; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G013830 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G013830
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein RALF-like 4
Genome locationCmo_Chr11:9662327..9662692
RNA-Seq ExpressionCmoCh11G013830
SyntenyCmoCh11G013830
Gene Ontology termsGO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588679.1 Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. sororia]4.3e-5696.61Show/hide
Query:  MKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI
        MKI LVLLLVF  VAPLSFAFHEASHSSSLLDDNS+YSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI
Subjt:  MKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRI

Query:  NPYRRGCAAITGCARFTD
        NPYRRGCAAITGCARFTD
Subjt:  NPYRRGCAAITGCARFTD

XP_022927736.1 rapid alkalinization factor 23-like [Cucurbita moschata]2.9e-60100Show/hide
Query:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR
        METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR
Subjt:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARFTD
        RRINPYRRGCAAITGCARFTD
Subjt:  RRINPYRRGCAAITGCARFTD

XP_022989014.1 protein RALF-like 4 [Cucurbita maxima]3.2e-5185.12Show/hide
Query:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR
        M TMK+Y+ LLLVF  V PLSFA HE S++SSL+DDNS+YSFFGGDSSEAMTEDSRRQLFQYGF YNKEARKR+LSYYAL +NNIPCGRRGTSYYDCKKR
Subjt:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARFTD
        R INPYRRGCAAITGCARFTD
Subjt:  RRINPYRRGCAAITGCARFTD

XP_022989015.1 protein RALF-like 4 [Cucurbita maxima]1.4e-5186.78Show/hide
Query:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR
        METMKI L LLLVF  VAP S AFHE S+ SSL+DDNS+YSFFGGDSSE+MTEDSRRQLFQYGF YN EARKRFL+YYALSKNNIPCGRRG+SYYDCKKR
Subjt:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARFTD
        RRINPYRRGCAAITGCARFTD
Subjt:  RRINPYRRGCAAITGCARFTD

XP_023530159.1 protein RALF-like 19 [Cucurbita pepo subsp. pepo]1.7e-5293.44Show/hide
Query:  METMKIYLVLLLVFTA-VAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKK
        METMKI LVLLLVF A VAPLSFAFHE SHSSSLL DNSQYSFFGGDSSEAMTEDSRRQLFQYGF YN EARKR LSYYALSKNNIPCGRRGTSYYDCKK
Subjt:  METMKIYLVLLLVFTA-VAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKK

Query:  RRRINPYRRGCAAITGCARFTD
        RRRINPYRRGCAAITGCARFTD
Subjt:  RRRINPYRRGCAAITGCARFTD

TrEMBL top hitse value%identityAlignment
A0A6J1EI16 protein RALF-like 198.5e-5082.64Show/hide
Query:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR
        M TMK+ + +LLVF    PLSFA HE S++SSL++DN+ YSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKR+LSYYAL +NNIPCGRRGTSYYDCKKR
Subjt:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARFTD
        RRINPYRRGCAAITGCARFTD
Subjt:  RRINPYRRGCAAITGCARFTD

A0A6J1EIG3 rapid alkalinization factor 23-like1.4e-60100Show/hide
Query:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR
        METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR
Subjt:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARFTD
        RRINPYRRGCAAITGCARFTD
Subjt:  RRINPYRRGCAAITGCARFTD

A0A6J1JIT9 protein RALF-like 41.5e-5186.99Show/hide
Query:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSS--EAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCK
        METMKI L LLLVF  VAPLSFAFHE SH SSL+DDNS+YSFFGG SS  EAMTEDSRRQLF+YGF YN+EARKRFL+YYALSKNNIPCGRRG SYYDCK
Subjt:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSS--EAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCK

Query:  KRRRINPYRRGCAAITGCARFTD
        KRRRINPYRRGCAAITGCARFTD
Subjt:  KRRRINPYRRGCAAITGCARFTD

A0A6J1JL71 protein RALF-like 46.9e-5286.78Show/hide
Query:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR
        METMKI L LLLVF  VAP S AFHE S+ SSL+DDNS+YSFFGGDSSE+MTEDSRRQLFQYGF YN EARKRFL+YYALSKNNIPCGRRG+SYYDCKKR
Subjt:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARFTD
        RRINPYRRGCAAITGCARFTD
Subjt:  RRINPYRRGCAAITGCARFTD

A0A6J1JN66 protein RALF-like 41.5e-5185.12Show/hide
Query:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR
        M TMK+Y+ LLLVF  V PLSFA HE S++SSL+DDNS+YSFFGGDSSEAMTEDSRRQLFQYGF YNKEARKR+LSYYAL +NNIPCGRRGTSYYDCKKR
Subjt:  METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKR

Query:  RRINPYRRGCAAITGCARFTD
        R INPYRRGCAAITGCARFTD
Subjt:  RRINPYRRGCAAITGCARFTD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 193.8e-1557.97Show/hide
Query:  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT
        +E +RRQL          AR+ ++SY AL KNN+PC RRG SYYDCKKR+R NPYRRGC+ IT C R T
Subjt:  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT

Q8L9P8 Protein RALF-like 338.2e-1053.06Show/hide
Query:  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR
        A  +++SY AL +N +PC RRG SYY+C++  + NPY RGC+AIT C R
Subjt:  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR

Q945T0 Rapid alkalinization factor9.7e-1159.57Show/hide
Query:  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGC
        A K+++SY AL KN++PC RRG SYY+CK   + NPY RGC+AIT C
Subjt:  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGC

Q9FZA0 Protein RALF-like 41.1e-1457.35Show/hide
Query:  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF
        +E +RRQL +          +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R+
Subjt:  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF

Q9LUS7 Rapid alkalinization factor 235.7e-1142.86Show/hide
Query:  SSLLDDNSQYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR
        S+ L D     + GG+  E    DS   RR L          A +R++SY AL +N IPC RRG SYY+C++  + NPY RGC+AIT C R
Subjt:  SSLLDDNSQYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 47.9e-1657.35Show/hide
Query:  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF
        +E +RRQL +          +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+AIT C R+
Subjt:  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF

AT2G33775.1 ralf-like 192.7e-1657.97Show/hide
Query:  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT
        +E +RRQL          AR+ ++SY AL KNN+PC RRG SYYDCKKR+R NPYRRGC+ IT C R T
Subjt:  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT

AT3G05490.1 ralf-like 221.3e-1037.8Show/hide
Query:  NSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR
        +S +S   G  +E + E+   + F         A+K+++SY A+ +N++PC RRG SYY+C++  + NPY RGC+ IT C R
Subjt:  NSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR

AT3G16570.1 rapid alkalinization factor 234.1e-1242.86Show/hide
Query:  SSLLDDNSQYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR
        S+ L D     + GG+  E    DS   RR L          A +R++SY AL +N IPC RRG SYY+C++  + NPY RGC+AIT C R
Subjt:  SSLLDDNSQYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR

AT4G15800.1 ralf-like 335.9e-1153.06Show/hide
Query:  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR
        A  +++SY AL +N +PC RRG SYY+C++  + NPY RGC+AIT C R
Subjt:  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACAATGAAGATCTACCTCGTTCTCCTCCTCGTCTTTACCGCTGTTGCTCCGCTCTCCTTTGCCTTCCATGAAGCCTCCCACAGTTCATCCCTCCTCGACGATAA
TTCTCAATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCCATGACTGAAGATAGTCGACGACAACTTTTCCAATATGGATTCGTCTATAATAAGGAAGCTCGCAAGAGGT
TTTTGAGCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATTAATCCTTATCGTCGCGGTTGC
GCCGCCATCACTGGATGTGCTCGGTTCACCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACAATGAAGATCTACCTCGTTCTCCTCCTCGTCTTTACCGCTGTTGCTCCGCTCTCCTTTGCCTTCCATGAAGCCTCCCACAGTTCATCCCTCCTCGACGATAA
TTCTCAATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCCATGACTGAAGATAGTCGACGACAACTTTTCCAATATGGATTCGTCTATAATAAGGAAGCTCGCAAGAGGT
TTTTGAGCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATTAATCCTTATCGTCGCGGTTGC
GCCGCCATCACTGGATGTGCTCGGTTCACCGATTAA
Protein sequenceShow/hide protein sequence
METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGC
AAITGCARFTD