| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7022471.1 DNA-directed RNA polymerases II, IV and V subunit 3 [Cucurbita argyrosperma subsp. argyrosperma] | 1.1e-170 | 92.73 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDT------------------------KGIIIVKLRRGQELRLRAIARKGIGK
FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDT +GIIIVKLRRGQELRLRAIARKGIGK
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDT------------------------KGIIIVKLRRGQELRLRAIARKGIGK
Query: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Subjt: DHAKWSPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGA
Query: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
Subjt: IKASQLILNAIDILKQKLDAVRLSDDTVEADDQFGELGAHMRGG
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| XP_004138895.1 DNA-directed RNA polymerases II, IV and V subunit 3 [Cucumis sativus] | 4.5e-169 | 96.25 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDSAAA GEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK +WVES PT+VFELD VTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| XP_008441761.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucumis melo] | 1.5e-169 | 96.25 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDSAAA GEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK +WVES PT+VFELDPVTHQV+VV+PEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| XP_022147788.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Momordica charantia] | 1.9e-167 | 95.31 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDV+SKDL SSDHTVVPVDF+DSAAA+GE LDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEE+ +WVES PT+VFE+DP THQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| XP_022927752.1 DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucurbita moschata] | 4.2e-175 | 100 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LHS1 RPOLD domain-containing protein | 2.2e-169 | 96.25 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDSAAA GEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK +WVES PT+VFELD VTHQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A1S3B3P9 LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like | 7.4e-170 | 96.25 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEG+SYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDV+SKDLYSSDHTVVPVDFSDSAAA GEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEK +WVES PT+VFELDPVTHQV+VV+PEAYTYDDEVIKKAEAMGKAGLVDITA+EDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A6J1D221 DNA-directed RNA polymerases II, IV and V subunit 3-like | 9.1e-168 | 95.31 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFEL DTD SMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDV+SKDL SSDHTVVPVDF+DSAAA+GE LDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEE+ +WVES PT+VFE+DP THQV+VVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A6J1ELW4 DNA-directed RNA polymerases II, IV and V subunit 3-like | 2.0e-175 | 100 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| A0A6J1JIE7 DNA-directed RNA polymerases II, IV and V subunit 3-like | 2.0e-175 | 100 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Subjt: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P97760 DNA-directed RNA polymerase II subunit RPB3 | 5.3e-48 | 40 | Show/hide |
Query: YQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Y P V+I EL ++ KF + +TD+++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+ + +++SRDC + C CSV
Subjt: YQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Query: EFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
EF L +C+ DQT V+S+DL S+ V+PV + + ++ I+IVKLR+GQELRLRA A+KG GK+HAKW+P A V F Y+P ++ +
Subjt: EFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
Query: LTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKL
+ W +S +++ E D YD K + F + VES G+++ ++L+A+ LK+KL
Subjt: LTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKL
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| Q39211 DNA-directed RNA polymerases II, IV and V subunit 3 | 5.9e-148 | 82.5 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+GA+YQRFPK+KIREL+DDYAKFEL +TDVSMANALRRVMI+EVPT+AIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L +KC +DQTLDV+S+DLYS+D TV PVDF+ ++ + ++ + KGIIIVKLRRGQEL+LRAIARKGIGKDHAKWSPAATVTFMYEP I INED
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M+TL+ EEK +ESSPTKVF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I+ K+DSFIFTVESTGA+KASQL+LNAID+LKQKLDAVRLS
Subjt: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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| Q39212 DNA-directed RNA polymerases IV and V subunit 3B | 5.2e-136 | 77.19 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFEL +TDVSMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L AKC +DQTLDV+S+DLYS+D TV PVDF+ S ++ ++ + KGIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP I INE+
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M TLT EEK +ESSPTKVF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I K DSF+FTVESTGA+KASQL+LNAIDILKQKLDA+RLS
Subjt: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
D+TVEADDQFGELGAHMR G
Subjt: DDTVEADDQFGELGAHMRGG
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| Q3T0Q3 DNA-directed RNA polymerase II subunit RPB3 | 1.8e-48 | 40.34 | Show/hide |
Query: YQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Y P V+I EL D+ KF + +TD+++AN++RRV IAEVP IAID V+I+ NSSVL+DEFIAHRLGLIPLTS+ + +++SRDC + C CSV
Subjt: YQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAM-SMRFSRDCDACDGDGQCEFCSV
Query: EFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
EF L +C+ DQT V+S+DL S+ V+PV + + ++ I+IVKLR+GQELRLRA A+KG GK+HAKW+P A V F Y+P ++ +
Subjt: EFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMET
Query: LTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKL
+ W +S +++ E D YD K + F + VES G+++ ++L+A+ LK+KL
Subjt: LTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKL
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| Q54DH7 DNA-directed RNA polymerase II subunit rpb3 | 9.3e-69 | 48.81 | Show/hide |
Query: RFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFH
R P+++I E+++D F L +TD+S+ANALRRVMIAEVPT+ IDLVE E N+SVL DEFIAHRLGLIPL S+ ++RDC D +C+ CSVE
Subjt: RFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFH
Query: LRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTL
L KC ++ DV+S DL S + V+PV +++ + + I IVKLRRGQE++LRAIA+KG+GK+HAKWSP+ T+ ++P I +N++ ++ LT
Subjt: LRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINEDLMETLTL
Query: EEKTSWVESSPTKVFELDP--VTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVR
++K WV S PTKV+ P T QV + DP Y E KKAE+ GK LV + K+D FIFTVES+GA+K ++L AI I+K+KL ++
Subjt: EEKTSWVESSPTKVFELDP--VTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVR
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G60850.1 DNA-directed RNA polymerase family protein | 1.1e-27 | 31.03 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
G Y F KV + L +F++ D + ANA RR++IAEVP++AI+ V I N+SV+ DE +AHR+GLIP+ ++ + S + D E
Subjt: GASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQ-TLDVSSKDL-----------YSSDHTVVP---VDFSDSAAAAGEALDTK------GIIIVKLRRGQELRLRAIARKGIGKDHAKW
++ F L KC ++ L V + DL S + T P FS S + E + I+I KL GQE+ L A A KGIGK HAKW
Subjt: SVEFHLRAKCHSDQ-TLDVSSKDL-----------YSSDHTVVP---VDFSDSAAAAGEALDTK------GIIIVKLRRGQELRLRAIARKGIGKDHAKW
Query: SPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPV---THQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIK
SP T + P + + ++ + L V P VF+++ + + V P T E ++ + + VD+ + ++ FIF +ESTG++
Subjt: SPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPV---THQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIK
Query: ASQLILNAIDILKQKLDAV
L A+ IL+ K +A+
Subjt: ASQLILNAIDILKQKLDAV
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| AT1G60850.2 DNA-directed RNA polymerase family protein | 1.1e-27 | 31.03 | Show/hide |
Query: GASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
G Y F KV + L +F++ D + ANA RR++IAEVP++AI+ V I N+SV+ DE +AHR+GLIP+ ++ + S + D E
Subjt: GASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFC
Query: SVEFHLRAKCHSDQ-TLDVSSKDL-----------YSSDHTVVP---VDFSDSAAAAGEALDTK------GIIIVKLRRGQELRLRAIARKGIGKDHAKW
++ F L KC ++ L V + DL S + T P FS S + E + I+I KL GQE+ L A A KGIGK HAKW
Subjt: SVEFHLRAKCHSDQ-TLDVSSKDL-----------YSSDHTVVP---VDFSDSAAAAGEALDTK------GIIIVKLRRGQELRLRAIARKGIGKDHAKW
Query: SPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPV---THQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIK
SP T + P + + ++ + L V P VF+++ + + V P T E ++ + + VD+ + ++ FIF +ESTG++
Subjt: SPAATVTFMYEPSIHINEDLMETLTLEEKTSWVESSPTKVFELDPV---THQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIK
Query: ASQLILNAIDILKQKLDAV
L A+ IL+ K +A+
Subjt: ASQLILNAIDILKQKLDAV
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| AT2G15400.1 DNA-directed RNA polymerase family protein | 3.7e-137 | 77.19 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFEL +TDVSMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L AKC +DQTLDV+S+DLYS+D TV PVDF+ S ++ ++ + KGIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP I INE+
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M TLT EEK +ESSPTKVF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I K DSF+FTVESTGA+KASQL+LNAIDILKQKLDA+RLS
Subjt: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
D+TVEADDQFGELGAHMR G
Subjt: DDTVEADDQFGELGAHMRGG
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| AT2G15400.2 DNA-directed RNA polymerase family protein | 4.3e-93 | 74.46 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+G +YQRFP VKIREL+DDYAKFEL +TDVSMANALRRVMI+EVPT+AI LV+IEVNSSVLNDEFIA RL LIPLTSERAMSMRF +DC+ C+GD CE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L AKC +DQTLDV+S+DLYS+D TV PVDF+ S ++ ++ + KGIII KLRRGQEL+L+A+ARKGIGKDHAKWSPAATVT+MYEP I INE+
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKTSWVESSPTKVFELDPVTHQV
+M TLT EEK +ESSPTKVF +DPVT QV
Subjt: LMETLTLEEKTSWVESSPTKVFELDPVTHQV
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| AT2G15430.1 DNA-directed RNA polymerase family protein | 4.2e-149 | 82.5 | Show/hide |
Query: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
M+GA+YQRFPK+KIREL+DDYAKFEL +TDVSMANALRRVMI+EVPT+AIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Subjt: MEGASYQRFPKVKIRELRDDYAKFELHDTDVSMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCE
Query: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
FCSVEF L +KC +DQTLDV+S+DLYS+D TV PVDF+ ++ + ++ + KGIIIVKLRRGQEL+LRAIARKGIGKDHAKWSPAATVTFMYEP I INED
Subjt: FCSVEFHLRAKCHSDQTLDVSSKDLYSSDHTVVPVDFSDSAAAAGEALDTKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPSIHINED
Query: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
+M+TL+ EEK +ESSPTKVF +DPVT QV+VVDPEAYTYD+EVIKKAEAMGK GL++I+ K+DSFIFTVESTGA+KASQL+LNAID+LKQKLDAVRLS
Subjt: LMETLTLEEKTSWVESSPTKVFELDPVTHQVLVVDPEAYTYDDEVIKKAEAMGKAGLVDITAKEDSFIFTVESTGAIKASQLILNAIDILKQKLDAVRLS
Query: DDTVEADDQFGELGAHMRGG
DDTVEADDQFGELGAHMRGG
Subjt: DDTVEADDQFGELGAHMRGG
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