; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G012400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G012400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description26S proteasome regulatory subunit 6A homolog
Genome locationCmo_Chr11:7746188..7748240
RNA-Seq ExpressionCmoCh11G012400
SyntenyCmoCh11G012400
Gene Ontology termsGO:0030163 - protein catabolic process (biological process)
GO:0000502 - proteasome complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0140657 - ATP-dependent activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8706440.1 26S protease regulatory subunit 6A-like protein [Hibiscus syriacus]9.6e-2047.37Show/hide
Query:  EQDQLASFTTDRIIRAPRLLENEIRIFK--------------------------------------ILEMNPEDEAEEMVQIL----------ILTHKEI
        E+DQLAS TTD I+RA RLL+NEIRI K                                      ILEMNPEDEAEE    +          ++     
Subjt:  EQDQLASFTTDRIIRAPRLLENEIRIFK--------------------------------------ILEMNPEDEAEEMVQIL----------ILTHKEI

Query:  ENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK
          TIFLPVVG+VD +KLKPGDLV    +SYLILDTLPS YDSRV+AM+VDEK
Subjt:  ENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK

XP_022746762.1 26S proteasome regulatory subunit 6A homolog isoform X2 [Durio zibethinus]4.4e-2563.16Show/hide
Query:  EQDQLASFTTDRIIRAPRLLENEIRIFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPS
        E+DQL S TTD IIRA RLL+NEIRI KILEMNPEDEAEE    +          ++       TIFLPVVG+VD +KLKPGDLV    +SYLILDTLPS
Subjt:  EQDQLASFTTDRIIRAPRLLENEIRIFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPS

Query:  GYDSRVEAMDVDEK
         YDSRV+AM+VDEK
Subjt:  GYDSRVEAMDVDEK

XP_038716469.1 26S proteasome regulatory subunit 6A homolog B [Tripterygium wilfordii]1.3e-1947.06Show/hide
Query:  EQDQLASFTTDRIIRAPRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQIL----------ILTHKE
        E+DQLAS TTD I+RA RLL+NEIRI K                                       ILEMNPEDEAEE    +          ++    
Subjt:  EQDQLASFTTDRIIRAPRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQIL----------ILTHKE

Query:  IENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK
           TIFLPVVG+VD +KLKPGDLV    +SYLILDTLPS YDSRV+AM+VDEK
Subjt:  IENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK

XP_038880104.1 26S proteasome regulatory subunit 6A homolog [Benincasa hispida]4.3e-2048.05Show/hide
Query:  LEQDQLASFTTDRIIRAPRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQIL----------ILTHK
        LE+DQLAS TTD IIRA RLL+NEIRI K                                       ILEMNPEDEAEE    +          ++   
Subjt:  LEQDQLASFTTDRIIRAPRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQIL----------ILTHK

Query:  EIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK
            TIFLPVVG+VD +KLKPGDLV    +SYLILDTLPS YDSRV+AM+VDEK
Subjt:  EIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK

XP_038977280.1 26S proteasome regulatory subunit 6A homolog A-like [Phoenix dactylifera]4.3e-2059.65Show/hide
Query:  EQDQLASFTTDRIIRAPRLLENEIRIFKILEMNPEDEAEE---MVQI-------LILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPS
        E D+LAS TTD I RA RLL+NEIR   IL+MNPED  EE    V I        ++       TIFLPVVG+VD +KLKPGDLV    +SYLILDTLPS
Subjt:  EQDQLASFTTDRIIRAPRLLENEIRIFKILEMNPEDEAEE---MVQI-------LILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPS

Query:  GYDSRVEAMDVDEK
         YDSRV+AM+VDEK
Subjt:  GYDSRVEAMDVDEK

TrEMBL top hitse value%identityAlignment
A0A0D2U0A9 AAA domain-containing protein1.0e-1958.65Show/hide
Query:  EQDQLASFTTDRIIRAPRLLENEIRIFKILEMNPEDEAEEMVQILILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMD
        E+DQLAS TT+ I+RA RLL+NEIRI K    N + +++   + ++L       TIFLPVVG+VD +KLKPGDLV    +SYLILDTLPS YDSRV+AM+
Subjt:  EQDQLASFTTDRIIRAPRLLENEIRIFKILEMNPEDEAEEMVQILILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMD

Query:  VDEK
        VDEK
Subjt:  VDEK

A0A1U8LXQ3 26S protease regulatory subunit 6A homolog1.8e-1946.41Show/hide
Query:  EQDQLASFTTDRIIRAPRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQIL----------ILTHKE
        E+DQLAS TT+ I+RA RLL+NEIRI K                                       ILEMNPEDEAEE    +          ++    
Subjt:  EQDQLASFTTDRIIRAPRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQIL----------ILTHKE

Query:  IENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK
           TIFLPVVG+VD +KLKPGDLV    +SYLILDTLPS YDSRV+AM+VDEK
Subjt:  IENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK

A0A2H5PYL7 AAA domain-containing protein1.8e-1946.1Show/hide
Query:  LEQDQLASFTTDRIIRAPRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQIL----------ILTHK
        +E DQL+S TTD IIRA RLL+NEIR+ K                                       ILEMNPEDEAEE    +          ++   
Subjt:  LEQDQLASFTTDRIIRAPRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQIL----------ILTHK

Query:  EIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK
            TIFLPVVG+VD +KLKPGDLV    +SYLILDTLPS YDSRV+AM+VDEK
Subjt:  EIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK

A0A6P5Z2C2 26S proteasome regulatory subunit 6A homolog isoform X22.1e-2563.16Show/hide
Query:  EQDQLASFTTDRIIRAPRLLENEIRIFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPS
        E+DQL S TTD IIRA RLL+NEIRI KILEMNPEDEAEE    +          ++       TIFLPVVG+VD +KLKPGDLV    +SYLILDTLPS
Subjt:  EQDQLASFTTDRIIRAPRLLENEIRIFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPS

Query:  GYDSRVEAMDVDEK
         YDSRV+AM+VDEK
Subjt:  GYDSRVEAMDVDEK

V7BIW3 AAA domain-containing protein1.3e-1946.15Show/hide
Query:  AILEQDQLASFTTDRIIRAPRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQIL----------ILT
        A  E DQLA+ TTD I+RA RLL+NEIRI K                                       ILEMNPEDEAEE    +          ++ 
Subjt:  AILEQDQLASFTTDRIIRAPRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQIL----------ILT

Query:  HKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK
              TIFLPVVG+VD +KLKPGDLV    +SYLILDTLPS YDSRV+AM+VDEK
Subjt:  HKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK

SwissProt top hitse value%identityAlignment
O04019 26S proteasome regulatory subunit 6A homolog B2.5e-1555.06Show/hide
Query:  IFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK
        I +ILEM+PED+AEE    +          ++       TIFLPVVG+VD + LKPGDLV    +SYLILDTLPS YDSRV+AM+VDEK
Subjt:  IFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK

O23894 26S proteasome regulatory subunit 6A homolog5.1e-1656.18Show/hide
Query:  IFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK
        I +ILEMNPED+AEE    +          ++       TIFLPVVG+VD + LKPGDLV    +SYLILDTLPS YDSRV+AM+VDEK
Subjt:  IFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK

P46465 26S proteasome regulatory subunit 6A homolog4.5e-2043.14Show/hide
Query:  EQDQLASFTTDRIIRAPRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQIL----------ILTHKE
        + DQLAS +T+ I+RA RLL+NE R+ K                                       ILEMNPEDEAEE    +          ++    
Subjt:  EQDQLASFTTDRIIRAPRLLENEIRIFK---------------------------------------ILEMNPEDEAEEMVQIL----------ILTHKE

