; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G014980 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G014980
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGlycine-rich RNA-binding protein
Genome locationCmo_Chr11:10635732..10637945
RNA-Seq ExpressionCmoCh11G014980
SyntenyCmoCh11G014980
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022557.1 Glycine-rich RNA-binding protein RZ1A [Cucurbita argyrosperma subsp. argyrosperma]3.0e-10899.06Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
        MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG

Query:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS--GGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY
        RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS  GGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY
Subjt:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS--GGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY

Query:  ERRSSGSGGFRS
        ERRSSGSGGFRS
Subjt:  ERRSSGSGGFRS

XP_022154392.1 glycine-rich RNA-binding protein RZ1A [Momordica charantia]5.3e-9791.9Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
        MAEE EYRCFIGGLSWSTSDR LKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG

Query:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYER
        RD++RDRNRDFGGGRGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS  GGGGSGRYGPDRNGDR GGRNR +GDRGGSGSDR++RDRSGPYER
Subjt:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYER

Query:  RSSGSGGFRS
        RS  SGGFRS
Subjt:  RSSGSGGFRS

XP_022927772.1 glycine-rich RNA-binding protein RZ1A-like [Cucurbita moschata]9.3e-110100Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
        MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG

Query:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYER
        RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYER
Subjt:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYER

Query:  RSSGSGGFRS
        RSSGSGGFRS
Subjt:  RSSGSGGFRS

XP_022988948.1 glycine-rich RNA-binding protein RZ1A-like [Cucurbita maxima]1.9e-10798.58Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
        MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG

Query:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGG-GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYE
        RD++RDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGG GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYE
Subjt:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGG-GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYE

Query:  RRSSGSGGFRS
        RRSSGSGGFRS
Subjt:  RRSSGSGGFRS

XP_023531290.1 glycine-rich RNA-binding protein RZ1A-like isoform X1 [Cucurbita pepo subsp. pepo]8.7e-10898.12Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
        MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG

Query:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS---GGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGP
        RDN+RDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS   GGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGP
Subjt:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS---GGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGP

Query:  YERRSSGSGGFRS
        YERRSSGSGGFRS
Subjt:  YERRSSGSGGFRS

TrEMBL top hitse value%identityAlignment
A0A0A0K5W4 Uncharacterized protein1.7e-9691.51Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPR-
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPR-

Query:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY
        GRD++RDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGR GGRYGGRDDKYSGGGGGG GRYGPDRNGDR GGRNR +GDRGGSGSDRYSRDRSGPY
Subjt:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPY

Query:  ERRSSGSGGFRS
        ERR  GSGGFRS
Subjt:  ERRSSGSGGFRS

A0A1S3C164 glycine-rich RNA-binding protein RZ1A9.8e-9791.12Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPR-
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPR-

Query:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY---SGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSG
        GRD++RDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKY    GGGGGGSGRYGPDRNGDR GGRNR TGDRGGSGSDRYSRDRSG
Subjt:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY---SGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSG

Query:  PYERRSSGSGGFRS
        PYERR  GSGGFRS
Subjt:  PYERRSSGSGGFRS

A0A6J1DLZ2 glycine-rich RNA-binding protein RZ1A2.6e-9791.9Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
        MAEE EYRCFIGGLSWSTSDR LKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG

Query:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYER
        RD++RDRNRDFGGGRGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS  GGGGSGRYGPDRNGDR GGRNR +GDRGGSGSDR++RDRSGPYER
Subjt:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYER

Query:  RSSGSGGFRS
        RS  SGGFRS
Subjt:  RSSGSGGFRS

A0A6J1EI50 glycine-rich RNA-binding protein RZ1A-like4.5e-110100Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
        MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG

Query:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYER
        RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYER
Subjt:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYER

Query:  RSSGSGGFRS
        RSSGSGGFRS
Subjt:  RSSGSGGFRS

A0A6J1JNT9 glycine-rich RNA-binding protein RZ1A-like9.4e-10898.58Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
        MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRG

Query:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGG-GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYE
        RD++RDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGG GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYE
Subjt:  RDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGG-GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYE

Query:  RRSSGSGGFRS
        RRSSGSGGFRS
Subjt:  RRSSGSGGFRS

SwissProt top hitse value%identityAlignment
P10979 Glycine-rich RNA-binding, abscisic acid-inducible protein6.9e-2344.44Show/hide
Query:  AEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGR
        A + EYRCF+GGL+W+TS+  L+ AF  +G + ++KV+ D+ +GRSRGFGFVTF  + +M +AI+ MNG +LDGR ITV++AQ   G G        RG 
Subjt:  AEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGR

Query:  DNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEG--GRGGRYGGRDDKYSGGGGGGSG
                  GGG G   RD    G  G+  R     G  G GG YGGR +   GG GGG G
Subjt:  DNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEG--GRGGRYGGRDDKYSGGGGGGSG

P49310 Glycine-rich RNA-binding protein GRP1A1.1e-2544.81Show/hide
Query:  EYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDNER
        EYRCF+GGL+W+T DR L+ AF ++G + ++K++ D+ +GRSRGFGFVTF ++K+M +AI+ MNG DLDGR+ITV++AQ ++GSG               
Subjt:  EYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDNER

Query:  DRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRY--GGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSG
              GGG G      ++ G  G +       GG GG Y  GGR+  YSGGGGG S R G    G   GG  RD G+ GG G
Subjt:  DRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRY--GGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSG

Q03878 Glycine-rich RNA-binding protein9.6e-2544.92Show/hide
Query:  EGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDN
        E EYRCF+GGL+W+T+D  L++AF +FG + ++K++ D+ +GRSRGFGFVTF ++K+M +AI+ MNG +LDGR ITV++AQ ++GSG    G R  G   
Subjt:  EGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDN

Query:  ERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRY
               +GGG G   R                 EGG GG YGGR +   GG GGG G YG    G R GG   D G  GG G  R+
Subjt:  ERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRY

Q99070 Glycine-rich RNA-binding protein 23.1e-2342.41Show/hide
Query:  AEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGR
        A + EYRCF+GGL+W+T++  L++AF  FG + ++KV+ D+ +GRSRGFGFVTF  +++M +AI+ MNG +LDGR ITV++AQ   G G           
Subjt:  AEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGR

Query:  DNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDD---KYSGGG-GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSD
                  GGG G         G  G+  RE    GG GG YGGR +    Y GGG GGG G YG    G   GG     G+RG SG +
Subjt:  DNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDD---KYSGGG-GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSD

Q9LIN3 Glycine-rich RNA-binding protein RZ1A8.9e-6358.87Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQ-GSGRDNDGDRPR
        M+E+ EYRCFIGGL+W+TSDRGL++AFEK+GHL EAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR ITVDKAQP+Q G+GRDNDGDR R
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQ-GSGRDNDGDRPR

Query:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGG------------------------------RYGGRDDKYS-------------GGG
         R  +RDR+R   GGRG    DCFKCGKPGHFARECPSE  R G                              RYG +DD+YS             G  
Subjt:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGG------------------------------RYGGRDDKYS-------------GGG

Query:  GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYERRSSG
         GG  RYGPDR+G+R+GGR+RD G RG  G +R+SR    PY+R  +G
Subjt:  GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYERRSSG

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 28.4e-2444.5Show/hide
Query:  EYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDNER
        EYRCF+GGL+W+T DR L+ AF ++G + ++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGR+ITV++AQ ++GSG    G   RG     
Subjt:  EYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDNER

Query:  DRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSG
              GGG G      ++ G  G ++    S GG GGR  G    YSGGGGG S R G    G   GGR    G  GG     Y     G
Subjt:  DRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSG

AT2G21660.2 cold, circadian rhythm, and rna binding 22.2e-2446.06Show/hide
Query:  EYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDNER
        EYRCF+GGL+W+T DR L+ AF ++G + ++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGR+ITV++AQ ++GSG    G R  G     
Subjt:  EYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDNER

