; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G013220 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G013220
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontranscription termination factor MTEF1, chloroplastic
Genome locationCmo_Chr11:9147830..9148654
RNA-Seq ExpressionCmoCh11G013220
SyntenyCmoCh11G013220
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0032502 - developmental process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588628.1 Transcription termination factor MTEF1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]7.5e-14996.76Show/hide
Query:  MAVGALSRPFTTISSLSHSNTPTSR----PPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSP
        MA GALSRPFTTISSLSHSNTPTSR    PPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSIL TVHFLKSKGFSDSDFP+LA LCPQLFSP
Subjt:  MAVGALSRPFTTISSLSHSNTPTSR----PPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSP

Query:  DFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRR
        DF+PTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRR
Subjt:  DFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRR

Query:  MPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
        MPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
Subjt:  MPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK

KAG7022425.1 Transcription termination factor MTEF1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-15198.91Show/hide
Query:  MAVGALSRPFTTISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDP
        MAVGALSRPFTTISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFP+LA LCPQLFSPDF+P
Subjt:  MAVGALSRPFTTISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDP

Query:  TDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRRMPAI
        TDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRRMPAI
Subjt:  TDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRRMPAI

Query:  FGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
        FGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
Subjt:  FGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK

XP_022931610.1 transcription termination factor MTEF1, chloroplastic [Cucurbita moschata]8.5e-153100Show/hide
Query:  MAVGALSRPFTTISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDP
        MAVGALSRPFTTISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDP
Subjt:  MAVGALSRPFTTISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDP

Query:  TDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRRMPAI
        TDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRRMPAI
Subjt:  TDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRRMPAI

Query:  FGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
        FGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
Subjt:  FGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK

XP_022988882.1 transcription termination factor MTEF1, chloroplastic [Cucurbita maxima]2.1e-14392.88Show/hide
Query:  MAVGALSRPFTTISSLSHSNTPTSRP-------PPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQL
        MAVGALS PFTTISSLSHSN+PTSRP       PPPFLNFRTAH HNLRYLKSL LLDS STKFRSPDAVHSILATVHFLKSKGFSDSDFP+LA LCPQL
Subjt:  MAVGALSRPFTTISSLSHSNTPTSRP-------PPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQL

Query:  FSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKV
        FSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCP+LLFSDVELCLRPTLRFLKQIG+ENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKV
Subjt:  FSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKV

Query:  CRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
        CRRMPA+FGYSVEENLRPKYEYLVNEMERD+EELKEFP YFAFSLERRIAPRHLHLKQRNLRIPL+RMLLWSDQKFYTKWK
Subjt:  CRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK

XP_023530124.1 transcription termination factor MTEF1, chloroplastic [Cucurbita pepo subsp. pepo]1.7e-14594.96Show/hide
Query:  MAVGALSRPFTTISSLSHSNTPTSR----PPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSP
        MAVGALSRPFTTISSLSHS+TPTSR    PPPPFLNFRTAHYHNLRYLKSL LLDS STK RSPDAVHSILATVHFLKSKGFSDSDFP+LA LCPQLFSP
Subjt:  MAVGALSRPFTTISSLSHSNTPTSR----PPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSP

Query:  DFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRR
        DF+PTDIAPVFDFLAADLSASIQESRGMILRCP+LLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRR
Subjt:  DFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRR

Query:  MPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
        MPA+FGYSVEENLRPKYEYLVNEMERDVEELKEFP YFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
Subjt:  MPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK

TrEMBL top hitse value%identityAlignment
A0A0A0K870 Uncharacterized protein3.4e-10771.38Show/hide
Query:  MAVG--ALSRPFTTISSLSHSNTPT----SRPP---PPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCP
        MAVG   LS  F  + S SH  TPT    SR P   PP +NFRT+H+ N+RYLKSL+++D + T+F SPDAVH IL TVHFLKSKGFSDSDFP LA LCP
Subjt:  MAVG--ALSRPFTTISSLSHSNTPT----SRPP---PPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCP

Query:  QLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAA
         LF+ +FD TDIAPVF FLA D+SAS+QESRG+ILRCP++LFSDVELCL+PT RFLKQ+GIENL +PSNL SHLLNTRVEKLR K RF QE+GFSHEEA+
Subjt:  QLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAA

Query:  KVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
        KVC RMPA+FGYSV+ENL+PKYEY V EMERD+EELK FP YF FSLE RI PRHLHLKQR L IPL+ MLLWS  +FY+KWK
Subjt:  KVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK

A0A1S3BZK0 transcription termination factor MTEF1, chloroplastic4.1e-10873.5Show/hide
Query:  MAVGA--LSRPFTTISSLSHSNTPT----SRPP---PPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCP
        MAVGA  LS  F  +SS SH  TPT    SR P   PP +NFRT+H  NLRYLKSL+++D + T+FRSPDAV  IL TVHFLKSKGFSDSDFP LA  CP
Subjt:  MAVGA--LSRPFTTISSLSHSNTPT----SRPP---PPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCP

Query:  QLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAA
         LF+ +FD TDIAPVF FLAAD+SASIQESRG+ILRCP++LFSDVELCL+PT RFLKQ+GIENL +PSNL SHLLNTRVEKLR K RFLQE+GFS+EEA+
Subjt:  QLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAA

Query:  KVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
        KVC RMPAIFGYSV+ENLRPKYEYLV  MERD+EELK FP YF FSLE RI PRHLHLKQR L IPL+ MLLWS  +FY+KWK
Subjt:  KVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK

A0A5D3C479 Transcription termination factor MTEF14.1e-10873.5Show/hide
Query:  MAVGA--LSRPFTTISSLSHSNTPT----SRPP---PPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCP
        MAVGA  LS  F  +SS SH  TPT    SR P   PP +NFRT+H  NLRYLKSL+++D + T+FRSPDAV  IL TVHFLKSKGFSDSDFP LA  CP
Subjt:  MAVGA--LSRPFTTISSLSHSNTPT----SRPP---PPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCP

Query:  QLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAA
         LF+ +FD TDIAPVF FLAAD+SASIQESRG+ILRCP++LFSDVELCL+PT RFLKQ+GIENL +PSNL SHLLNTRVEKLR K RFLQE+GFS+EEA+
Subjt:  QLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAA

Query:  KVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
        KVC RMPAIFGYSV+ENLRPKYEYLV  MERD+EELK FP YF FSLE RI PRHLHLKQR L IPL+ MLLWS  +FY+KWK
Subjt:  KVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK

A0A6J1EZY9 transcription termination factor MTEF1, chloroplastic4.1e-153100Show/hide
Query:  MAVGALSRPFTTISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDP
        MAVGALSRPFTTISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDP
Subjt:  MAVGALSRPFTTISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDP

Query:  TDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRRMPAI
        TDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRRMPAI
Subjt:  TDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRRMPAI

Query:  FGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
        FGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
Subjt:  FGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK

A0A6J1JEA2 transcription termination factor MTEF1, chloroplastic1.0e-14392.88Show/hide
Query:  MAVGALSRPFTTISSLSHSNTPTSRP-------PPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQL
        MAVGALS PFTTISSLSHSN+PTSRP       PPPFLNFRTAH HNLRYLKSL LLDS STKFRSPDAVHSILATVHFLKSKGFSDSDFP+LA LCPQL
Subjt:  MAVGALSRPFTTISSLSHSNTPTSRP-------PPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQL

Query:  FSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKV
        FSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCP+LLFSDVELCLRPTLRFLKQIG+ENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKV
Subjt:  FSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKV

Query:  CRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
        CRRMPA+FGYSVEENLRPKYEYLVNEMERD+EELKEFP YFAFSLERRIAPRHLHLKQRNLRIPL+RMLLWSDQKFYTKWK
Subjt:  CRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK

SwissProt top hitse value%identityAlignment
F4IHL3 Transcription termination factor MTERF2, chloroplastic1.6e-1329.44Show/hide
Query:  GFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRF-LKQIGI--ENLNTPSNLKSHLLNTRV-EK
        G        + ++ P L+  D + T IAP   FL  ++    +    M+++ P LL + +   +RP + F L + G+  +++     +   LL   +  K
Subjt:  GFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRF-LKQIGI--ENLNTPSNLKSHLLNTRV-EK

Query:  LRGKFRFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKF
        L    R+   LG    +  ++    P +  Y+V +NLRPKY YL   M R +++L EFP +F++SLERRI PRH  + +  +   L  ML  +D++F
Subjt:  LRGKFRFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKF

F4JVI3 Transcription termination factor MTERF5, chloroplastic2.0e-1125.25Show/hide
Query:  TVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSASIQESRGMIL-RCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLN
        T+ FL++ G   + +  +    P + +  +    +    +FL+   +   +E  G IL RCP ++   VE  LRPT+ + + + ++              
Subjt:  TVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSASIQESRGMIL-RCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLN

Query:  TRVEKLRGKFRFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQ
        +    L+    F  E GF  +E   +  R  A++ +S++EN+ PK++Y    M+    EL +FP +F +SL+ RI PR+  +++  +R+ L+++L  S  
Subjt:  TRVEKLRGKFRFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQ

Query:  KF
        +F
Subjt:  KF

Q84X53 Transcription termination factor MTEF1, chloroplastic3.7e-3442.58Show/hide
Query:  VHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLK
        + S+++    L S G S      +  + P L + D   ++I PV  FL+ ++S S Q+    I RCPRLL S V+  LRP L FLK +G    +T ++  
Subjt:  VHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLK

Query:  SHLLNTRVEK-LRGKFRFLQE-LGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHR
        + LL + VE+ L  K  +L+E LGF+ EE AK+  R PA+  YSV+ NL PK E+ + EM  DV+ELK FP YF+FSLER+I PRH  LK+  + +PL  
Subjt:  SHLLNTRVEK-LRGKFRFLQE-LGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHR

Query:  MLLWSDQKF
        ML  SD +F
Subjt:  MLLWSDQKF

Q9FM80 Transcription termination factor MTERF9, chloroplastic2.5e-1426.61Show/hide
Query:  HSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFL-KQIGIENLNTPSNLK
        +++ A + FL   G  +S    +    P LFS   +   + P   +L  ++     +   ++   P++L   +++       FL K++G    +    +K
Subjt:  HSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFL-KQIGIENLNTPSNLK

Query:  SH--LLNTRVEK-LRGKFRFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHL----KQRNLR
         H  LL+  ++     +  FL+ +G  + +  KV   +  +   S+E+NL+PKY YLVNE+  +V  L ++P Y + SL++RI PRH  L    K R   
Subjt:  SH--LLNTRVEK-LRGKFRFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHL----KQRNLR

Query:  IPLHRMLLWSDQKFYTKW
         PL   L+ +D+ F  +W
Subjt:  IPLHRMLLWSDQKFYTKW

Q9SZL6 Transcription termination factor MTERF6, chloroplastic/mitochondrial2.0e-1127.47Show/hide
Query:  SRSTKFRSPDAVHSI----LATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAA---DLSASIQESRGMILRCPRLLFSDVELCLRPTL
        S  TKF  P   HS+       + F ++ G  ++    + +  P+L S   D T +  +  FLA+   D    I +   ++++ P L+   V+  LRPT 
Subjt:  SRSTKFRSPDAVHSI----LATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAA---DLSASIQESRGMILRCPRLLFSDVELCLRPTL

Query:  RFLK-QIGIENLNTPSNLKS--HLLNTRVEK-LRGKFRFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLER
         FLK  +G+      S + +   LL   V K L+  + +L+E GF   + A +    P I   SV+ +L+P+  +LV  M R ++E+  +P +F   L++
Subjt:  RFLK-QIGIENLNTPSNLKS--HLLNTRVEK-LRGKFRFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLER

Query:  RIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKW
        ++  R   +K+ N+   L  ML  + +KF+ K+
Subjt:  RIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKW

Arabidopsis top hitse value%identityAlignment
AT2G03050.1 Mitochondrial transcription termination factor family protein2.7e-3542.58Show/hide
Query:  VHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLK
        + S+++    L S G S      +  + P L + D   ++I PV  FL+ ++S S Q+    I RCPRLL S V+  LRP L FLK +G    +T ++  
Subjt:  VHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLK

Query:  SHLLNTRVEK-LRGKFRFLQE-LGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHR
        + LL + VE+ L  K  +L+E LGF+ EE AK+  R PA+  YSV+ NL PK E+ + EM  DV+ELK FP YF+FSLER+I PRH  LK+  + +PL  
Subjt:  SHLLNTRVEK-LRGKFRFLQE-LGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHR

Query:  MLLWSDQKF
        ML  SD +F
Subjt:  MLLWSDQKF

AT2G34620.1 Mitochondrial transcription termination factor family protein8.0e-4043.2Show/hide
Query:  SILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSH
        SI + +HFL+SKG   +D P +  +CP++ + D   T++ PVF FL+ DL       R +I +CPRLL S VE  L+P L +L+++G+++L   +     
Subjt:  SILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSH

Query:  LLNTRVE-KLRGKFRFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLL
        LL + VE  L  K RFL+ +GFS  EA  +  R PA+F +S+E N +PK +Y ++E++  +E LKEFP YFAFSLE+RI PRHL   +R L +PL  ML 
Subjt:  LLNTRVE-KLRGKFRFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLL

Query:  WSDQKF
         +D++F
Subjt:  WSDQKF

AT2G36000.1 Mitochondrial transcription termination factor family protein9.1e-2835.47Show/hide
Query:  ISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSK------GFSDSDFPSLAILCPQLFSPDFDPTDIAPV
        I SLS + T T+          ++ +  L YL SL  +D  +   R P  + + L+ V  +          F+  DF  L  +CP+L +       I PV
Subjt:  ISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSK------GFSDSDFPSLAILCPQLFSPDFDPTDIAPV

Query:  FDFLAADLSA-SIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVE-KLRGKFRFLQELGFSHEEAAKVCRRMPAIFGYS
          FL  ++   SI + R  + R PRLL   V+  LRPTL FL++IGI       +  ++LL+  V+ KL  +  + ++LGFS   A  + +R P +F YS
Subjt:  FDFLAADLSA-SIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVE-KLRGKFRFLQELGFSHEEAAKVCRRMPAIFGYS

Query:  VEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKF
        + EN  PK +YL+ EM RDV E+ EFP YF+FSLE RI PRH     + +R PL  ML  ++  F
Subjt:  VEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKF

AT2G36000.2 Mitochondrial transcription termination factor family protein9.1e-2835.47Show/hide
Query:  ISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSK------GFSDSDFPSLAILCPQLFSPDFDPTDIAPV
        I SLS + T T+          ++ +  L YL SL  +D  +   R P  + + L+ V  +          F+  DF  L  +CP+L +       I PV
Subjt:  ISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSK------GFSDSDFPSLAILCPQLFSPDFDPTDIAPV

Query:  FDFLAADLSA-SIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVE-KLRGKFRFLQELGFSHEEAAKVCRRMPAIFGYS
          FL  ++   SI + R  + R PRLL   V+  LRPTL FL++IGI       +  ++LL+  V+ KL  +  + ++LGFS   A  + +R P +F YS
Subjt:  FDFLAADLSA-SIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVE-KLRGKFRFLQELGFSHEEAAKVCRRMPAIFGYS

Query:  VEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKF
        + EN  PK +YL+ EM RDV E+ EFP YF+FSLE RI PRH     + +R PL  ML  ++  F
Subjt:  VEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKF

AT3G18870.1 Mitochondrial transcription termination factor family protein2.5e-8657.66Show/hide
Query:  MAVGALSRPFTTISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDP
        MAV A       +SS S   +P+S   P +L F+T+H  NLR+L SL ++          + +  IL+ V+ LKSKG SD DFP L  LCPQLFSP FD 
Subjt:  MAVGALSRPFTTISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDP

Query:  TDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRRMPAI
        + + PVFDFL  +L AS +ESRG+I+ CP +LFSDVE CLRPTL +LK++G+ NLN  S   +H+LNTRVEKLR K RFL+ +GF HEEAA+VC R+PAI
Subjt:  TDIAPVFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRRMPAI

Query:  FGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK
        FGYSVE+NLRPK+E+LV +MER++EELK+FP YFAFSL +RI PRH HLK++N+R+ L RML+W DQKFY+KWK
Subjt:  FGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTGGAGCTCTCTCTCGCCCATTCACCACCATCTCTTCCCTCTCTCATTCCAACACTCCCACCTCTAGGCCTCCTCCTCCATTCCTCAACTTCCGCACT
GCACATTACCACAACCTCCGTTACCTCAAATCCCTCCACCTCCTCGATTCCCGTAGTACCAAGTTTCGATCTCCCGACGCCGTCCATAGTATCCTTGCCACCGTC
CATTTCCTCAAGTCCAAGGGCTTCTCCGACTCCGACTTCCCCTCACTCGCTATCCTCTGCCCCCAACTCTTCTCTCCCGACTTCGATCCTACCGACATTGCTCCT
GTCTTCGACTTCTTGGCTGCCGATCTATCCGCTTCCATCCAAGAATCACGTGGCATGATCCTCCGCTGCCCTAGGCTTCTCTTCTCCGACGTCGAGTTGTGTCTC
CGACCAACGCTCAGATTCCTGAAGCAAATAGGGATCGAGAATCTGAACACGCCCAGCAATCTGAAATCGCACCTGTTGAATACTCGGGTGGAGAAGCTGAGAGGC
AAATTCAGATTCTTGCAGGAGTTGGGATTCTCCCACGAGGAGGCAGCAAAGGTATGCAGGAGAATGCCGGCGATATTCGGGTACAGTGTAGAGGAGAATTTGAGG
CCAAAGTATGAGTATTTGGTGAATGAAATGGAGAGAGATGTGGAGGAACTGAAAGAGTTCCCGCACTACTTTGCATTCAGTTTGGAGAGACGAATAGCGCCAAGG
CATTTGCACCTCAAACAAAGGAACCTTAGAATTCCACTCCACAGAATGCTCTTGTGGAGTGACCAAAAATTTTACACCAAATGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTGGAGCTCTCTCTCGCCCATTCACCACCATCTCTTCCCTCTCTCATTCCAACACTCCCACCTCTAGGCCTCCTCCTCCATTCCTCAACTTCCGCACT
GCACATTACCACAACCTCCGTTACCTCAAATCCCTCCACCTCCTCGATTCCCGTAGTACCAAGTTTCGATCTCCCGACGCCGTCCATAGTATCCTTGCCACCGTC
CATTTCCTCAAGTCCAAGGGCTTCTCCGACTCCGACTTCCCCTCACTCGCTATCCTCTGCCCCCAACTCTTCTCTCCCGACTTCGATCCTACCGACATTGCTCCT
GTCTTCGACTTCTTGGCTGCCGATCTATCCGCTTCCATCCAAGAATCACGTGGCATGATCCTCCGCTGCCCTAGGCTTCTCTTCTCCGACGTCGAGTTGTGTCTC
CGACCAACGCTCAGATTCCTGAAGCAAATAGGGATCGAGAATCTGAACACGCCCAGCAATCTGAAATCGCACCTGTTGAATACTCGGGTGGAGAAGCTGAGAGGC
AAATTCAGATTCTTGCAGGAGTTGGGATTCTCCCACGAGGAGGCAGCAAAGGTATGCAGGAGAATGCCGGCGATATTCGGGTACAGTGTAGAGGAGAATTTGAGG
CCAAAGTATGAGTATTTGGTGAATGAAATGGAGAGAGATGTGGAGGAACTGAAAGAGTTCCCGCACTACTTTGCATTCAGTTTGGAGAGACGAATAGCGCCAAGG
CATTTGCACCTCAAACAAAGGAACCTTAGAATTCCACTCCACAGAATGCTCTTGTGGAGTGACCAAAAATTTTACACCAAATGGAAATGA
Protein sequenceShow/hide protein sequence
MAVGALSRPFTTISSLSHSNTPTSRPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTKFRSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAP
VFDFLAADLSASIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKFRFLQELGFSHEEAAKVCRRMPAIFGYSVEENLR
PKYEYLVNEMERDVEELKEFPHYFAFSLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK