; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G012680 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G012680
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpentatricopeptide repeat-containing protein At4g38150-like
Genome locationCmo_Chr11:8103881..8106456
RNA-Seq ExpressionCmoCh11G012680
SyntenyCmoCh11G012680
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588516.1 Protein ACTIVITY OF BC1 COMPLEX KINASE 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]7.8e-17693.08Show/hide
Query:  GECGSSGRISKLVKNSQERAFAAHSAEQHPSAASPLTEREVNAQFAKAMANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIFYINACNNRLF
        G  G  GRI  +          AHSAEQHPSAASPLTEREVNAQF KAMANRITRAL+VACTTIASSPSSFSPNPSFLNHHFRCKPPTIFYI ACNNRLF
Subjt:  GECGSSGRISKLVKNSQERAFAAHSAEQHPSAASPLTEREVNAQFAKAMANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIFYINACNNRLF

Query:  AYSSSSEANKINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQ
        AYSSSSEANKINTKVNFSI HSDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQ
Subjt:  AYSSSSEANKINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQ

Query:  LFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAK
        LFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTP AYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTA+FEALVRDAK
Subjt:  LFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAK

Query:  VDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
        VDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPL RTLINILFNK
Subjt:  VDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK

KAG6588578.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]3.9e-16787.26Show/hide
Query:  GECGSSGRI--SKLVKNSQERAFAAHSAEQHPSAA----SPLTEREVNAQFAKAMANRITRALLVACTTIASSPSSFSPNPSFLNHHFRC-------KPP
        G  G  GRI   +     Q    A +SAEQHPSAA    +P +ERE+NAQF KAMANR+TRALLVACTTIASSPSSF PNPSFLNHHFRC       KPP
Subjt:  GECGSSGRI--SKLVKNSQERAFAAHSAEQHPSAA----SPLTEREVNAQFAKAMANRITRALLVACTTIASSPSSFSPNPSFLNHHFRC-------KPP

Query:  TIFYINACNNRLFAYSSSSEANKINTKVNFSIPHSDEDEEDDFRVGSV-EEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMF
         IFYINACNNRLFAYSSSSEANKINTKVNFSI HSDEDEEDDFRVGSV EEVGK+KNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMF
Subjt:  TIFYINACNNRLFAYSSSSEANKINTKVNFSIPHSDEDEEDDFRVGSV-EEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMF

Query:  DEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAG
        DE+SKDGLTHEALQLFS+IKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTP AYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAG
Subjt:  DEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAG

Query:  TYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
        TYTAVFEALVRD KV+EARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
Subjt:  TYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK

XP_022931685.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata]4.4e-187100Show/hide
Query:  SKLVKNSQERAFAAHSAEQHPSAASPLTEREVNAQFAKAMANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIFYINACNNRLFAYSSSSEAN
        SKLVKNSQERAFAAHSAEQHPSAASPLTEREVNAQFAKAMANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIFYINACNNRLFAYSSSSEAN
Subjt:  SKLVKNSQERAFAAHSAEQHPSAASPLTEREVNAQFAKAMANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIFYINACNNRLFAYSSSSEAN

Query:  KINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKG
        KINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKG
Subjt:  KINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKG

Query:  HMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLV
        HMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLV
Subjt:  HMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLV

Query:  QMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
        QMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
Subjt:  QMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK

XP_022969848.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima]4.2e-16197.99Show/hide
Query:  MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIFYINACNNRLFAYSSSSEANKINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPY
        MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKP TIFYINACNNRLFAYSSSSEANKINTKVNFSI HSDEDEEDDFRVGSV+EVGKTKNLPPPY
Subjt:  MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIFYINACNNRLFAYSSSSEANKINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPY

Query:  DPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPI
        DPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNA KMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTP 
Subjt:  DPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPI

Query:  AYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
        AYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFV NEKDVKEILHTKRGRGPLFRTLINILFNK
Subjt:  AYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK

XP_023530438.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita pepo subsp. pepo]1.8e-15997.32Show/hide
Query:  MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIFYINACNNRLFAYSSSSEANKINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPY
        MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRC+PPTIFYINA NNRLFAYSSSSEANKINTKVNFSI HSDEDEE+DFRVGSVEEVGKTKNLPPPY
Subjt:  MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIFYINACNNRLFAYSSSSEANKINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPY

Query:  DPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPI
        DPFSKKPVVEEA DPKNLQEIFHKMRTDGFLNNAVKMFD MSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTP 
Subjt:  DPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPI

Query:  AYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
        AYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEAR LLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
Subjt:  AYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK

TrEMBL top hitse value%identityAlignment
A0A6J1DUN8 pentatricopeptide repeat-containing protein At4g38150-like1.7e-12076.1Show/hide
Query:  MANRITRALLVACTTIASSPSSFSPNP------SFLNHHF---------RCKPPTIFYINACNNRLFAYSSSSEANKINTKVNFSIPHSDEDEEDD----
        MAN ++RALLVA  TI SS  SF PNP      SFLN +F         +  PP IF+INA N RL+A SSSSEANKINTKVNFSI HSDED++DD    
Subjt:  MANRITRALLVACTTIASSPSSFSPNP------SFLNHHF---------RCKPPTIFYINACNNRLFAYSSSSEANKINTKVNFSIPHSDEDEEDD----

Query:  FRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQ
         +VG+V E+ K+K LPPPYDPFSKKPVVEE EDPKNLQEIFHKMRTDG  N+AVKMFD +SKDG THEALQLFS IK+KGHMPDVVAHTAVIEAYVNAGQ
Subjt:  FRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQ

Query:  SKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHT
         KEAHKVYLRMLASGVTP AYTYTVLIKGLAADPKFVGDAK  LLEMMGRGLRPNAGTYTAVFEAL R+++V+EARE + QMEAKGFV NEKDVKE+L+ 
Subjt:  SKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHT

Query:  KRGRGPLFRTLINILFNK
        KR RGPLFRTLINILFNK
Subjt:  KRGRGPLFRTLINILFNK

A0A6J1F064 pentatricopeptide repeat-containing protein At4g38150-like2.1e-187100Show/hide
Query:  SKLVKNSQERAFAAHSAEQHPSAASPLTEREVNAQFAKAMANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIFYINACNNRLFAYSSSSEAN
        SKLVKNSQERAFAAHSAEQHPSAASPLTEREVNAQFAKAMANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIFYINACNNRLFAYSSSSEAN
Subjt:  SKLVKNSQERAFAAHSAEQHPSAASPLTEREVNAQFAKAMANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIFYINACNNRLFAYSSSSEAN

Query:  KINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKG
        KINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKG
Subjt:  KINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKG

Query:  HMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLV
        HMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLV
Subjt:  HMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLV

Query:  QMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
        QMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
Subjt:  QMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK

A0A6J1I251 pentatricopeptide repeat-containing protein At4g38150-like2.0e-16197.99Show/hide
Query:  MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIFYINACNNRLFAYSSSSEANKINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPY
        MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKP TIFYINACNNRLFAYSSSSEANKINTKVNFSI HSDEDEEDDFRVGSV+EVGKTKNLPPPY
Subjt:  MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIFYINACNNRLFAYSSSSEANKINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPY

Query:  DPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPI
        DPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNA KMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTP 
Subjt:  DPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPI

Query:  AYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
        AYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFV NEKDVKEILHTKRGRGPLFRTLINILFNK
Subjt:  AYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK

A0A6P3YRG9 pentatricopeptide repeat-containing protein At4g38150-like1.5e-9262.25Show/hide
Query:  MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIF--YINACNNRLFAYSSSSEANKINTKVNFSIPHSD-EDEEDDFRVGSVEEVGKTKNLP
        +++ IT    +   + +SS S  + N   L      K PT         ++RLF   SSSE  +INTKVNFS+  SD ED++D+ +  + +E+ K+K LP
Subjt:  MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIF--YINACNNRLFAYSSSSEANKINTKVNFSIPHSD-EDEEDDFRVGSVEEVGKTKNLP

Query:  PPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGV
        PPYDPF+KKPV+EE EDPK+LQEIFH MR DG LNNAVKMFD +SKDGLTHEAL+LF++IKDKGHMPDVVAHTAV+EAY NAGQSKEA KV++RMLASGV
Subjt:  PPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGV

Query:  TPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILF
        TP AYTYTVLIKGLAADPK++GDAKK+LLEMMG+G+RPNAG YTAVFEA  ++ KV++A + L +M+AKGF P+EK VKE+L+ K  RGP+FRT++NILF
Subjt:  TPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILF

Query:  NK
         K
Subjt:  NK

A0A6P3ZML7 pentatricopeptide repeat-containing protein At4g38150-like1.5e-9262.25Show/hide
Query:  MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIF--YINACNNRLFAYSSSSEANKINTKVNFSIPHSD-EDEEDDFRVGSVEEVGKTKNLP
        +++ IT    +   + +SS S  + N   L      K PT         ++RLF   SSSE  +INTKVNFS+  SD ED++D+ +  + +E+ K+K LP
Subjt:  MANRITRALLVACTTIASSPSSFSPNPSFLNHHFRCKPPTIF--YINACNNRLFAYSSSSEANKINTKVNFSIPHSD-EDEEDDFRVGSVEEVGKTKNLP

Query:  PPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGV
        PPYDPF+KKPV+EE EDPK+LQEIFH MR DG LNNAVKMFD +SKDGLTHEAL+LF++IKDKGHMPDVVAHTAV+EAY NAGQSK+A KV++RMLASGV
Subjt:  PPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGV

Query:  TPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILF
        TP AYTYTVLIKGLAADPK++GDAKK+LLEMMG+G+RPNAG YTAVFEA  ++ KV++A + L QM+AKGF P+EK VKE+L+ K  RGP+FRT++NILF
Subjt:  TPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILF

Query:  NK
         K
Subjt:  NK

SwissProt top hitse value%identityAlignment
B8Y6I0 Pentatricopeptide repeat-containing protein 10, chloroplastic2.9e-1639.58Show/hide
Query:  DGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLE
        DGF   A  +     +DGL  EA+  F ++K +GH P VV + A+++ +  AG   EA +V   M  +G  P A TY  L  G  A   F  +A + L  
Subjt:  DGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLE

Query:  MMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPN
        M  +GL PNA TY  V  A     KVDEA  L  QM+  GFVPN
Subjt:  MMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPN

Q9FLL3 Pentatricopeptide repeat-containing protein At5g41170, mitochondrial1.0e-1331.11Show/hide
Query:  MFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPN
        + D + K+G  + AL LF ++++ G  PDVV +T+++    N+G+ ++A  +   M    + P   T+  LI     + KF+ DA++   EM+   + PN
Subjt:  MFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPN

Query:  AGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPN
          TYT++      +  VDEAR++   ME KG  P+
Subjt:  AGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPN

Q9FNL2 Pentatricopeptide repeat-containing protein At5g461001.4e-1331.52Show/hide
Query:  RTDGFLNNAVKMFDEMSKDGL-------------------THEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTV
        R DG ++  +K+F EM K G                      EA +LF+E+ +K   P VV +T++I     +    EA +    M + G+ P  +TY+ 
Subjt:  RTDGFLNNAVKMFDEMSKDGL-------------------THEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTV

Query:  LIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPN
        L+ GL  D + +  A +    MM RG RPN  TYT +   L ++ K+ EA ELL +M  +G  P+
Subjt:  LIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPN

Q9LSL9 Pentatricopeptide repeat-containing protein At5g655608.0e-1432.89Show/hide
Query:  MFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPN
        M D + K     EA  LF  ++ KG  P+VV +TA+I+ Y  AG+  EAH +  +ML+    P + T+  LI GL AD K + +A     +M+  GL+P 
Subjt:  MFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPN

Query:  AGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPL
          T T +   L++D   D A     QM + G  P+       + T    G L
Subjt:  AGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPL

Q9SZL5 Pentatricopeptide repeat-containing protein At4g381501.1e-2634.47Show/hide
Query:  SDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVI
        SD+   + F++G  ++  +T    P  + + ++P+      P++  EIF KM+  G + NAV M D + KDGL  EA++LF  ++DKG +P+VV +TAV+
Subjt:  SDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVI

Query:  EAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEK
        EA+  A + ++A +++ +M  +G+ P A++Y VL++GL  +   + DA  F  EM+  G  PN  T+  + +AL R   V++A+  +  +  KGF  N K
Subjt:  EAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEK

Query:  DVKEIL
         VKE +
Subjt:  DVKEIL

Arabidopsis top hitse value%identityAlignment
AT4G38150.1 Pentatricopeptide repeat (PPR) superfamily protein7.6e-2834.47Show/hide
Query:  SDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVI
        SD+   + F++G  ++  +T    P  + + ++P+      P++  EIF KM+  G + NAV M D + KDGL  EA++LF  ++DKG +P+VV +TAV+
Subjt:  SDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVI

Query:  EAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEK
        EA+  A + ++A +++ +M  +G+ P A++Y VL++GL  +   + DA  F  EM+  G  PN  T+  + +AL R   V++A+  +  +  KGF  N K
Subjt:  EAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEK

Query:  DVKEIL
         VKE +
Subjt:  DVKEIL

AT4G38150.2 Pentatricopeptide repeat (PPR) superfamily protein7.6e-2834.47Show/hide
Query:  SDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVI
        SD+   + F++G  ++  +T    P  + + ++P+      P++  EIF KM+  G + NAV M D + KDGL  EA++LF  ++DKG +P+VV +TAV+
Subjt:  SDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVI

Query:  EAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEK
        EA+  A + ++A +++ +M  +G+ P A++Y VL++GL  +   + DA  F  EM+  G  PN  T+  + +AL R   V++A+  +  +  KGF  N K
Subjt:  EAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEK

Query:  DVKEIL
         VKE +
Subjt:  DVKEIL

AT5G03560.2 Tetratricopeptide repeat (TPR)-like superfamily protein2.3e-8866.67Show/hide
Query:  LFAYSSSSEANKINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEA
        +FA   SSE  ++NTKVNFS+   D DEE + +V   E+  K +  PPPYDPFSKKP +EE EDPKNLQEIFHKMRT+GF N AVKMFD +SKDG THEA
Subjt:  LFAYSSSSEANKINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDGFLNNAVKMFDEMSKDGLTHEA

Query:  LQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRD
        L+LFS+IKDK  MPDVVAHTA++EAY NAGQ+KE  KV++RMLASGV+P AYTY+VLIKGLAAD K   DAKK+LLEMMG G+ PNA TYTAVFEA VR+
Subjt:  LQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGTYTAVFEALVRD

Query:  AKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK
         K + ARELL +M+ KGFVP+EK V+E L  KRG+  +FRT+IN+LF+K
Subjt:  AKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK

AT5G41170.1 Pentatricopeptide repeat (PPR-like) superfamily protein7.4e-1531.11Show/hide
Query:  MFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPN
        + D + K+G  + AL LF ++++ G  PDVV +T+++    N+G+ ++A  +   M    + P   T+  LI     + KF+ DA++   EM+   + PN
Subjt:  MFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPN

Query:  AGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPN
          TYT++      +  VDEAR++   ME KG  P+
Subjt:  AGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPN

AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein5.7e-1532.89Show/hide
Query:  MFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPN
        M D + K     EA  LF  ++ KG  P+VV +TA+I+ Y  AG+  EAH +  +ML+    P + T+  LI GL AD K + +A     +M+  GL+P 
Subjt:  MFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPN

Query:  AGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPL
          T T +   L++D   D A     QM + G  P+       + T    G L
Subjt:  AGTYTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAAGCAAGCTTTGTCTGCAATTTGCATGCATCATCTGAAATTGCTGCCCAATTTCTTATTCATATGTTTGTCGGATGTGATTGTTCGGGTGAATGTGGTTCATCA
GGTCGGATGTGATTGTTCGGGTGAATGTGGTTCATCAGGTCGGATTTCTAAACTTGTTAAGAACTCACAGGAAAGAGCATTTGCAGCGCACTCCGCCGAACAGCATCCAT
CTGCCGCATCCCCACTTACAGAGAGGGAGGTTAACGCGCAATTCGCCAAGGCTATGGCGAACAGAATAACTCGAGCCCTTCTTGTTGCCTGCACCACCATCGCCTCATCT
CCTTCATCCTTCTCCCCCAACCCATCGTTTCTAAATCATCATTTTCGTTGCAAACCACCGACCATTTTCTATATCAACGCCTGCAACAACAGATTGTTCGCCTACTCCTC
ATCTTCAGAAGCTAACAAGATCAACACCAAAGTCAATTTCTCAATCCCACACTCGGATGAAGACGAAGAAGACGATTTTCGGGTTGGGTCCGTAGAAGAAGTGGGCAAAA
CCAAAAATCTCCCACCGCCGTATGATCCCTTCAGCAAGAAGCCGGTTGTGGAAGAGGCGGAAGACCCAAAGAATTTGCAGGAAATCTTCCATAAGATGAGGACAGATGGT
TTTTTAAACAATGCCGTCAAGATGTTCGACGAAATGTCTAAGGATGGTCTAACCCACGAGGCTCTGCAGCTCTTCTCTGAAATTAAGGACAAAGGTCACATGCCTGATGT
TGTCGCCCACACAGCCGTCATAGAAGCCTATGTGAATGCGGGTCAGAGCAAGGAAGCTCACAAGGTGTACCTGCGAATGCTTGCCTCTGGAGTGACCCCAATTGCCTATA
CTTACACTGTTCTAATCAAAGGGCTTGCTGCGGATCCCAAGTTCGTGGGGGATGCGAAGAAGTTCTTGCTGGAAATGATGGGCAGGGGATTGCGACCCAATGCTGGGACC
TATACTGCCGTCTTTGAGGCTCTTGTGAGGGATGCCAAAGTGGATGAAGCAAGAGAGTTGTTGGTGCAAATGGAGGCTAAGGGGTTTGTGCCTAATGAGAAGGATGTGAA
GGAGATTCTCCATACCAAAAGGGGAAGGGGACCCTTGTTTAGGACCCTCATCAACATTCTCTTCAACAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAAAGCAAGCTTTGTCTGCAATTTGCATGCATCATCTGAAATTGCTGCCCAATTTCTTATTCATATGTTTGTCGGATGTGATTGTTCGGGTGAATGTGGTTCATCA
GGTCGGATGTGATTGTTCGGGTGAATGTGGTTCATCAGGTCGGATTTCTAAACTTGTTAAGAACTCACAGGAAAGAGCATTTGCAGCGCACTCCGCCGAACAGCATCCAT
CTGCCGCATCCCCACTTACAGAGAGGGAGGTTAACGCGCAATTCGCCAAGGCTATGGCGAACAGAATAACTCGAGCCCTTCTTGTTGCCTGCACCACCATCGCCTCATCT
CCTTCATCCTTCTCCCCCAACCCATCGTTTCTAAATCATCATTTTCGTTGCAAACCACCGACCATTTTCTATATCAACGCCTGCAACAACAGATTGTTCGCCTACTCCTC
ATCTTCAGAAGCTAACAAGATCAACACCAAAGTCAATTTCTCAATCCCACACTCGGATGAAGACGAAGAAGACGATTTTCGGGTTGGGTCCGTAGAAGAAGTGGGCAAAA
CCAAAAATCTCCCACCGCCGTATGATCCCTTCAGCAAGAAGCCGGTTGTGGAAGAGGCGGAAGACCCAAAGAATTTGCAGGAAATCTTCCATAAGATGAGGACAGATGGT
TTTTTAAACAATGCCGTCAAGATGTTCGACGAAATGTCTAAGGATGGTCTAACCCACGAGGCTCTGCAGCTCTTCTCTGAAATTAAGGACAAAGGTCACATGCCTGATGT
TGTCGCCCACACAGCCGTCATAGAAGCCTATGTGAATGCGGGTCAGAGCAAGGAAGCTCACAAGGTGTACCTGCGAATGCTTGCCTCTGGAGTGACCCCAATTGCCTATA
CTTACACTGTTCTAATCAAAGGGCTTGCTGCGGATCCCAAGTTCGTGGGGGATGCGAAGAAGTTCTTGCTGGAAATGATGGGCAGGGGATTGCGACCCAATGCTGGGACC
TATACTGCCGTCTTTGAGGCTCTTGTGAGGGATGCCAAAGTGGATGAAGCAAGAGAGTTGTTGGTGCAAATGGAGGCTAAGGGGTTTGTGCCTAATGAGAAGGATGTGAA
GGAGATTCTCCATACCAAAAGGGGAAGGGGACCCTTGTTTAGGACCCTCATCAACATTCTCTTCAACAAGTAG
Protein sequenceShow/hide protein sequence
MQKQALSAICMHHLKLLPNFLFICLSDVIVRVNVVHQVGCDCSGECGSSGRISKLVKNSQERAFAAHSAEQHPSAASPLTEREVNAQFAKAMANRITRALLVACTTIASS
PSSFSPNPSFLNHHFRCKPPTIFYINACNNRLFAYSSSSEANKINTKVNFSIPHSDEDEEDDFRVGSVEEVGKTKNLPPPYDPFSKKPVVEEAEDPKNLQEIFHKMRTDG
FLNNAVKMFDEMSKDGLTHEALQLFSEIKDKGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVTPIAYTYTVLIKGLAADPKFVGDAKKFLLEMMGRGLRPNAGT
YTAVFEALVRDAKVDEARELLVQMEAKGFVPNEKDVKEILHTKRGRGPLFRTLINILFNK