Query:  DRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG-GGGGSGRYGPDRNG
             +GGG G         G  G ++    S GG GG YGG   +  GG GGG  G YG    G
Subjt:  DRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGG-GGGGSGRYGPDRNG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain6.3e-6458.87Show/hide
Query:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQ-GSGRDNDGDRPR
        M+E+ EYRCFIGGL+W+TSDRGL++AFEK+GHL EAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR ITVDKAQP+Q G+GRDNDGDR R
Subjt:  MAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQ-GSGRDNDGDRPR

Query:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGG------------------------------RYGGRDDKYS-------------GGG
         R  +RDR+R   GGRG    DCFKCGKPGHFARECPSE  R G                              RYG +DD+YS             G  
Subjt:  GRDNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGG------------------------------RYGGRDDKYS-------------GGG

Query:  GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYERRSSG
         GG  RYGPDR+G+R+GGR+RD G RG  G +R+SR    PY+R  +G
Subjt:  GGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYERRSSG

AT4G39260.1 cold, circadian rhythm, and RNA binding 15.4e-2343.17Show/hide
Query:  EGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDN
        E EYRCF+GGL+W+T+D  L+  F +FG + ++K++ D+ SGRSRGFGFVTF ++KAM +AI+ MNG +LDGR ITV++AQ ++GSG    G   RG   
Subjt:  EGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGRDN

Query:  ERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSG
                GGG  S     +  G  G ++      GG GG Y  R   Y  GGGGG   YG     +  G    D G  GG G
Subjt:  ERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain8.4e-2441Show/hide
Query:  AEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGR
        A+EG  R F+GGLS   +DR L+ AF +FG + + ++++++ +GRSRGFGF+TF +++AMDE+I+ M+G D   R I+V++A+P  G           GR
Subjt:  AEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGR

Query:  DNERD--RNRDFGGGRGSNSR----DCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDR
        D+         FGGG G   R    +CFKCG+ GH+AR+CPS  GGRGG  GG   + S   GG  GR     + DR   R R   DR    +   +RDR
Subjt:  DNERD--RNRDFGGGRGSNSR----DCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTTCTTCGATGTAGCTCGTGTAATGGCTGAAGAGGGGGAGTATCGGTGCTTTATTGGCGGCCTTTCTTGGTCAACTAGTGACAGAGGTCTTAAAGAAGCATTCGA
AAAGTTTGGCCATCTTCAAGAGGCCAAGGTAGTTGTTGACAAGTTTTCTGGACGTTCCCGTGGTTTTGGTTTTGTTACTTTTGATGAGAAGAAAGCTATGGATGAGGCAA
TCAAAGCCATGAATGGAATGGATTTAGATGGCCGGGCTATTACAGTTGATAAGGCTCAGCCTAACCAAGGTTCAGGTAGAGACAACGATGGTGATCGTCCACGTGGTCGT
GACAACGAGCGTGATCGAAATCGAGATTTTGGTGGTGGGCGTGGATCTAACAGTAGAGATTGCTTTAAATGTGGGAAGCCAGGGCATTTTGCCCGGGAATGTCCCAGTGA
AGGCGGTAGAGGAGGTAGGTATGGAGGGAGGGATGACAAATATAGTGGCGGCGGCGGCGGTGGCAGTGGTCGTTATGGACCAGATCGAAATGGAGATAGATCTGGTGGGC
GCAATAGGGATACTGGTGATCGAGGAGGTTCGGGAAGTGATCGATACAGTCGCGACCGCTCTGGGCCATATGAACGACGGAGTTCAGGTTCTGGTGGCTTTCGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTTCTTCGATGTAGCTCGTGTAATGGCTGAAGAGGGGGAGTATCGGTGCTTTATTGGCGGCCTTTCTTGGTCAACTAGTGACAGAGGTCTTAAAGAAGCATTCGA
AAAGTTTGGCCATCTTCAAGAGGCCAAGGTAGTTGTTGACAAGTTTTCTGGACGTTCCCGTGGTTTTGGTTTTGTTACTTTTGATGAGAAGAAAGCTATGGATGAGGCAA
TCAAAGCCATGAATGGAATGGATTTAGATGGCCGGGCTATTACAGTTGATAAGGCTCAGCCTAACCAAGGTTCAGGTAGAGACAACGATGGTGATCGTCCACGTGGTCGT
GACAACGAGCGTGATCGAAATCGAGATTTTGGTGGTGGGCGTGGATCTAACAGTAGAGATTGCTTTAAATGTGGGAAGCCAGGGCATTTTGCCCGGGAATGTCCCAGTGA
AGGCGGTAGAGGAGGTAGGTATGGAGGGAGGGATGACAAATATAGTGGCGGCGGCGGCGGTGGCAGTGGTCGTTATGGACCAGATCGAAATGGAGATAGATCTGGTGGGC
GCAATAGGGATACTGGTGATCGAGGAGGTTCGGGAAGTGATCGATACAGTCGCGACCGCTCTGGGCCATATGAACGACGGAGTTCAGGTTCTGGTGGCTTTCGTTCTTGA
TAGAATCGTGTCTTCTCTGTTAAGCTTACATGGAGGGATCTTGCTGTTATGTCCTGCAGAGTGTTAATGTTTCTTTCAACAGGTTGTCTATGTTACAGTTCAGATATCTG
AAGTGCAGAACTTGGCGTTAGTATTGAGACATTTGTGTTCCTATGTGATGAATTTGGTATCTTGGTACAATGGTGTCTAATGTGTTCTTGACATATTCATTCAAATCTGG
TTTTATGGTCTTTGAATGCCAATGTAGCTGCTGGATTACTTATCACAGGGAAATTGCAATAACTGCTAAAAATTTCTATTAAAGTACAACTAGACCTGGTTTTTGATCTG
GATGGGTATTGAGAGGATCGGGTTTTTGATAAGCTGCGACTAGTGATCTGTGTCCCGACCCGGAAAGTTGGAAGTGAAATCTCCATTTCAGGATGTTCTTCCCATTGTCT
TGGAGGAATTTACAGCATTGTTCCTTTTTATGATCTTTTTGGGTGCATAATACCGTTTCTTGTTAACTTAAAACATACCAAAGCCTTTGGGATGCTCAAGCAATTTTGCA
AATAAAATCATTTAATCTACAAATACGTCCTGCTGGCTTATGGTCGAGTGGTCTCGTACACGCTAAAACGCTCGGCAAGTTGTTTGGAAGCTCTTGAGAGTTCAGCAACT
GCTGCCCTATCTTTTCCACTTGTGAGTCCTATTTCCAGTCTGCTCTTGTTGGGGAGTCTTTTGGTGTTCTTGGTTTTGTTTGCGGAGATTGATTCAGATGTTTGGAGTTT
CTATGATGATCATCATCGTCCCTTTCACCTTGTCTGCTTGTTGGATGATAAGTCTGGTTCCTTGTCCTTTGAGGTTTCTTTCTGTTCTTTTCCTTGTCTGTTATACGATT
AAAGGAAACCATCTCGTGTCGCCTCTTCCCCGTTTGCTATACCATGTGGAAAGTGTTATAGGTGTGACCGAGGAAGCTAAATAGCGTCCCGACACGACCCCGACACCAAC
CCCGACACCAACCCCGACACCAACCCGGACAAC
Protein sequenceShow/hide protein sequence
MWFFDVARVMAEEGEYRCFIGGLSWSTSDRGLKEAFEKFGHLQEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDNDGDRPRGR
DNERDRNRDFGGGRGSNSRDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSGGGGGGSGRYGPDRNGDRSGGRNRDTGDRGGSGSDRYSRDRSGPYERRSSGSGGFRS