; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G014050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G014050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSWIB domain-containing protein
Genome locationCmo_Chr11:9890467..9893881
RNA-Seq ExpressionCmoCh11G014050
SyntenyCmoCh11G014050
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022927946.1 uncharacterized protein LOC111434699 [Cucurbita moschata]5.4e-70100Show/hide
Query:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ
        MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK
        KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK
Subjt:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK

XP_022952608.1 uncharacterized protein LOC111455244 [Cucurbita moschata]6.8e-5784.06Show/hide
Query:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ
        MAFVSTF+SGE SLL  RASA  SSVKHPYQ P  NL F+RT+TFAS SNQ TAS RQPRGIMKP+RISPEMQALVG PEISRT+ALKVIW HIKEHNLQ
Subjt:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL
        KPSDKK+IICDEKLK IFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL

XP_022972543.1 uncharacterized protein LOC111471082 [Cucurbita maxima]1.6e-5886.23Show/hide
Query:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ
        MAFVSTF+SGELSLL  RASA  SSVKHPYQ P  NL F+RT+TFAS SNQATAS RQPRGIMKP+RISPEMQALVG PEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL
        KPSDKK+I+CDEKLK IFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL

XP_022989003.1 uncharacterized protein LOC111486197 [Cucurbita maxima]4.5e-6999.28Show/hide
Query:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ
        MAFVSTFISGELSLLTVRASAT SSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK
        KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK
Subjt:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK

XP_038888173.1 uncharacterized protein LOC120078055 isoform X1 [Benincasa hispida]1.1e-5989.13Show/hide
Query:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ
        MAF+STFISGE SLL V+ASAT +SVK PYQ P  NL FARTVTFAS SNQATAS RQPRGIMKP+RISPEMQALVG PEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL
        KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL

TrEMBL top hitse value%identityAlignment
A0A6J1D4Q4 uncharacterized protein LOC1110172911.9e-5278.42Show/hide
Query:  AMAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNL
        AMAFVSTF SGE +LL  RASA  SS+KH  Q PP+NL F R VTFA+ S+QATAS+R+PRGIMKP+ ISPEMQALVGVPEISRTQALKVIW HIKEHNL
Subjt:  AMAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNL

Query:  QKPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL
        Q+P +KK+I+CDEKLK IFGGKDEVGFL+IAGLISPHFL
Subjt:  QKPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL

A0A6J1EIX1 uncharacterized protein LOC1114346992.6e-70100Show/hide
Query:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ
        MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK
        KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK
Subjt:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK

A0A6J1GL33 uncharacterized protein LOC1114552443.3e-5784.06Show/hide
Query:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ
        MAFVSTF+SGE SLL  RASA  SSVKHPYQ P  NL F+RT+TFAS SNQ TAS RQPRGIMKP+RISPEMQALVG PEISRT+ALKVIW HIKEHNLQ
Subjt:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL
        KPSDKK+IICDEKLK IFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL

A0A6J1IAA1 uncharacterized protein LOC1114710827.8e-5986.23Show/hide
Query:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ
        MAFVSTF+SGELSLL  RASA  SSVKHPYQ P  NL F+RT+TFAS SNQATAS RQPRGIMKP+RISPEMQALVG PEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL
        KPSDKK+I+CDEKLK IFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL

A0A6J1JNZ3 uncharacterized protein LOC1114861972.2e-6999.28Show/hide
Query:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ
        MAFVSTFISGELSLLTVRASAT SSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ
Subjt:  MAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQ

Query:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK
        KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK
Subjt:  KPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp275.0e-1045.45Show/hide
Query:  KPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKNIF
        KP ++SP++   +G+ ++SR Q +K +W +IK H+LQ P+DK+ I+CD+KLK++F
Subjt:  KPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKNIF

Q05024 Protein TRI11.4e-0950Show/hide
Query:  ISPEMQALVGVPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKNIFGGK
        +S  +Q  +G  E+ RTQ +K+IW +IKEH+LQ P D++ I+CDEK++ IFG K
Subjt:  ISPEMQALVGVPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKNIFGGK

Q08747 Upstream activation factor subunit UAF303.6e-0848.08Show/hide
Query:  ISPEMQALVGVPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKNIFG
        +S  + +L+G  E++RT+ ++ +WA+IK HNLQ P++KK I+CDEKL+ I G
Subjt:  ISPEMQALVGVPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKNIFG

Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein1.7e-1843.43Show/hide
Query:  RTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK
        RT+   + + +A     + +GI K + +S ++ +  G  E++R  ALK +W ++K HNLQ P++KK I CD+KLK IF GKD+VG  EI  L+SPHF K
Subjt:  RTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK

AT2G14880.1 SWIB/MDM2 domain superfamily protein2.8e-3254.81Show/hide
Query:  STFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATA-SQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQKPS
        STF+   +   + R  +TP S       P + L   R VT A+ S++ TA ++R PRGIMKP+ +SPEMQ +V +PEI+RTQALK IWA+IKEH+LQ P 
Subjt:  STFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQATA-SQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQKPS

Query:  DKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL
        +K+ I+CDEKLK IF G+D VGFLEIA LI PHFL
Subjt:  DKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL

AT2G35605.1 SWIB/MDM2 domain superfamily protein1.3e-1846.46Show/hide
Query:  RTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK
        R +   + S+    + RQ  GI+K   +S  +   +G  E+SRT A+K IW +IK +NLQ P +K+ I+CDE+LK IF GKD VGFLEI+ L+S HF K
Subjt:  RTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK

AT3G03590.1 SWIB/MDM2 domain superfamily protein2.2e-2144.3Show/hide
Query:  SSVPAMAFVSTFISGELSLLTVRASATPS-----SVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVI
        SSV AM F      G  SLL   + AT S     S K P   P +    A+    A + + A  + R   GI K   +SP +   +G  E SRT A+K I
Subjt:  SSVPAMAFVSTFISGELSLLTVRASATPS-----SVKHPYQFPPSNLHFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVI

Query:  WAHIKEHNLQKPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK
        W +IK H+LQ P+DK+ I CDE LK IF GKD+VGFLEI+ L+SPHF+K
Subjt:  WAHIKEHNLQKPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK

AT4G34290.1 SWIB/MDM2 domain superfamily protein2.6e-3052.52Show/hide
Query:  FVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQ---ATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNL
        F +TF+  + + L   +  +PSS++      P+NL   R VT A+ ++     T   R+PRGIMKP+ +S  MQ +VGVPEI RTQALK IWA+IKEH+L
Subjt:  FVSTFISGELSLLTVRASATPSSVKHPYQFPPSNLHFARTVTFASTSNQ---ATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNL

Query:  QKPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL
        Q P +K+ I+CDEKLK IF GK+ VGFLEIA LI PHFL
Subjt:  QKPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAATTTGGGAATTAAGTTCGCCGATATGGAAGATGAAAGCTCACCGAGTTTGGTTTCAAATGAATACTCGACCGACTATGCACAAGGTCATAACTTGACTGGATT
AAGGCGCGTTCAGAATTTCGAGCTTCTCGGTCTCACCACTTCACCTTCGCTCTATCCAGTTTACCGAGCGCACAGGCACACCCAACACTTCCAGTCGTCAGTTCCGGCCA
TGGCTTTCGTCTCCACCTTCATCTCCGGCGAACTGTCGCTCCTCACAGTCAGAGCCTCCGCCACCCCCTCCTCCGTCAAGCATCCCTATCAATTCCCTCCGTCTAATTTG
CACTTCGCCCGCACCGTTACCTTCGCTTCTACCTCCAACCAGGCCACTGCCTCCCAACGCCAGCCCCGAGGTATCATGAAGCCCAAGCGGATTTCTCCGGAGATGCAGGC
GCTTGTCGGTGTTCCCGAGATTTCCCGTACCCAAGCCCTTAAGGTCATTTGGGCTCACATTAAAGAGCATAATCTTCAGAAACCGAGCGACAAAAAAGTCATAATCTGCG
ACGAGAAGCTGAAGAACATATTCGGAGGGAAAGATGAAGTTGGGTTTCTGGAGATTGCAGGATTGATAAGTCCCCACTTTCTAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAATTTGGGAATTAAGTTCGCCGATATGGAAGATGAAAGCTCACCGAGTTTGGTTTCAAATGAATACTCGACCGACTATGCACAAGGTCATAACTTGACTGGATT
AAGGCGCGTTCAGAATTTCGAGCTTCTCGGTCTCACCACTTCACCTTCGCTCTATCCAGTTTACCGAGCGCACAGGCACACCCAACACTTCCAGTCGTCAGTTCCGGCCA
TGGCTTTCGTCTCCACCTTCATCTCCGGCGAACTGTCGCTCCTCACAGTCAGAGCCTCCGCCACCCCCTCCTCCGTCAAGCATCCCTATCAATTCCCTCCGTCTAATTTG
CACTTCGCCCGCACCGTTACCTTCGCTTCTACCTCCAACCAGGCCACTGCCTCCCAACGCCAGCCCCGAGGTATCATGAAGCCCAAGCGGATTTCTCCGGAGATGCAGGC
GCTTGTCGGTGTTCCCGAGATTTCCCGTACCCAAGCCCTTAAGGTCATTTGGGCTCACATTAAAGAGCATAATCTTCAGAAACCGAGCGACAAAAAAGTCATAATCTGCG
ACGAGAAGCTGAAGAACATATTCGGAGGGAAAGATGAAGTTGGGTTTCTGGAGATTGCAGGATTGATAAGTCCCCACTTTCTAAAATGATTGGAAGTACGGAAAATAGGG
ATCTGGGGACATTCAGTTGAGTCCATGAAGATGAACTTTGTGTGTGTTGTTTTGTTGTGGAAGTCTCCAAATCCGGTTGATGCGGATGCTTTTAGGTATTATTCCTCACT
GAATCCTGGCGTTCAGAGCCCTTTTGTTTGTAGTAGTGGATACAGAGGAAAGCTTTTGTAAGAACTTTGGTTGGAGATTTGTGTAGGGATTATTATATTCAAATCTTTGT
TGCTCATTAGTTTGGGAAATCTTTCACTTTTTAATACTACATGCTTACCATTTTGCACTTGGGTTTGCACTTAGCTTCGCCCGATGTGATCGATCAACACATTGTTGTGG
CTACCTATTCTAAACCATTGGAGGTATGATGACACT
Protein sequenceShow/hide protein sequence
MCNLGIKFADMEDESSPSLVSNEYSTDYAQGHNLTGLRRVQNFELLGLTTSPSLYPVYRAHRHTQHFQSSVPAMAFVSTFISGELSLLTVRASATPSSVKHPYQFPPSNL
HFARTVTFASTSNQATASQRQPRGIMKPKRISPEMQALVGVPEISRTQALKVIWAHIKEHNLQKPSDKKVIICDEKLKNIFGGKDEVGFLEIAGLISPHFLK