; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G012560 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G012560
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionFlap endonuclease 1
Genome locationCmo_Chr11:8010662..8012380
RNA-Seq ExpressionCmoCh11G012560
SyntenyCmoCh11G012560
Gene Ontology termsGO:0006284 - base-excision repair (biological process)
GO:0043137 - DNA replication, removal of RNA primer (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0008409 - 5'-3' exonuclease activity (molecular function)
GO:0017108 - 5'-flap endonuclease activity (molecular function)
InterPro domainsIPR006084 - XPG/Rad2 endonuclease
IPR006085 - XPG, N-terminal
IPR006086 - XPG-I domain
IPR019974 - XPG conserved site
IPR029060 - PIN-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588523.1 Flap endonuclease 1, partial [Cucurbita argyrosperma subsp. sororia]2.0e-89100Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
        RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK

XP_022931724.1 flap endonuclease 1 isoform X1 [Cucurbita moschata]2.0e-89100Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
        RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK

XP_022969705.1 flap endonuclease 1 isoform X1 [Cucurbita maxima]2.0e-89100Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
        RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK

XP_023531871.1 flap endonuclease 1 isoform X1 [Cucurbita pepo subsp. pepo]2.0e-89100Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
        RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK

XP_023531872.1 flap endonuclease 1 isoform X2 [Cucurbita pepo subsp. pepo]2.0e-89100Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
        RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK

TrEMBL top hitse value%identityAlignment
A0A5D3CFP9 Flap endonuclease 11.1e-8898.26Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAPKGMKEQKFE+YFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAG+KPVYVFDGKPPDLKKQELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
        RYSKRADAT DLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK

A0A6J1EUG5 Flap endonuclease 19.6e-90100Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
        RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK

A0A6J1EV18 Flap endonuclease 19.6e-90100Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
        RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK

A0A6J1HYJ9 Flap endonuclease 19.6e-90100Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
        RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK

A0A6J1I0P7 Flap endonuclease 19.6e-90100Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
        RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK

SwissProt top hitse value%identityAlignment
B4FHY0 Flap endonuclease 16.0e-8188.1Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAPK MKEQKFESYFGRKIA+DASMSIYQFLIVVGR+G E LTNEAGEVTSHLQGMFNRTIRLLEAG+KPVYVFDGKPPD+KKQELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALC
        RYSKR DAT DL +A+EVG+K+ IEK SKRTVKVT+QHN+DCKRLLRLMGVPV+EAPSEAEA+CAALC
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALC

B8AW67 Flap endonuclease 1-A8.6e-8086.9Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAPK MKEQKFESYFGR+IA+DASMSIYQFLIVVGR+G E LTNEAGEVTSHLQGMFNRTIRLLEAG+KPVYVFDGKPPDLKKQELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALC
        RYSKR DAT +L +A+E G+K+ IEKFSKRTVKVTKQHN++CKRLLRLMGVPV+EAP EAEA+CAALC
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALC

C5YUK3 Flap endonuclease 1-A2.3e-8086.05Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAPK MKEQKFESYFGRKIAIDASMSIYQFLIVVGR+G E LTNEAGEVTSHLQGMFNRTIRLLEAG+KPVYVFDGKPPD+KK+ELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
        R+SKR DAT DL +A+E G+K+ +EK SKRTVKVT QHNDDCKRLLRLMGVPV+EAPSEAEA+CAALCK  K
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK

C6TEX6 Flap endonuclease 12.1e-8692.44Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAPK MKE KFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMF+RTIRLLEAG+KPVYVFDGKPPDLKKQELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
        RYSKRA+AT DL++A+E  NKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPV+EAPSEAEAQCAALCK GK
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK

O65251 Flap endonuclease 11.8e-8591.86Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAP  MKEQKFESYFGRKIA+DASMSIYQFLIVVGR+GTEMLTNEAGEVTSHLQGMFNRTIRLLEAG+KPVYVFDGKPP+LK+QELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
        RYSKRADATADL  AIE GNKEDIEK+SKRTVKVTKQHNDDCKRLLRLMGVPV+EA SEAEAQCAALCK GK
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK

Arabidopsis top hitse value%identityAlignment
AT1G01880.1 5'-3' exonuclease family protein1.1e-0829.87Show/hide
Query:  KEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLL-EAGVKPVYVFDGKPPDLKKQELAKRYSKRADATADLADAIE
        ++Q F+    +++A+D S  I Q    V          +   +  HL+  F RTI L  + G  PV+V DG P  LK Q    R+ + +         I+
Subjt:  KEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLL-EAGVKPVYVFDGKPPDLKKQELAKRYSKRADATADLADAIE

Query:  VGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLG
         G   +  K     V+       +C  LL L+G+PV++A  EAEA CA L   G
Subjt:  VGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLG

AT1G01880.2 5'-3' exonuclease family protein1.2e-0729.87Show/hide
Query:  KEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLL-EAGVKPVYVFDGKPPDLKKQELAKRYSKRADATADLADAIE
        ++Q F+    +++A+D S  I Q    V          +   +  HL+  F RTI L  + G  PV+V DG P  LK Q    R+ + +         I+
Subjt:  KEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLL-EAGVKPVYVFDGKPPDLKKQELAKRYSKRADATADLADAIE

Query:  VGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLG
         G   +  K     V+       +C+ LL L+G+PV++A  EAEA CA L   G
Subjt:  VGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLG

AT3G28030.1 5'-3' exonuclease family protein3.3e-1029.56Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MG++GL +LL   AP G +    E+   +++AIDAS+ + QF+  +     +M+ N      +HL G F R  +LL    KP++VFDG  P LK++ +  
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADL---ADAIEVGNKEDIE-KFSKRTVKVTKQHNDDCKRLLRLMGVPVIE
        R  +R +A   +   A+ + +   +DI  K   + +K  +   DD  R+ + +    +E
Subjt:  RYSKRADATADL---ADAIEVGNKEDIE-KFSKRTVKVTKQHNDDCKRLLRLMGVPVIE

AT5G26680.1 5'-3' exonuclease family protein1.3e-8691.86Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAP  MKEQKFESYFGRKIA+DASMSIYQFLIVVGR+GTEMLTNEAGEVTSHLQGMFNRTIRLLEAG+KPVYVFDGKPP+LK+QELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
        RYSKRADATADL  AIE GNKEDIEK+SKRTVKVTKQHNDDCKRLLRLMGVPV+EA SEAEAQCAALCK GK
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK

AT5G26680.2 5'-3' exonuclease family protein1.3e-8691.86Show/hide
Query:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK
        MGIKGLTKLLADNAP  MKEQKFESYFGRKIA+DASMSIYQFLIVVGR+GTEMLTNEAGEVTSHLQGMFNRTIRLLEAG+KPVYVFDGKPP+LK+QELAK
Subjt:  MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAK

Query:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK
        RYSKRADATADL  AIE GNKEDIEK+SKRTVKVTKQHNDDCKRLLRLMGVPV+EA SEAEAQCAALCK GK
Subjt:  RYSKRADATADLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATTAAGGGTTTAACCAAGCTTTTAGCTGACAATGCCCCCAAAGGCATGAAGGAGCAGAAGTTCGAAAGCTATTTTGGACGAAAAATTGCAATTGATGCCAGCAT
GAGTATCTATCAATTTCTTATTGTCGTGGGAAGAAGTGGGACTGAGATGTTGACCAACGAAGCTGGTGAAGTCACTAGCCATTTGCAAGGGATGTTTAACCGGACAATAA
GGCTTCTCGAAGCTGGAGTTAAGCCAGTCTATGTGTTTGATGGAAAGCCTCCTGATTTGAAAAAGCAAGAACTTGCAAAACGTTATTCAAAGAGAGCAGATGCTACTGCA
GACCTGGCAGATGCAATTGAGGTTGGAAACAAGGAGGACATTGAGAAATTCAGTAAAAGGACGGTCAAGGTTACAAAGCAGCACAATGATGACTGTAAAAGACTTTTGAG
ACTCATGGGAGTGCCTGTGATCGAGGCTCCCTCCGAAGCTGAGGCACAATGTGCTGCGCTTTGCAAGTTAGGAAAGGCAAGGATGCAATATTCTCTGATGAAATAA
mRNA sequenceShow/hide mRNA sequence
CTTGCTTCGTCTTCCAAAGCGGTTCCTTCTCTGCTACTGCGACGCCTTGCCATGGGCATTAAGGGTTTAACCAAGCTTTTAGCTGACAATGCCCCCAAAGGCATGAAGGA
GCAGAAGTTCGAAAGCTATTTTGGACGAAAAATTGCAATTGATGCCAGCATGAGTATCTATCAATTTCTTATTGTCGTGGGAAGAAGTGGGACTGAGATGTTGACCAACG
AAGCTGGTGAAGTCACTAGCCATTTGCAAGGGATGTTTAACCGGACAATAAGGCTTCTCGAAGCTGGAGTTAAGCCAGTCTATGTGTTTGATGGAAAGCCTCCTGATTTG
AAAAAGCAAGAACTTGCAAAACGTTATTCAAAGAGAGCAGATGCTACTGCAGACCTGGCAGATGCAATTGAGGTTGGAAACAAGGAGGACATTGAGAAATTCAGTAAAAG
GACGGTCAAGGTTACAAAGCAGCACAATGATGACTGTAAAAGACTTTTGAGACTCATGGGAGTGCCTGTGATCGAGGCTCCCTCCGAAGCTGAGGCACAATGTGCTGCGC
TTTGCAAGTTAGGAAAGGCAAGGATGCAATATTCTCTGATGAAATAA
Protein sequenceShow/hide protein sequence
MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAKRYSKRADATA
DLADAIEVGNKEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKARMQYSLMK