; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G015810 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G015810
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationCmo_Chr11:11354310..11356317
RNA-Seq ExpressionCmoCh11G015810
SyntenyCmoCh11G015810
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581126.1 hypothetical protein SDJN03_21128, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3068.93Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN------PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVV
        M+YPY + H PPETYPPPGY PPQPGYPG+      PPPPHQGYQ YFYDGY PSAP PPPPPGPPPPPY HQHYHYDDR++CSSFL G        C+ 
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN------PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVV

Query:  VVC
         +C
Subjt:  VVC
KAG7022631.1 hypothetical protein SDJN02_16365 [Cucurbita argyrosperma subsp. argyrosperma]8.1e-4791.84Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVCW
        MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRK    V++ +
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVCW
XP_022928579.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]2.1e-4287.63Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVC
        MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG        C+  +C
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVC
XP_022934109.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]4.8e-3171Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVC
        M+YPY + H PPETYPPPGY PPQPGYPG+   PPPPHQGYQ YFYDGY PSAP PPPPPGPPPPPY HQHYHYDDR++CSSFL G        C+  +C
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVC
XP_022989747.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima]3.9e-4185.57Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVC
        MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQ+YFYDGYQPSAPLPPPPPGPPPPPYHHQHY+YDDRDECSSFLRG        C+  +C
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVC
TrEMBL top hitse value%identityAlignment
A0A5A7VHS2 Cysteine-rich and transmembrane domain-containing protein A-like6.7e-3179.31Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGW
        MSY Y ++H PPETYPPPGYPPPQPGYPG+   PPPPHQGYQ YFYDGYQPSA    PPP PPPPPYHHQHYHYDDR++CSSFL GW
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGW
A0A6J1EL88 cysteine-rich and transmembrane domain-containing protein WIH2-like1.0e-4287.63Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVC
        MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRG        C+  +C
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVC
A0A6J1F1N0 cysteine-rich and transmembrane domain-containing protein WIH2-like2.3e-3171Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVC
        M+YPY + H PPETYPPPGY PPQPGYPG+   PPPPHQGYQ YFYDGY PSAP PPPPPGPPPPPY HQHYHYDDR++CSSFL G        C+  +C
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVC
A0A6J1J313 cysteine-rich and transmembrane domain-containing protein WIH2-like2.3e-3171Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVC
        M+YPY + H PPETYPPPGY PPQPGYPG+   PPPPHQGYQ YFYDGY PSAP PPPPPGPPPPPY HQHYHYDDR++CSSFL G        C+  +C
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGN---PPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVC
A0A6J1JGP0 cysteine-rich and transmembrane domain-containing protein WIH2-like1.9e-4185.57Show/hide
Query:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVC
        MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQ+YFYDGYQPSAPLPPPPPGPPPPPYHHQHY+YDDRDECSSFLRG        C+  +C
Subjt:  MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12810.1 proline-rich family protein7.9e-0838.58Show/hide
Query:  SHHHTPPETYPPPGYPP--PQPGYPGNPPPP--------HQ---------------------GYQDYFYDGYQPSAPLPPPPPGPPPPPY---HHQHYHY
        S+   PPE+YPPPGY    P PGYP  PPPP        H+                     GYQ YF  G  P     PPPP PPP  Y   HH H+HY
Subjt:  SHHHTPPETYPPPGYPP--PQPGYPGNPPPP--------HQ---------------------GYQDYFYDGYQPSAPLPPPPPGPPPPPY---HHQHYHY

Query:  DDRDE-CSSFLRGWKKRRKLHCVVVVC
         D D  C SF+RG        C+  +C
Subjt:  DDRDE-CSSFLRGWKKRRKLHCVVVVC
AT1G12810.2 proline-rich family protein7.9e-0841.59Show/hide
Query:  SHHHTPPETYPPPGYPP--PQPGYPGNPPPP--------HQ---------------------GYQDYFYDGYQPSAPLPPPPPGPPPPPY---HHQHYHY
        S+   PPE+YPPPGY    P PGYP  PPPP        H+                     GYQ YF  G  P     PPPP PPP  Y   HH H+HY
Subjt:  SHHHTPPETYPPPGYPP--PQPGYPGNPPPP--------HQ---------------------GYQDYFYDGYQPSAPLPPPPPGPPPPPY---HHQHYHY

Query:  DDRDE-CSSFLRG
         D D  C SF+RG
Subjt:  DDRDE-CSSFLRG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTACCCTTACAGCCACCACCATACGCCGCCTGAAACCTACCCTCCTCCCGGATACCCTCCGCCGCAGCCTGGTTATCCCGGCAATCCTCCGCCGCCACATCAAGG
CTATCAAGACTATTTCTACGATGGCTATCAACCATCCGCACCGCTTCCGCCTCCACCGCCCGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATCACTACGACGATC
GAGATGAATGCTCCTCCTTCCTTCGTGGATGGAAGAAAAGGAGGAAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCTGTTTCCGATAAACGTTGCGAA
ATCGGTGTTGTTCGGTTTGCTTGGCCGTGCAGTGTTCGTGTCTATGATTATGAAGCAGTGCCGGTTTTCGAGTCGCTTGAAATAAGATCTGTAGTTTTCAGGGTTGTTGT
GTGTTTGTGTACACTTTCTGTGTTGTTTGATACCTAA
mRNA sequenceShow/hide mRNA sequence
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCAATTTCCTCCGTCGTCCATTTCCATTTTGAGGGAAATTATGAGCTACCCTTACAGCCACCACCATA
CGCCGCCTGAAACCTACCCTCCTCCCGGATACCCTCCGCCGCAGCCTGGTTATCCCGGCAATCCTCCGCCGCCACATCAAGGCTATCAAGACTATTTCTACGATGGCTAT
CAACCATCCGCACCGCTTCCGCCTCCACCGCCCGGCCCTCCTCCACCGCCTTATCATCATCAGCACTATCACTACGACGATCGAGATGAATGCTCCTCCTTCCTTCGTGG
ATGGAAGAAAAGGAGGAAGCTACACTGTGTTGTTGTTGTATGTTGGAGGAGTGCTTGGCCTGTTTCCGATAAACGTTGCGAAATCGGTGTTGTTCGGTTTGCTTGGCCGT
GCAGTGTTCGTGTCTATGATTATGAAGCAGTGCCGGTTTTCGAGTCGCTTGAAATAAGATCTGTAGTTTTCAGGGTTGTTGTGTGTTTGTGTACACTTTCTGTGTTGTTT
GATACCTAA
Protein sequenceShow/hide protein sequence
MSYPYSHHHTPPETYPPPGYPPPQPGYPGNPPPPHQGYQDYFYDGYQPSAPLPPPPPGPPPPPYHHQHYHYDDRDECSSFLRGWKKRRKLHCVVVVCWRSAWPVSDKRCE
IGVVRFAWPCSVRVYDYEAVPVFESLEIRSVVFRVVVCLCTLSVLFDT