Query:  IENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK
           TIFLPV+G+VD  KLKPGDLV    +SYLILDTLPS YDSRV+AM+VDEK
Subjt:  IENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK

P54776 26S proteasome regulatory subunit 6A homolog6.7e-1656.18Show/hide
Query:  IFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK
        I +ILEMNPE+EAEE    +          ++       TIFLPVVG+VD + LKPGDLV    +SYLILDTLPS YDSRV+AM+VDEK
Subjt:  IFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK

Q9SEI2 26S proteasome regulatory subunit 6A homolog A5.1e-1656.18Show/hide
Query:  IFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK
        I +ILEMNPED+AEE    +          ++       TIFLPVVG+VD + LKPGDLV    +SYLILDTLPS YDSRV+AM+VDEK
Subjt:  IFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK

Arabidopsis top hitse value%identityAlignment
AT1G09100.1 26S proteasome AAA-ATPase subunit RPT5B1.8e-1655.06Show/hide
Query:  IFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK
        I +ILEM+PED+AEE    +          ++       TIFLPVVG+VD + LKPGDLV    +SYLILDTLPS YDSRV+AM+VDEK
Subjt:  IFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK

AT3G05530.1 regulatory particle triple-A ATPase 5A3.6e-1756.18Show/hide
Query:  IFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK
        I +ILEMNPED+AEE    +          ++       TIFLPVVG+VD + LKPGDLV    +SYLILDTLPS YDSRV+AM+VDEK
Subjt:  IFKILEMNPEDEAEEMVQIL----------ILTHKEIENTIFLPVVGIVDSNKLKPGDLV----ESYLILDTLPSGYDSRVEAMDVDEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATCCTCGAACAAGACCAGTTGGCTTCATTCACCACAGATCGCATCATTCGAGCTCCTCGTCTTCTAGAAAACGAGATTCGGATCTTCAAGATTCTGGAAATGAA
CCCAGAAGATGAAGCTGAAGAGATGGTGCAAATATTGATCTTGACTCACAAAGAAATCGAAAATACAATCTTTTTACCTGTTGTTGGGATTGTTGATTCCAACAAATTAA
AACCTGGTGATTTAGTTGAGAGTTACCTGATCTTGGACACTCTACCATCTGGGTACGATTCTAGAGTCGAGGCAATGGACGTTGATGAAAAGCATTAG
mRNA sequenceShow/hide mRNA sequence
AACTCATTTATCCCTCTCTGAAGATCGGTTGATGAAATTTTCGCCTTCAGTTTTTGTGAGCTCAGGCGATTCCACTCGAAATGGCGATCCTCGAACAAGACCAGTTGGCT
TCATTCACCACAGATCGCATCATTCGAGCTCCTCGTCTTCTAGAAAACGAGATTCGGATCTTCAAGATTCTGGAAATGAACCCAGAAGATGAAGCTGAAGAGATGGTGCA
AATATTGATCTTGACTCACAAAGAAATCGAAAATACAATCTTTTTACCTGTTGTTGGGATTGTTGATTCCAACAAATTAAAACCTGGTGATTTAGTTGAGAGTTACCTGA
TCTTGGACACTCTACCATCTGGGTACGATTCTAGAGTCGAGGCAATGGACGTTGATGAAAAGCATTAGAGGGTTGGAGAAGCAGGCAAGTCTCTAGCTTTCTCTAGGCAT
GCCTTATATGAACAATGAACATGCATTTGTTTTCGTCACATAATTGAGCATGTATCTACCCATTTATCATACAATTCCACACATTCTTTTTACGCATAACTTTCATTTTA
GACCATAAAATTCAATTTTAGTGATTAGAAGGTTGAATGTATAACTTCAAGCGTG
Protein sequenceShow/hide protein sequence
MAILEQDQLASFTTDRIIRAPRLLENEIRIFKILEMNPEDEAEEMVQILILTHKEIENTIFLPVVGIVDSNKLKPGDLVESYLILDTLPSGYDSRVEAMDVDEKH