGTCTAGCAGGCAAGTTGTTTCTCTTGGTCGAACTGCTTCCGATGAGATT
CAACCAGGCCTATACAAGGTTTCTAAGCTTCTGCATGGCAATACTGGACTTTGTTTCACAAACTTACCGAAAGAAGAGGTTGAGAGATTATTTAACGAGTATGTGGATTA
TGATTATGCAAGGACTGGAAGTGAAGCCACAGAAAAGGTTGAGCTTAAGGAAGGTCCTCTGGAGCAGTTCAGCCATGAAATGGAGCCTTCTCTACGGAAGCTAGGATTGC
CCGTTCGCTTGAACAAGGGTGTGGTGGAGCTTGTATCGGACTTTACTGTATGTGAGGAGGGCAAGTCTCTTTCACCAGAGTCAGCTGGCATACTGCGTGCCTTGGGGATA
AGGATGGCAACTTTTCGCCTGAATTTGGTATGCCGGTGGAGTCCTGGTGAGTTCGAACTTTACATTGATGGACCAGATAATTCTGACATTGAAACTGCCTAGAAGAACCC
CCAACACAATATTTTCCGATTAGAATTATATATATATGGGATGGATGGATGAATGAATGCATGAATGAATGACACTCTCCCCCTAGGATTAGATGCTATAATTTGAATGG
GATCGGACTTCTCTCTTTTTTGTATTTTTTTTCTTCTTTCTTTTGTGTAAATTATTCAACAAATTTTGAAGGGTATGTGCCCAAATCTTGTTTTGTTGTCTCTAGTGAGG
ATGAACGGATGTTACTGTGACTGGTTGGTAGATTTTGATTTGTATTATTGTCAGATCGTTGGTCTTTAAATTCTTCAAATATAGTATAGTATATTATTTTATGAAATTCT
GTATGTGTTATAAGCGCCAGGATCCATTAGAACTGGATCTTCCATTCTGAATTAATAATCTATCGTGTGTACCGATCTTCGTC
Protein sequenceShow/hide protein sequence
MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQLKSSSRQVVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFN
EYVDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEGKSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIET
A