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CmoCh11G016100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G016100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein, putative
Genome locationCmo_Chr11:11520177..11523795
RNA-Seq ExpressionCmoCh11G016100
SyntenyCmoCh11G016100
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588894.1 hypothetical protein SDJN03_17459, partial [Cucurbita argyrosperma subsp. sororia]6.9e-4799.06Show/hide
Query:  ICSTTGNQRVGFCVLLRLSVGIEPKVEGFELMALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDI
        ICSTTGNQRVGFCVLLRLSVGIEPKVEGFELMALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKT HKDI
Subjt:  ICSTTGNQRVGFCVLLRLSVGIEPKVEGFELMALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDI

Query:  PKDDKH
        PKDDKH
Subjt:  PKDDKH

KAG7022659.1 hypothetical protein SDJN02_16393 [Cucurbita argyrosperma subsp. argyrosperma]5.5e-2898.67Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDIPKDDKH
        MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKT HKDIPKDDKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDIPKDDKH

XP_022935264.1 uncharacterized protein LOC111442202 [Cucurbita moschata]7.9e-2796Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDIPKDDKH
        MALTNFILTVAGV AVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELE+KTS KDIPKDDKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDIPKDDKH

XP_023531886.1 uncharacterized protein LOC111794015 [Cucurbita pepo subsp. pepo]2.7e-5992.54Show/hide
Query:  MDNSWKPTRPIVFFFDQPRKQSIHFFPIICSTTGNQRVGFCVLLRLSVGIEPKVEGFELMALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQW
        MD SWKPTRPIVFFFDQPRKQS HF   ICSTT NQRVGFCV LRL+VGIEPKVEGFELMALTNFILTVAGVSAVV+LLRSDVKQSASIFRRNVKHIRQW
Subjt:  MDNSWKPTRPIVFFFDQPRKQSIHFFPIICSTTGNQRVGFCVLLRLSVGIEPKVEGFELMALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQW

Query:  LEEESASASKTVEKATKELESKTSHKDIPKDDKH
        LEEESASASKTVEKATKELESKT HKDIPKDDKH
Subjt:  LEEESASASKTVEKATKELESKTSHKDIPKDDKH

XP_038899134.1 uncharacterized protein LOC120086491 [Benincasa hispida]2.7e-2797.33Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDIPKDDKH
        MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELE+KTS KDIPKDDKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDIPKDDKH

TrEMBL top hitse value%identityAlignment
A0A6J1DS71 uncharacterized protein LOC1110234001.1e-2693.33Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDIPKDDKH
        MALTNFILTVAGVSAV+LLLRSDVKQSASIFRRNVKHIRQW+EEESASASKTVEKATKELE+K S KDIPKDDKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDIPKDDKH

A0A6J1FA54 uncharacterized protein LOC1114422023.8e-2796Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDIPKDDKH
        MALTNFILTVAGV AVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELE+KTS KDIPKDDKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDIPKDDKH

A0A6J1J664 uncharacterized protein LOC1114821243.8e-2796Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDIPKDDKH
        MALTNFILTVAGV AVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELE+KTS KDIPKDDKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDIPKDDKH

I1N7U0 Uncharacterized protein3.7e-2284.21Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKAT-KELESKTSHKDIPKDDKH
        M LTNF+LTVAGVSAVVLLLRSDVKQSASIFRRNVKHIR WLEEESA++SKT+EK+T KELESK   KDIPK+DKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKAT-KELESKTSHKDIPKDDKH

I3SQG6 Uncharacterized protein7.5e-2382.67Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDIPKDDKH
        M +TNF+LTVAGVSAVVLLLRSDVKQSASIFRRNVKHIR+WLEEE+ S+SKTVEK+TKELE+K   KDIPK+DKH
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKATKELESKTSHKDIPKDDKH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G14105.1 unknown protein1.6e-1766.22Show/hide
Query:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKA--TKELESKTSHKDIPKD
        M LTNFILTVAGV AVV+LLRSDVKQS ++ RRNVKHIR WLEEES++AS    ++   KE+E K   KDIPK+
Subjt:  MALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASKTVEKA--TKELESKTSHKDIPKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAATTCCTGGAAGCCCACTAGACCAATCGTGTTCTTCTTCGATCAACCTCGCAAGCAATCGATACATTTCTTCCCTATCATTTGCTCCACGACGGGTAACCAGCG
AGTAGGATTCTGTGTTTTGCTTCGTCTGAGTGTTGGAATTGAACCGAAGGTTGAAGGATTTGAATTGATGGCTTTGACGAACTTCATCTTGACGGTGGCTGGAGTTAGTG
CCGTGGTTCTTCTTTTGAGGAGCGATGTGAAACAATCGGCTTCAATCTTCCGGCGCAACGTCAAGCACATCCGCCAGTGGCTCGAAGAAGAATCTGCCTCTGCCTCCAAG
ACTGTGGAGAAAGCAACTAAGGAGCTGGAATCCAAGACTTCTCATAAAGATATTCCCAAAGATGACAAGCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAATTCCTGGAAGCCCACTAGACCAATCGTGTTCTTCTTCGATCAACCTCGCAAGCAATCGATACATTTCTTCCCTATCATTTGCTCCACGACGGGTAACCAGCG
AGTAGGATTCTGTGTTTTGCTTCGTCTGAGTGTTGGAATTGAACCGAAGGTTGAAGGATTTGAATTGATGGCTTTGACGAACTTCATCTTGACGGTGGCTGGAGTTAGTG
CCGTGGTTCTTCTTTTGAGGAGCGATGTGAAACAATCGGCTTCAATCTTCCGGCGCAACGTCAAGCACATCCGCCAGTGGCTCGAAGAAGAATCTGCCTCTGCCTCCAAG
ACTGTGGAGAAAGCAACTAAGGAGCTGGAATCCAAGACTTCTCATAAAGATATTCCCAAAGATGACAAGCATTAA
Protein sequenceShow/hide protein sequence
MDNSWKPTRPIVFFFDQPRKQSIHFFPIICSTTGNQRVGFCVLLRLSVGIEPKVEGFELMALTNFILTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRQWLEEESASASK
TVEKATKELESKTSHKDIPKDDKH