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CmoCh11G013310 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G013310
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpentatricopeptide repeat-containing protein At2g15630, mitochondrial
Genome locationCmo_Chr11:9195002..9196400
RNA-Seq ExpressionCmoCh11G013310
SyntenyCmoCh11G013310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_002269015.2 PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Vitis vinifera]3.1e-0672.22Show/hide
Query:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINRL
        A E+F+CFYMMKEKGI P+ ETCND LSLFL +NR+
Subjt:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINRL

XP_022972339.1 pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Cucurbita maxima]8.2e-0777.14Show/hide
Query:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINR
        A E+FECFYMMKEKG+AP+ ETCND LSLFL +NR
Subjt:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINR

XP_023554102.1 pentatricopeptide repeat-containing protein At2g15630, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]8.2e-0777.14Show/hide
Query:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINR
        A E+FECFYMMKEKG+AP+ ETCND LSLFL +NR
Subjt:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINR

XP_023554103.1 pentatricopeptide repeat-containing protein At2g15630, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]8.2e-0777.14Show/hide
Query:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINR
        A E+FECFYMMKEKG+AP+ ETCND LSLFL +NR
Subjt:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINR

XP_034702516.1 pentatricopeptide repeat-containing protein At2g15630, mitochondrial-like [Vitis riparia]3.1e-0672.22Show/hide
Query:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINRL
        A E+F+CFYMMKEKGI P+ ETCND LSLFL +NR+
Subjt:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINRL

TrEMBL top hitse value%identityAlignment
A0A438GRM0 Pentatricopeptide repeat-containing protein, mitochondrial1.5e-0672.22Show/hide
Query:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINRL
        A E+F+CFYMMKEKGI P+ ETCND LSLFL +NR+
Subjt:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINRL

A0A6J1C2M0 pentatricopeptide repeat-containing protein At2g15630, mitochondrial1.5e-0674.29Show/hide
Query:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINR
        A E FECFYMMKEKG+AP+ ETCN+ LSLFL +NR
Subjt:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINR

A0A6J1GND9 pentatricopeptide repeat-containing protein At2g15630, mitochondrial1.5e-0674.29Show/hide
Query:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINR
        A E+FECFYMMKE G+AP+ ETCND LSLFL +NR
Subjt:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINR

A0A6J1IB79 pentatricopeptide repeat-containing protein At2g15630, mitochondrial4.0e-0777.14Show/hide
Query:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINR
        A E+FECFYMMKEKG+AP+ ETCND LSLFL +NR
Subjt:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINR

D7STD9 Uncharacterized protein1.5e-0672.22Show/hide
Query:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINRL
        A E+F+CFYMMKEKGI P+ ETCND LSLFL +NR+
Subjt:  AAESFECFYMMKEKGIAPRNETCNDFLSLFLMINRL

SwissProt top hitse value%identityAlignment
Q9ZQF1 Pentatricopeptide repeat-containing protein At2g15630, mitochondrial2.1e-0555.88Show/hide
Query:  ESFECFYMMKEKGIAPRNETCNDFLSLFLMINRL
        E+ ECFY+MKEKG  P+ ETCN  L+L   +NR+
Subjt:  ESFECFYMMKEKGIAPRNETCNDFLSLFLMINRL

Arabidopsis top hitse value%identityAlignment
AT2G15630.1 Pentatricopeptide repeat (PPR) superfamily protein1.5e-0655.88Show/hide
Query:  ESFECFYMMKEKGIAPRNETCNDFLSLFLMINRL
        E+ ECFY+MKEKG  P+ ETCN  L+L   +NR+
Subjt:  ESFECFYMMKEKGIAPRNETCNDFLSLFLMINRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCACCACGACAGCTGCACTTGCTGCAGATGAAATTTTGTCAGCCAAATTCTGAGATTAGCTTGTTTCTTGGAAGTTCGGTTGAATTAGATGTTGAAAGCAATTC
AAGCGCAGCTGAATCTTTCGAGTGTTTTTACATGATGAAGGAAAAAGGAATTGCACCCAGGAATGAAACCTGCAATGATTTCCTGAGTTTGTTTCTGATGATCAACAGAT
TGGGAGGTGAAGTTGAAGAAGGCCAAGGATTTTATTGGGCATATGTAGAGCTTAGGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTCACCACGACAGCTGCACTTGCTGCAGATGAAATTTTGTCAGCCAAATTCTGAGATTAGCTTGTTTCTTGGAAGTTCGGTTGAATTAGATGTTGAAAGCAATTC
AAGCGCAGCTGAATCTTTCGAGTGTTTTTACATGATGAAGGAAAAAGGAATTGCACCCAGGAATGAAACCTGCAATGATTTCCTGAGTTTGTTTCTGATGATCAACAGAT
TGGGAGGTGAAGTTGAAGAAGGCCAAGGATTTTATTGGGCATATGTAGAGCTTAGGGCTTAA
Protein sequenceShow/hide protein sequence
MVSPRQLHLLQMKFCQPNSEISLFLGSSVELDVESNSSAAESFECFYMMKEKGIAPRNETCNDFLSLFLMINRLGGEVEEGQGFYWAYVELRA