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CmoCh11G014870 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G014870
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTropomyosin-like
Genome locationCmo_Chr11:10543308..10549617
RNA-Seq ExpressionCmoCh11G014870
SyntenyCmoCh11G014870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022547.1 hypothetical protein SDJN02_16281 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-6897.97Show/hide
Query:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ
        MEDKG+GTDRWTGAVANLTEMASNLESFQKLLLKKAVYVD++TFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ
Subjt:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
        EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
XP_022927931.1 uncharacterized protein LOC111434686 [Cucurbita moschata]1.4e-69100Show/hide
Query:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ
        MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ
Subjt:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
        EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
XP_022963475.1 uncharacterized protein LOC111463800 isoform X1 [Cucurbita moschata]4.7e-6592.57Show/hide
Query:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ
        MEDKGKGTDRW+GAVAN+TEMASNLES QK+L+KKAVYVD++TFARASLCS+QARTIKVL+QRVETLERELDAAITAAAHARSEKRQAEAAQK AELHVQ
Subjt:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
        EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGK+
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
XP_022988990.1 uncharacterized protein LOC111486188 [Cucurbita maxima]3.9e-6796.62Show/hide
Query:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ
        MEDKGKGTDRWTGAVANLTEMASNLE FQKLLLKKAVYVD++TFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQK AELHVQ
Subjt:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
        EVTRELENTTKVFQLHMDELRAKQEEINKRD+DIKLLEAIIQTLGGKK
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
XP_038886855.1 uncharacterized protein LOC120077075 isoform X1 [Benincasa hispida]8.1e-6593.24Show/hide
Query:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ
        MEDKGKGTDRW+GAVANLTEMASNLES QKLLLKKAVYVD++TFARASLCSQQARTIKVL+QRVETLERELDAAITAAAHARSEKRQAEAAQ+ AELHVQ
Subjt:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
        EVTRELENTTKVFQLHMDELR KQEEI+KRDKDIKLLEAIIQTLGGK+
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
TrEMBL top hitse value%identityAlignment
A0A6J1EIV8 uncharacterized protein LOC1114346866.9e-70100Show/hide
Query:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ
        MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ
Subjt:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
        EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
A0A6J1HG82 uncharacterized protein LOC111463800 isoform X24.3e-6493.1Show/hide
Query:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ
        MEDKGKGTDRW+GAVAN+TEMASNLES QK+L+KKAVYVD++TFARASLCS+QARTIKVL+QRVETLERELDAAITAAAHARSEKRQAEAAQK AELHVQ
Subjt:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLG
        EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLG
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLG
A0A6J1HI40 uncharacterized protein LOC111463800 isoform X12.3e-6592.57Show/hide
Query:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ
        MEDKGKGTDRW+GAVAN+TEMASNLES QK+L+KKAVYVD++TFARASLCS+QARTIKVL+QRVETLERELDAAITAAAHARSEKRQAEAAQK AELHVQ
Subjt:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
        EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGK+
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
A0A6J1HXA5 uncharacterized protein LOC111467076 isoform X15.1e-6592.57Show/hide
Query:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ
        MEDKGKGTDRW+ AVAN+TEMASNLES QK+L+KKAVYVD++TFARASLCS+QARTIKVL+QRVETLERELDAAITAAAHARSEKRQAEAAQK AELHVQ
Subjt:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
        EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
A0A6J1JEJ3 uncharacterized protein LOC1114861881.9e-6796.62Show/hide
Query:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ
        MEDKGKGTDRWTGAVANLTEMASNLE FQKLLLKKAVYVD++TFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQK AELHVQ
Subjt:  MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQ

Query:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
        EVTRELENTTKVFQLHMDELRAKQEEINKRD+DIKLLEAIIQTLGGKK
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G64180.1 unknown protein5.8e-5374.5Show/hide
Query:  MEDKGKGTD-RWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHV
        ME++  G+D RW G++ N+TEMASNL+S QKLLLKKAV+V+E TF+RASL S+QARTIKVL+QRV+TLERELDAAITAAAHARSEKRQAE++QK AE   
Subjt:  MEDKGKGTD-RWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHV

Query:  QEVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK
        Q+VT+ELENTTKVF+LHM+ELR  QE+I+KRD +IKLLEAIIQTLGGK+
Subjt:  QEVTRELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGACAAGGGCAAAGGAACGGACAGATGGACCGGCGCCGTTGCCAATCTAACTGAGATGGCTTCCAACTTGGAGTCATTCCAGAAGCTTTTACTCAAGAAAGCTGT
CTATGTCGACGAACAGACGTTTGCCAGAGCTTCATTGTGCTCCCAACAAGCAAGGACGATCAAGGTTCTTGATCAAAGGGTTGAGACTTTGGAAAGGGAACTTGATGCTG
CTATCACTGCTGCTGCTCATGCTCGTTCAGAAAAACGTCAGGCTGAGGCAGCACAAAAAACTGCTGAACTACACGTGCAGGAGGTCACTCGAGAGCTCGAGAACACTACA
AAGGTATTTCAACTGCATATGGATGAATTGCGCGCGAAACAGGAAGAAATCAATAAACGTGATAAGGATATTAAGCTCTTGGAAGCAATAATTCAGACTCTTGGAGGGAA
AAAATGA
mRNA sequenceShow/hide mRNA sequence
TGAAGGTAATGGCATGATCGGGTGGGTTCTTAGCTCCCTCTCCAAGTCTCTCTACACGGATCATGACGTCGAACGACCATTGAATTGCGGATTTTCAAAAGGGGCAAGCG
TCGAAGAAGATTTGGATCATGGAGGACAAGGGCAAAGGAACGGACAGATGGACCGGCGCCGTTGCCAATCTAACTGAGATGGCTTCCAACTTGGAGTCATTCCAGAAGCT
TTTACTCAAGAAAGCTGTCTATGTCGACGAACAGACGTTTGCCAGAGCTTCATTGTGCTCCCAACAAGCAAGGACGATCAAGGTTCTTGATCAAAGGGTTGAGACTTTGG
AAAGGGAACTTGATGCTGCTATCACTGCTGCTGCTCATGCTCGTTCAGAAAAACGTCAGGCTGAGGCAGCACAAAAAACTGCTGAACTACACGTGCAGGAGGTCACTCGA
GAGCTCGAGAACACTACAAAGGTATTTCAACTGCATATGGATGAATTGCGCGCGAAACAGGAAGAAATCAATAAACGTGATAAGGATATTAAGCTCTTGGAAGCAATAAT
TCAGACTCTTGGAGGGAAAAAATGACGTTCAGCAAATCTGTGAGGATTTGGTTTTTATATTTAAAACCCTGTTTTCTTGATTGGTTGGTGATGAGTTAACTAGAGGGTGA
CATGTACCAAGTGGCTGTGAAGTGCTAAAGAATAGATGTGATGCTCTTAAGTTTATTCAAAGGCATACAAAAAGATAGCTCTACTCGAGGAACCGAGCATAAAAAAAGGT
TGGTACCGGTATCGGAATCAACTTATATGTATCTTGATTGATCTCATGGGATAACTTTATGACTTTACAATATTAGATCGAAAGAATTCAAATTTGTAAAACTGTAATGT
TCTATGTAGATGGCGGTTATAGAGTTTGAACTTGTTAAATATTTTACCTTTTTGACTTACTCGAAAATTTGATGATATGAAGTTCAAGG
Protein sequenceShow/hide protein sequence
MEDKGKGTDRWTGAVANLTEMASNLESFQKLLLKKAVYVDEQTFARASLCSQQARTIKVLDQRVETLERELDAAITAAAHARSEKRQAEAAQKTAELHVQEVTRELENTT
KVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGKK