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CmoCh11G013630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G013630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontranscription factor bHLH95-like
Genome locationCmo_Chr11:9532279..9533029
RNA-Seq ExpressionCmoCh11G013630
SyntenyCmoCh11G013630
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009960 - endosperm development (biological process)
GO:0016020 - membrane (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR044278 - Transcription factor BHLH95-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588663.1 Transcription factor basic helix-loop-helix 95, partial [Cucurbita argyrosperma subsp. sororia]6.7e-3764.14Show/hide
Query:  QQSSSTTTTEAFLANQASSSNDLSSTLLP------PPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHISS
        Q SS+TTT +AFLA+QASSSN +SSTLLP      PP  P FS  TT FQTWTSS+L L +CGG  HFCICS KK GLF AVCY+LDKHQIEVVSAH+SS
Subjt:  QQSSSTTTTEAFLANQASSSNDLSSTLLP------PPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHISS

Query:  DFHRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA
        DFHR FFMIQ H+     S+D+           AMVAEEMFKQ A
Subjt:  DFHRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA

KAG7022449.1 Transcription factor bHLH95, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-3764.14Show/hide
Query:  QQSSSTTTTEAFLANQASSSNDLSSTLLP------PPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHISS
        Q SS+TTT +AFLA+QASSSN +SSTLLP      PP  P FS  TT FQTWTSS+L L +CGG  HFCICS KK GLF AVCY+LDKHQIEVVSAH+SS
Subjt:  QQSSSTTTTEAFLANQASSSNDLSSTLLP------PPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHISS

Query:  DFHRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA
        DFHR FFMIQ H+     S+D+           AMVAEEMFKQ A
Subjt:  DFHRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA

XP_022927859.1 transcription factor bHLH95-like [Cucurbita moschata]6.1e-3865.73Show/hide
Query:  QQSSSTTTT-EAFLANQASSSNDLSSTLLP---PPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHISSDF
        QQSSSTTTT +AFL +QASSSN +SSTLLP   PP  P FS  TT FQTWTSS+L L +CGG  HFCICS KK GLF AVCY+LDKHQIEVVSAH+SSDF
Subjt:  QQSSSTTTT-EAFLANQASSSNDLSSTLLP---PPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHISSDF

Query:  HRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA
        HR FFMIQ H+  +   F             AMVAEEMFKQ A
Subjt:  HRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA

XP_022988868.1 transcription factor bHLH95-like [Cucurbita maxima]2.2e-4069.23Show/hide
Query:  QQSSSTTTT-EAFLANQASSSNDLSSTLLPPPPS---PSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHISSDF
        QQSSSTTTT +AFLA+QASSSN +SSTLLPPP S   P F   TTAFQTWTSSNL L +CGG  HFCICS KKPGLF AVCY++DKHQIEVVSAH+SSDF
Subjt:  QQSSSTTTT-EAFLANQASSSNDLSSTLLPPPPS---PSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHISSDF

Query:  HRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA
        HRMF MIQAH+     S+D+           AMVAEEMFKQ A
Subjt:  HRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA

XP_023531698.1 transcription factor bHLH95-like [Cucurbita pepo subsp. pepo]1.4e-3967.36Show/hide
Query:  QQSSSTTTT-EAFLANQASSSNDLSSTLLPPPP----SPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHISSD
        QQS+STTTT +AFLA+QASSSN +SSTLLPPPP     P FS  TT FQTWTSSNL L +CGG  HFCICS KK GLF AVCY+LDKHQIEVVSAH+SSD
Subjt:  QQSSSTTTT-EAFLANQASSSNDLSSTLLPPPP----SPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHISSD

Query:  FHRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA
        FHR FFMIQ H+     S+D+           AMVAEEMFKQ A
Subjt:  FHRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA

TrEMBL top hitse value%identityAlignment
A0A1S4E152 transcription factor bHLH95-like9.4e-2959.66Show/hide
Query:  TTTEAFLANQASSSNDLSS------------------TLLPPPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVV
        TT EAFLA+QASS++D+SS                  ++LPPPP PS     +AFQTWTSSNL L VCG + HFC+CS KKPGLF A+CYVLDKH+I+VV
Subjt:  TTTEAFLANQASSSNDLSS------------------TLLPPPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVV

Query:  SAHISSDFHRMFFMIQAHL
        SAH+SSD H+ FFMIQAH+
Subjt:  SAHISSDFHRMFFMIQAHL

A0A5D3C5Y1 Transcription factor bHLH95-like1.1e-2951.66Show/hide
Query:  TTTEAFLANQASSSNDLSS------------------TLLPPPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVV
        TT EAFLA+QASS++D+SS                  ++LPPPP PS     +AFQTWTSSNL L VCG + HFC+CS KKPGLF A+CYVLDKH+I+VV
Subjt:  TTTEAFLANQASSSNDLSS------------------TLLPPPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVV

Query:  SAHISSDFHRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA
        SAH+SSD H+ FFMIQAH+      +++        +  A VAE+ FK+ A
Subjt:  SAHISSDFHRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA

A0A6J1EJ65 transcription factor bHLH95-like2.9e-3865.73Show/hide
Query:  QQSSSTTTT-EAFLANQASSSNDLSSTLLP---PPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHISSDF
        QQSSSTTTT +AFL +QASSSN +SSTLLP   PP  P FS  TT FQTWTSS+L L +CGG  HFCICS KK GLF AVCY+LDKHQIEVVSAH+SSDF
Subjt:  QQSSSTTTT-EAFLANQASSSNDLSSTLLP---PPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHISSDF

Query:  HRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA
        HR FFMIQ H+  +   F             AMVAEEMFKQ A
Subjt:  HRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA

A0A6J1I8N4 transcription factor bHLH95-like1.9e-2953.06Show/hide
Query:  QSSSTTTTEAFLANQASSSNDLSSTLLPPPPSPSFSGIT---------TAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHI
        +SS+ TT EAFLANQASS+ND+SSTL P   + + +G           ++FQTW SSNL L VCG + HFCICS KKPGLF  +CYVL+KHQI VVSAH+
Subjt:  QSSSTTTTEAFLANQASSSNDLSSTLLPPPPSPSFSGIT---------TAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHI

Query:  SSDFHRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA
        SSD+HR FFMI AH+      F+            A VAE+ FK+ A
Subjt:  SSDFHRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA

A0A6J1JNK3 transcription factor bHLH95-like1.1e-4069.23Show/hide
Query:  QQSSSTTTT-EAFLANQASSSNDLSSTLLPPPPS---PSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHISSDF
        QQSSSTTTT +AFLA+QASSSN +SSTLLPPP S   P F   TTAFQTWTSSNL L +CGG  HFCICS KKPGLF AVCY++DKHQIEVVSAH+SSDF
Subjt:  QQSSSTTTT-EAFLANQASSSNDLSSTLLPPPPS---PSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHISSDF

Query:  HRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA
        HRMF MIQAH+     S+D+           AMVAEEMFKQ A
Subjt:  HRMFFMIQAHLLFKMSSFDDACVWKLRWIRGAMVAEEMFKQVA

SwissProt top hitse value%identityAlignment
Q9FXA3 Transcription factor bHLH956.6e-1139.8Show/hide
Query:  AFLANQASSSNDLSSTLLPPPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGK-KPGLFTAVCYVLDKHQIEVVSAHISSDFHRMFFMIQAHL
        AFLA+Q SSS+  ++ L  P   P  +     F TW+S N+ L +CG    F +C  K KPG+FT+VCY+ +K+ +EV+ A++SS+     ++IQA +
Subjt:  AFLANQASSSNDLSSTLLPPPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGK-KPGLFTAVCYVLDKHQIEVVSAHISSDFHRMFFMIQAHL

Arabidopsis top hitse value%identityAlignment
AT1G49770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.7e-1239.8Show/hide
Query:  AFLANQASSSNDLSSTLLPPPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGK-KPGLFTAVCYVLDKHQIEVVSAHISSDFHRMFFMIQAHL
        AFLA+Q SSS+  ++ L  P   P  +     F TW+S N+ L +CG    F +C  K KPG+FT+VCY+ +K+ +EV+ A++SS+     ++IQA +
Subjt:  AFLANQASSSNDLSSTLLPPPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGK-KPGLFTAVCYVLDKHQIEVVSAHISSDFHRMFFMIQAHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAACAATCTAGTTCAACCACCACAACCGAGGCTTTCTTGGCCAACCAAGCTTCCTCCTCCAACGACTTGTCCTCCACTCTTCTTCCACCACCACCATCGCCTTCCTTCTC
TGGTATTACTACGGCGTTTCAGACTTGGACTTCCTCCAACCTCGAATTAAAGGTCTGTGGCGGCAACACCCATTTCTGCATCTGCTCCGGCAAGAAGCCTGGTTTGTTCA
CCGCCGTTTGTTATGTTCTTGATAAGCATCAGATTGAGGTTGTTTCGGCTCATATCTCCTCGGATTTCCATCGCATGTTCTTTATGATTCAAGCCCATTTGTTATTTAAA
ATGAGTTCTTTTGACGATGCATGCGTATGGAAGTTGCGATGGATTCGGGGCGCAATGGTGGCAGAAGAAATGTTCAAGCAAGTTGCG
mRNA sequenceShow/hide mRNA sequence
CAACAATCTAGTTCAACCACCACAACCGAGGCTTTCTTGGCCAACCAAGCTTCCTCCTCCAACGACTTGTCCTCCACTCTTCTTCCACCACCACCATCGCCTTCCTTCTC
TGGTATTACTACGGCGTTTCAGACTTGGACTTCCTCCAACCTCGAATTAAAGGTCTGTGGCGGCAACACCCATTTCTGCATCTGCTCCGGCAAGAAGCCTGGTTTGTTCA
CCGCCGTTTGTTATGTTCTTGATAAGCATCAGATTGAGGTTGTTTCGGCTCATATCTCCTCGGATTTCCATCGCATGTTCTTTATGATTCAAGCCCATTTGTTATTTAAA
ATGAGTTCTTTTGACGATGCATGCGTATGGAAGTTGCGATGGATTCGGGGCGCAATGGTGGCAGAAGAAATGTTCAAGCAAGTTGCG
Protein sequenceShow/hide protein sequence
QQSSSTTTTEAFLANQASSSNDLSSTLLPPPPSPSFSGITTAFQTWTSSNLELKVCGGNTHFCICSGKKPGLFTAVCYVLDKHQIEVVSAHISSDFHRMFFMIQAHLLFK
MSSFDDACVWKLRWIRGAMVAEEMFKQVA