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CmoCh11G012580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G012580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmajor latex allergen Hev b 5-like
Genome locationCmo_Chr11:8021411..8021884
RNA-Seq ExpressionCmoCh11G012580
SyntenyCmoCh11G012580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588522.1 hypothetical protein SDJN03_17087, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3051.87Show/hide
Query:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPP-----------------------------------
        MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPP                                   
Subjt:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPP-----------------------------------

Query:  -------------------------------------------------------------SLDSLLVEKEAEVPSVTKAEEQPPKEAAAV--AGAKEVK
                                                                     SLDSLLVEKEAEVPS+TKAEEQPPKEAAA   AGAKEV 
Subjt:  -------------------------------------------------------------SLDSLLVEKEAEVPSVTKAEEQPPKEAAAV--AGAKEVK

Query:  KSEEKAAKRDEKSA
        KSE KAAK+DEKSA
Subjt:  KSEEKAAKRDEKSA

KAG7022371.1 hypothetical protein SDJN02_16102, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-3868.29Show/hide
Query:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPP-----------------------------------
        MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPP                                   
Subjt:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPP-----------------------------------

Query:  -------------SLDSLLVEKEAEVPSVTKAEEQPPKEAAAVAGAKEVKKSEEKAAKRDEKSA
                     SLDSLLVEKEAEVPS+TKAEEQPPKEAAAVAGAKEV KSE KAAK+DEKSA
Subjt:  -------------SLDSLLVEKEAEVPSVTKAEEQPPKEAAAVAGAKEVKKSEEKAAKRDEKSA

XP_022931727.1 patellin-1-like [Cucurbita moschata]7.0e-48100Show/hide
Query:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSLLVEKEAEVPSVTKAEEQPPKEAAAVAGAKE
        MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSLLVEKEAEVPSVTKAEEQPPKEAAAVAGAKE
Subjt:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSLLVEKEAEVPSVTKAEEQPPKEAAAVAGAKE

Query:  VKKSEEKAAKRDEKSA
        VKKSEEKAAKRDEKSA
Subjt:  VKKSEEKAAKRDEKSA

XP_022970143.1 uncharacterized protein LOC111469128 [Cucurbita maxima]2.4e-3272.73Show/hide
Query:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEE------------------------AKPPSLDSLLVEKEA
        MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVD VIDE  KDDTE VVVEE                        AKPPSLDSLLVEK+A
Subjt:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEE------------------------AKPPSLDSLLVEKEA

Query:  EVPSVTKAEEQPPKEAAAVAGAKEVKKSEEKA
        EVPSVTKAEEQPPK  A VAGA+EVKK+E  A
Subjt:  EVPSVTKAEEQPPKEAAAVAGAKEVKKSEEKA

XP_023531836.1 coiled-coil domain-containing protein 8-like [Cucurbita pepo subsp. pepo]8.9e-2743.65Show/hide
Query:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPP-----------------------------------
        MGACATKPKAKVDTAVIPAPE VDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPP                                   
Subjt:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPP-----------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -SLDSLLVEKEAEVPSVTKAEEQPPKEAAAVAGAKEVKKSEEKAAKRDEKSA
         SLDSLLVEKEAEV SVTKAEEQPPK AAAV GA+EVKKSEEKAAK+DEKSA
Subjt:  -SLDSLLVEKEAEVPSVTKAEEQPPKEAAAVAGAKEVKKSEEKAAKRDEKSA

TrEMBL top hitse value%identityAlignment
A0A0A0K3E6 Uncharacterized protein6.7e-2063.93Show/hide
Query:  MGACATKPKAKV-DTAVIPAPEPVD-DMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSLLVEKEA----EVPSVTKAEEQP-PKEAA
        MGACATKPK K  D A IPAPEP+D D+VKN EEVK VE+EK+ D   DEKKK++ EKVVV+E KPPSL SLLVEKEA    EV  + KAEE+P  KE A
Subjt:  MGACATKPKAKV-DTAVIPAPEPVD-DMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSLLVEKEA----EVPSVTKAEEQP-PKEAA

Query:  AVAGAKEVKKSEEKAAKRDEKS
        A     E+KKSEEK  ++DEKS
Subjt:  AVAGAKEVKKSEEKAAKRDEKS

A0A1S3BGT9 major latex allergen Hev b 5-like6.3e-1858.54Show/hide
Query:  MGACATKPKAKV-DTAVIPAPEPVD-DMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSLLVEKE-----AEVPSVTKAEEQPP-KEA
        MGACATKPK K  D A IPAPEP+D D+VKN EE+KVVE+EK+VD   DEKKK+D EKV+VE+ K PSL SLLVEKE      EV  + KA+E+P  +E 
Subjt:  MGACATKPKAKV-DTAVIPAPEPVD-DMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSLLVEKE-----AEVPSVTKAEEQPP-KEA

Query:  AAVAGAKEVKKSEEKAAKRDEKS
         A     E K+SEEK  +++EKS
Subjt:  AAVAGAKEVKKSEEKAAKRDEKS

A0A6J1DY67 salt stress root protein RS1-like2.2e-1550.38Show/hide
Query:  MGACATKPKAKVDTAVIPAPEP-----VDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSLLVEKE----AEVPSVTKAEEQPPK-
        MGACATKPK K D   IPAPEP     ++ M+K+TEEVKVV+++K+VD    + KK+DT+K+VVEE K  SL SLLVEK+     EVPS TK E+  PK 
Subjt:  MGACATKPKAKVDTAVIPAPEP-----VDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSLLVEKE----AEVPSVTKAEEQPPK-

Query:  --------EAAAVAGAKEVKKSEEKAAKRDEKS
                + AAV   +++KK ++KA  +DEKS
Subjt:  --------EAAAVAGAKEVKKSEEKAAKRDEKS

A0A6J1EUI1 patellin-1-like3.4e-48100Show/hide
Query:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSLLVEKEAEVPSVTKAEEQPPKEAAAVAGAKE
        MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSLLVEKEAEVPSVTKAEEQPPKEAAAVAGAKE
Subjt:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSLLVEKEAEVPSVTKAEEQPPKEAAAVAGAKE

Query:  VKKSEEKAAKRDEKSA
        VKKSEEKAAKRDEKSA
Subjt:  VKKSEEKAAKRDEKSA

A0A6J1I303 uncharacterized protein LOC1114691281.2e-3272.73Show/hide
Query:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEE------------------------AKPPSLDSLLVEKEA
        MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVD VIDE  KDDTE VVVEE                        AKPPSLDSLLVEK+A
Subjt:  MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEE------------------------AKPPSLDSLLVEKEA

Query:  EVPSVTKAEEQPPKEAAAVAGAKEVKKSEEKA
        EVPSVTKAEEQPPK  A VAGA+EVKK+E  A
Subjt:  EVPSVTKAEEQPPKEAAAVAGAKEVKKSEEKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCCTGTGCCACCAAGCCTAAGGCCAAGGTCGATACGGCCGTCATCCCCGCACCCGAGCCTGTCGACGACATGGTGAAGAACACCGAGGAAGTTAAGGTCGTGGA
AGACGAGAAGAGGGTCGATGATGTAATTGATGAAAAGAAGAAGGACGACACCGAGAAAGTTGTCGTTGAGGAAGCCAAGCCTCCGTCTCTCGACTCCTTGCTCGTTGAGA
AGGAAGCTGAAGTTCCAAGCGTGACGAAGGCGGAGGAGCAGCCACCGAAGGAGGCGGCGGCAGTGGCAGGGGCGAAAGAAGTGAAGAAGAGTGAAGAGAAAGCAGCGAAG
AGGGATGAGAAGAGCGCATGA
mRNA sequenceShow/hide mRNA sequence
GATCTTCATTTCTTGTCATCTTTTTCTTCCTCGGTTGTTCTTCCTATCATGGGTGCCTGTGCCACCAAGCCTAAGGCCAAGGTCGATACGGCCGTCATCCCCGCACCCGA
GCCTGTCGACGACATGGTGAAGAACACCGAGGAAGTTAAGGTCGTGGAAGACGAGAAGAGGGTCGATGATGTAATTGATGAAAAGAAGAAGGACGACACCGAGAAAGTTG
TCGTTGAGGAAGCCAAGCCTCCGTCTCTCGACTCCTTGCTCGTTGAGAAGGAAGCTGAAGTTCCAAGCGTGACGAAGGCGGAGGAGCAGCCACCGAAGGAGGCGGCGGCA
GTGGCAGGGGCGAAAGAAGTGAAGAAGAGTGAAGAGAAAGCAGCGAAGAGGGATGAGAAGAGCGCATGAAGAAATAAAA
Protein sequenceShow/hide protein sequence
MGACATKPKAKVDTAVIPAPEPVDDMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVVVEEAKPPSLDSLLVEKEAEVPSVTKAEEQPPKEAAAVAGAKEVKKSEEKAAK
RDEKSA