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CmoCh11G014130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G014130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSmall subunit ribosomal protein S29e
Genome locationCmo_Chr11:9922201..9924199
RNA-Seq ExpressionCmoCh11G014130
SyntenyCmoCh11G014130
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR043140 - Ribosomal protein S14/S29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EAZ20624.1 hypothetical protein OsJ_36239 [Oryza sativa Japonica Group]1.8e-1553.49Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTWIIALMPM-----------KHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQGKVHTNSF
        MGHSNVWNSHPK+YGPGSR   +                K+W S PG+R+PSW DQ+VRA+VLQT+LPQQRQG+ +HQ  + ++ F
Subjt:  MGHSNVWNSHPKSYGPGSRTWIIALMPM-----------KHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQGKVHTNSF

KHN30432.1 hypothetical protein glysoja_033170 [Glycine soja]1.6e-1658.57Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTWIIALMPMKHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQGKV
        MGHSNVWNSHPK+YGPGSRTW +      H   +P + + SW+DQ++ AYVLQ +LP+Q QGNW+HQ  V
Subjt:  MGHSNVWNSHPKSYGPGSRTWIIALMPMKHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQGKV

RXH91607.1 hypothetical protein DVH24_020630 [Malus domestica]1.7e-0570.27Show/hide
Query:  LPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQGKV
        LP + KPSWVD +VRA VLQ +LPQQRQG+W+HQG V
Subjt:  LPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQGKV

TQE03267.1 hypothetical protein C1H46_011079 [Malus baccata]1.7e-0574.29Show/hide
Query:  LPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQG
        LP + KPSWVD +VRA VLQ +LPQQRQG+WVHQG
Subjt:  LPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQG

XP_037477571.1 uncharacterized protein LOC119354910 isoform X2 [Triticum dicoccoides]1.1e-0447.54Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTWIIALMPMKHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQ
        +GHSNVWNSHPK+YG G               S+P L + +W D +VRA VLQ + PQQR+
Subjt:  MGHSNVWNSHPKSYGPGSRTWIIALMPMKHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQ

TrEMBL top hitse value%identityAlignment
A0A0B2RF08 Uncharacterized protein7.8e-1758.57Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTWIIALMPMKHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQGKV
        MGHSNVWNSHPK+YGPGSRTW +      H   +P + + SW+DQ++ AYVLQ +LP+Q QGNW+HQ  V
Subjt:  MGHSNVWNSHPKSYGPGSRTWIIALMPMKHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQGKV

A0A0E0JAX2 Uncharacterized protein8.7e-1653.49Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTWIIALMPM-----------KHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQGKVHTNSF
        MGHSNVWNSHPK+YGPGSR   +                K+W S PG+R+PSW DQ+VRA+VLQT+LPQQRQG+ +HQ  + ++ F
Subjt:  MGHSNVWNSHPKSYGPGSRTWIIALMPM-----------KHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQGKVHTNSF

A0A0E0RHR1 Uncharacterized protein8.7e-1653.49Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTWIIALMPM-----------KHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQGKVHTNSF
        MGHSNVWNSHPK+YGPGSR   +                K+W S PG+R+PSW DQ+VRA+VLQT+LPQQRQG+ +HQ  + ++ F
Subjt:  MGHSNVWNSHPKSYGPGSRTWIIALMPM-----------KHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQGKVHTNSF

A0A4D9BYH1 Small subunit ribosomal protein S29e5.6e-1561.19Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTWIIALMPMKHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQ
        MGHSN+WNSHPK+YGPGSRT          W + P +RK SW +QKV A VLQT+LPQQ +GNW+HQ
Subjt:  MGHSNVWNSHPKSYGPGSRTWIIALMPMKHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQ

A3CHR1 Uncharacterized protein8.7e-1653.49Show/hide
Query:  MGHSNVWNSHPKSYGPGSRTWIIALMPM-----------KHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQGKVHTNSF
        MGHSNVWNSHPK+YGPGSR   +                K+W S PG+R+PSW DQ+VRA+VLQT+LPQQRQG+ +HQ  + ++ F
Subjt:  MGHSNVWNSHPKSYGPGSRTWIIALMPM-----------KHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQGKVHTNSF

SwissProt top hitse value%identityAlignment
Q5I7K3 40S ribosomal protein S299.6e-0489.47Show/hide
Query:  MGHSNVWNSHPKSYGPGSR
        MGHSNVWNSHPK+YG GSR
Subjt:  MGHSNVWNSHPKSYGPGSR

Q680P8 40S ribosomal protein S291.5e-0494.74Show/hide
Query:  MGHSNVWNSHPKSYGPGSR
        MGHSNVWNSHPK YGPGSR
Subjt:  MGHSNVWNSHPKSYGPGSR

Arabidopsis top hitse value%identityAlignment
AT3G43980.1 Ribosomal protein S14p/S29e family protein1.0e-0594.74Show/hide
Query:  MGHSNVWNSHPKSYGPGSR
        MGHSNVWNSHPK YGPGSR
Subjt:  MGHSNVWNSHPKSYGPGSR

AT3G44010.1 Ribosomal protein S14p/S29e family protein1.0e-0594.74Show/hide
Query:  MGHSNVWNSHPKSYGPGSR
        MGHSNVWNSHPK YGPGSR
Subjt:  MGHSNVWNSHPKSYGPGSR

AT4G33865.1 Ribosomal protein S14p/S29e family protein1.0e-0594.74Show/hide
Query:  MGHSNVWNSHPKSYGPGSR
        MGHSNVWNSHPK YGPGSR
Subjt:  MGHSNVWNSHPKSYGPGSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCACTCTAACGTCTGGAACTCGCACCCTAAGAGCTATGGTCCCGGCTCCCGCACCTGGATCATAGCTTTAATGCCGATGAAACATTGGGAGTCCTTACCGGGTTT
GCGGAAACCCTCATGGGTTGATCAGAAAGTACGGGCTTATGTGCTGCAGACAATGCTTCCGCAGCAACGCCAAGGAAATTGGGTTCATCAAGGTAAGGTGCACACAAATT
CATTTGGGCACTGA
mRNA sequenceShow/hide mRNA sequence
GGGTTTCTTCTCAATGTCTCCCCTATAAATACTCGCTTCTTCTTCATCCTCTGGTTCTTCAGAAAGCATTTGCCGCTTGCGAGGATTTTCGAAGGCTTAACGAGCTCTTA
AGATTTCAATCTCTTAGGCAATCCAAGCATGGGGCACTCTAACGTCTGGAACTCGCACCCTAAGAGCTATGGTCCCGGCTCCCGCACCTGGATCATAGCTTTAATGCCGA
TGAAACATTGGGAGTCCTTACCGGGTTTGCGGAAACCCTCATGGGTTGATCAGAAAGTACGGGCTTATGTGCTGCAGACAATGCTTCCGCAGCAACGCCAAGGAAATTGG
GTTCATCAAGGTAAGGTGCACACAAATTCATTTGGGCACTGA
Protein sequenceShow/hide protein sequence
MGHSNVWNSHPKSYGPGSRTWIIALMPMKHWESLPGLRKPSWVDQKVRAYVLQTMLPQQRQGNWVHQGKVHTNSFGH