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CmoCh11G012160 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G012160
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPhotosystem II CP43 reaction center protein
Genome locationCmo_Chr11:7313678..7314895
RNA-Seq ExpressionCmoCh11G012160
SyntenyCmoCh11G012160
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009521 - photosystem (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR036001 - Photosystem antenna protein-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
A4QJB1 Photosystem II CP43 reaction center protein3.8e-0483.33Show/hide
Query:  MNLFEVAHFVPEKPIYEQRSIFLP
        MNLFEVAHFVPEKP+YEQ  I LP
Subjt:  MNLFEVAHFVPEKPIYEQRSIFLP
A4QJJ5 Photosystem II CP43 reaction center protein3.8e-0483.33Show/hide
Query:  MNLFEVAHFVPEKPIYEQRSIFLP
        MNLFEVAHFVPEKP+YEQ  I LP
Subjt:  MNLFEVAHFVPEKPIYEQRSIFLP
A9LYI1 Photosystem II CP43 reaction center protein3.8e-0483.33Show/hide
Query:  MNLFEVAHFVPEKPIYEQRSIFLP
        MNLFEVAHFVPEKP+YEQ  I LP
Subjt:  MNLFEVAHFVPEKPIYEQRSIFLP
Q3V538 Photosystem II CP43 reaction center protein3.8e-0483.33Show/hide
Query:  MNLFEVAHFVPEKPIYEQRSIFLP
        MNLFEVAHFVPEKP+YEQ  I LP
Subjt:  MNLFEVAHFVPEKPIYEQRSIFLP
Q8HB52 Photosystem II CP43 reaction center protein3.8e-0483.33Show/hide
Query:  MNLFEVAHFVPEKPIYEQRSIFLP
        MNLFEVAHFVPEKP+YEQ  I LP
Subjt:  MNLFEVAHFVPEKPIYEQRSIFLP
Arabidopsis top hitse value%identityAlignment
ATCG00280.1 photosystem II reaction center protein C2.7e-0583.33Show/hide
Query:  MNLFEVAHFVPEKPIYEQRSIFLP
        MNLFEVAHFVPEKP+YEQ  I LP
Subjt:  MNLFEVAHFVPEKPIYEQRSIFLP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCTATTCGAAGTGGCTCATTTCGTACCTGAGAAGCCCATCTATGAACAAAGATCCATTTTCCTTCCCCGCCCGCCTAGCTACTACTCTAGGTTAGGGCGT
AGGCACTGGTGGGTCATTTATGGCATGCAGGAAGGGCTCGGGCAGCTGCCGCAGGATTTGAAAAAGGAATTAATCGACCTCTTCATGACTCCTCTTAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCTATTCGAAGTGGCTCATTTCGTACCTGAGAAGCCCATCTATGAACAAAGATCCATTTTCCTTCCCCGCCCGCCTAGCTACTACTCTAGGTTAGGGCGT
AGGCACTGGTGGGTCATTTATGGCATGCAGGAAGGGCTCGGGCAGCTGCCGCAGGATTTGAAAAAGGAATTAATCGACCTCTTCATGACTCCTCTTAACTGA
Protein sequenceShow/hide protein sequence
MNLFEVAHFVPEKPIYEQRSIFLPRPPSYYSRLGRRHWWVIYGMQEGLGQLPQDLKKELIDLFMTPLN