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CmoCh11G012870 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G012870
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiondisease resistance protein RGA2-like
Genome locationCmo_Chr11:8630968..8643906
RNA-Seq ExpressionCmoCh11G012870
SyntenyCmoCh11G012870
Gene Ontology termsGO:0043531 - ADP binding (molecular function)
InterPro domainsIPR002182 - NB-ARC
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR041118 - Rx, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022934779.1 putative disease resistance protein RGA4 [Cucurbita moschata]1.3e-1751.24Show/hide
Query:  EILKNTNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFA
        E+ K+      + DDE+        A+  +LL+  +P++K N     I+ +    LGKT LAQS+YNDE TTK FE+KLWVCISEEFDVKVIVEKI+E A
Subjt:  EILKNTNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFA

Query:  TRKKPEIHQMDFQLQRLLTQL
        TRKKPEI QMD     L  Q+
Subjt:  TRKKPEIHQMDFQLQRLLTQL

XP_023530018.1 disease resistance protein RGA2-like [Cucurbita pepo subsp. pepo]6.4e-1747.2Show/hide
Query:  VMVLDDELDKLKHTISAMKAVLLDAEEPQSKS----------NAEHN--WISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIM
        ++  DDEL K + TIS +    +   +P  K+          N + N   I+ +    LGKTTLAQ++YN+E  TK F+LKLWVC+SE+FD+KVIVEKI+
Subjt:  VMVLDDELDKLKHTISAMKAVLLDAEEPQSKS----------NAEHN--WISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIM

Query:  EFATRKKPEIHQMDFQLQRLLTQLH
        EFATRKKPEI QMD     L T ++
Subjt:  EFATRKKPEIHQMDFQLQRLLTQLH

XP_023539563.1 uncharacterized protein LOC111800203 [Cucurbita pepo subsp. pepo]1.2e-1552.25Show/hide
Query:  EILKNTNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFA
        E+ K       + DDE+    H   A+  +LL+  +P  K N     I+ +    LGKTTLAQ +YN+E   K FELKLWVCIS+EFDVKVIVEKI+E A
Subjt:  EILKNTNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFA

Query:  TRKKPEIHQMD
        TRKKPEI QMD
Subjt:  TRKKPEIHQMD

XP_023547023.1 disease resistance protein RGA2-like isoform X1 [Cucurbita pepo subsp. pepo]1.2e-1533.48Show/hide
Query:  LDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLE------------------------------------------------------------
        +DDELD+LKHT+SAM+AVLLDAEE QSKS+A  NWISR++                                                            
Subjt:  LDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLE------------------------------------------------------------

Query:  -----------------------------------------RED------------------------------LGKTTLAQSIYNDERTTKRFELKLWV
                                                 R+D                              LGKT LAQS+YN+E  TK FELKLWV
Subjt:  -----------------------------------------RED------------------------------LGKTTLAQSIYNDERTTKRFELKLWV

Query:  CISEEFDVKVIVEKIMEFATRKKPEIHQMD
        CISE+FDVKVIVEKI+E AT KKPEI QMD
Subjt:  CISEEFDVKVIVEKIMEFATRKKPEIHQMD

XP_023547024.1 disease resistance protein RGA2-like isoform X2 [Cucurbita pepo subsp. pepo]1.2e-1533.48Show/hide
Query:  LDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLE------------------------------------------------------------
        +DDELD+LKHT+SAM+AVLLDAEE QSKS+A  NWISR++                                                            
Subjt:  LDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLE------------------------------------------------------------

Query:  -----------------------------------------RED------------------------------LGKTTLAQSIYNDERTTKRFELKLWV
                                                 R+D                              LGKT LAQS+YN+E  TK FELKLWV
Subjt:  -----------------------------------------RED------------------------------LGKTTLAQSIYNDERTTKRFELKLWV

Query:  CISEEFDVKVIVEKIMEFATRKKPEIHQMD
        CISE+FDVKVIVEKI+E AT KKPEI QMD
Subjt:  CISEEFDVKVIVEKIMEFATRKKPEIHQMD

TrEMBL top hitse value%identityAlignment
A0A6A6KZI4 NB-ARC domain-containing protein2.1e-1339.86Show/hide
Query:  FQFALEILKNTNKFVMV-------LDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNW--ISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEE
        F  A EI K      ++       L+D+L+KLK+T+S ++AVLL++   Q  +  E N   IS +    LGKTTLAQ +YNDER    FELK WVC+SE 
Subjt:  FQFALEILKNTNKFVMV-------LDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNW--ISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEE

Query:  FDVKVIVEKIMEFATRKKPEIHQMDFQLQRLLTQLH-----IMLKENW
        FDVK+I+EKI++    ++P+   +D    +L   ++     I+L E W
Subjt:  FDVKVIVEKIMEFATRKKPEIHQMDFQLQRLLTQLH-----IMLKENW

A0A6J1DHP6 putative disease resistance protein RGA39.4e-1440.71Show/hide
Query:  AVLLDAEEPQSKSNAEHNWISRLE------------------------------RED-----------------LGKTTLAQSIYNDERTTKRFELKLWV
        A +LDAEE QSKS+A  NW+SRL+                              ++D                 LGKTTLAQSIYND   TK FELKLW+
Subjt:  AVLLDAEEPQSKSNAEHNWISRLE------------------------------RED-----------------LGKTTLAQSIYNDERTTKRFELKLWV

Query:  CISEEFDVKVIVEKIMEFATRKKPEIHQMDFQLQRLLTQL
        C+ E+FDVK+I EKI+E AT+K+ E  +MD  L  L  ++
Subjt:  CISEEFDVKVIVEKIMEFATRKKPEIHQMDFQLQRLLTQL

A0A6J1EUW9 putative disease resistance protein RGA12.9e-1543.41Show/hide
Query:  TNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLERED------------LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIV
        + + +   DDEL K + TIS +    +    P  K+  +    + L+ ++            LGKT LAQS+YN+E  TK F+LKLWVC+SE+FD+KVIV
Subjt:  TNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLERED------------LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIV

Query:  EKIMEFATRKKPEIHQMDFQLQRLLTQLH
        EKI+E ATRKKPEI QMD     L T ++
Subjt:  EKIMEFATRKKPEIHQMDFQLQRLLTQLH

A0A6J1EUW9 putative disease resistance protein RGA11.8e-0473.68Show/hide
Query:  DELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLE
        DELDKLKHTI  M+AVLLDAEE QS S+A  NWISR++
Subjt:  DELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLE

A0A6J1EUW9 putative disease resistance protein RGA11.9e-1437.18Show/hide
Query:  EILKNTNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFA
        E+ +    + ++ DDE+   +    A+  +LLD      ++ A    I+ +    LGKT LAQS+YNDE TTK F LKLWVCISE+FDV VIV+KI+E A
Subjt:  EILKNTNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFA

Query:  TRKKPEIHQMDFQLQRLLTQL----HIMLK--------ENWMTKEIVVKEPSSGNK
        T KKPEI Q++F    L   +    ++++         E W+  + ++K+ + G++
Subjt:  TRKKPEIHQMDFQLQRLLTQL----HIMLK--------ENWMTKEIVVKEPSSGNK

A0A6J1F3J5 putative disease resistance protein RGA46.3e-1851.24Show/hide
Query:  EILKNTNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFA
        E+ K+      + DDE+        A+  +LL+  +P++K N     I+ +    LGKT LAQS+YNDE TTK FE+KLWVCISEEFDVKVIVEKI+E A
Subjt:  EILKNTNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFA

Query:  TRKKPEIHQMDFQLQRLLTQL
        TRKKPEI QMD     L  Q+
Subjt:  TRKKPEIHQMDFQLQRLLTQL

SwissProt top hitse value%identityAlignment
Q7XA39 Putative disease resistance protein RGA45.1e-0946.58Show/hide
Query:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQM-DFQ--LQRLLTQLHIML
        LGKTTLAQ I+NDER TK F  K+WVC+S++FD K +++ I+    R  P +  +  FQ  LQ LL     +L
Subjt:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQM-DFQ--LQRLLTQLHIML

Q7XA40 Putative disease resistance protein RGA31.9e-0836.36Show/hide
Query:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKK---PEIHQMDFQLQRLLTQLHIML---------KENWMTKEIVVKEPSSG
        LGKTTLAQ ++ND+R T+ F LK+WVC+S++FD K +++ I+E    K     ++  +  +LQ LL      L         +E W     V+K  +SG
Subjt:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKK---PEIHQMDFQLQRLLTQLHIML---------KENWMTKEIVVKEPSSG

Q7XA42 Putative disease resistance protein RGA13.7e-0732.74Show/hide
Query:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKK---PEIHQMDFQLQRLLTQLHIML---------KENWMTKEIVVKEPSSGN
        LGKTTL+Q ++ND+R T+RF  K+W+CIS++F+ K +++ I+E    K     ++  +  +LQ LL      L         +  W     V+K  +SG 
Subjt:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKK---PEIHQMDFQLQRLLTQLHIML---------KENWMTKEIVVKEPSSGN

Query:  KNDKMSFVCQKTR
             +FV   TR
Subjt:  KNDKMSFVCQKTR

Q7XBQ9 Disease resistance protein RGA26.7e-0934.19Show/hide
Query:  SNAEH-NWISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQMDF-----QLQRLLTQLHIML---------
        S+A+H + +  L    LGKTTLAQ ++ND+R T+ F  K+W+C+SE+FD K +++ I+E +   +P + +MD      +LQ LL     +L         
Subjt:  SNAEH-NWISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQMDF-----QLQRLLTQLHIML---------

Query:  KENWMTKEIVVKEPSSG
        ++ W     V+K  +SG
Subjt:  KENWMTKEIVVKEPSSG

Q9LRR4 Putative disease resistance RPP13-like protein 13.4e-0539.39Show/hide
Query:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQMDFQLQRLLTQL
        +GKTTL+Q +YND+     F  K+W  +SEEFDV  I +K+ E  T +  E   +D    +L  +L
Subjt:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQMDFQLQRLLTQL

Arabidopsis top hitse value%identityAlignment
AT1G58390.1 Disease resistance protein (CC-NBS-LRR class) family9.3e-0643.1Show/hide
Query:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFAT--RKKPEIHQMD
        LGKTTLA+ ++N E    +F+   WVC+S+EF  K + + I++  T   KK EI QM+
Subjt:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFAT--RKKPEIHQMD

AT1G58400.1 Disease resistance protein (CC-NBS-LRR class) family2.7e-0541.38Show/hide
Query:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRK--KPEIHQMD
        LGKTTLA+ ++N E    +F+   WVC+S+EF  K + + I++  T +  K EI QM+
Subjt:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRK--KPEIHQMD

AT1G58602.1 LRR and NB-ARC domains-containing disease resistance protein1.6e-0532.97Show/hide
Query:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIM--------EFATRKKPEIHQMDFQLQRLLTQLHIMLKENWMTKEIVVKE
        LGKTTLA+ ++N +  TK+F+   WV +S++F +K + + I+        E    +K  +   ++ LQR L QL  M K   +  +I  KE
Subjt:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIM--------EFATRKKPEIHQMDFQLQRLLTQLHIMLKENWMTKEIVVKE

AT1G58602.2 LRR and NB-ARC domains-containing disease resistance protein1.6e-0532.97Show/hide
Query:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIM--------EFATRKKPEIHQMDFQLQRLLTQLHIMLKENWMTKEIVVKE
        LGKTTLA+ ++N +  TK+F+   WV +S++F +K + + I+        E    +K  +   ++ LQR L QL  M K   +  +I  KE
Subjt:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIM--------EFATRKKPEIHQMDFQLQRLLTQLHIMLKENWMTKEIVVKE

AT3G14470.1 NB-ARC domain-containing disease resistance protein2.4e-0639.39Show/hide
Query:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQMDFQLQRLLTQL
        +GKTTL+Q +YND+     F  K+W  +SEEFDV  I +K+ E  T +  E   +D    +L  +L
Subjt:  LGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEKIMEFATRKKPEIHQMDFQLQRLLTQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACATAGGTGTATCAGTCCATCAAATTTTCAATTCGCACTTGAGATTTTGAAGAATACGAATAAATTTGTAATGGTTTTGGATGATGAGCTTGACAAGCTCAAACA
TACTATTTCAGCCATGAAAGCTGTGCTTCTTGATGCAGAGGAGCCACAGTCCAAGAGCAATGCAGAACATAATTGGATTTCAAGGTTAGAACGGGAGGATTTAGGTAAGA
CGACACTTGCTCAATCAATCTACAATGATGAACGCACCACGAAACGTTTTGAGTTGAAACTATGGGTGTGTATTTCTGAAGAGTTTGATGTAAAGGTTATTGTTGAAAAG
ATTATGGAGTTTGCAACAAGAAAGAAACCTGAGATTCATCAAATGGATTTCCAGTTGCAAAGACTTTTGACACAACTTCATATTATGCTCAAGGAGAATTGGATGACAAA
AGAGATTGTGGTTAAAGAGCCTTCCTCCGGCAATAAGAACGATAAGATGTCTTTTGTATGCCAAAAAACCAGAACATCATATTTGATTATAATATTCAAAAGGATACACT
TATTAAGCAATGGGTGGCACAAGGTTTCGTTTAATCATGTGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACATAGGTGTATCAGTCCATCAAATTTTCAATTCGCACTTGAGATTTTGAAGAATACGAATAAATTTGTAATGGTTTTGGATGATGAGCTTGACAAGCTCAAACA
TACTATTTCAGCCATGAAAGCTGTGCTTCTTGATGCAGAGGAGCCACAGTCCAAGAGCAATGCAGAACATAATTGGATTTCAAGGTTAGAACGGGAGGATTTAGGTAAGA
CGACACTTGCTCAATCAATCTACAATGATGAACGCACCACGAAACGTTTTGAGTTGAAACTATGGGTGTGTATTTCTGAAGAGTTTGATGTAAAGGTTATTGTTGAAAAG
ATTATGGAGTTTGCAACAAGAAAGAAACCTGAGATTCATCAAATGGATTTCCAGTTGCAAAGACTTTTGACACAACTTCATATTATGCTCAAGGAGAATTGGATGACAAA
AGAGATTGTGGTTAAAGAGCCTTCCTCCGGCAATAAGAACGATAAGATGTCTTTTGTATGCCAAAAAACCAGAACATCATATTTGATTATAATATTCAAAAGGATACACT
TATTAAGCAATGGGTGGCACAAGGTTTCGTTTAATCATGTGACATAA
Protein sequenceShow/hide protein sequence
MKHRCISPSNFQFALEILKNTNKFVMVLDDELDKLKHTISAMKAVLLDAEEPQSKSNAEHNWISRLEREDLGKTTLAQSIYNDERTTKRFELKLWVCISEEFDVKVIVEK
IMEFATRKKPEIHQMDFQLQRLLTQLHIMLKENWMTKEIVVKEPSSGNKNDKMSFVCQKTRTSYLIIIFKRIHLLSNGWHKVSFNHVT