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CmoCh11G016470 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G016470
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationCmo_Chr11:11713454..11715936
RNA-Seq ExpressionCmoCh11G016470
SyntenyCmoCh11G016470
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581070.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]8.6e-2891.04Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCC
        D+GRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSNEA GN AAKNNA  PEENYQYSPMKKWFCC
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCC

KAG6588926.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]3.6e-34100Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCCL
        MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCCL
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCCL

KAG7022694.1 hypothetical protein SDJN02_16428, partial [Cucurbita argyrosperma subsp. argyrosperma]9.5e-27100Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM
        QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM

XP_038883812.1 protein NOI4-like isoform X1 [Benincasa hispida]8.6e-2889.71Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCC
        QDKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSNEA GN  AKNN   PEENYQYSPMKKWFCC
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCC

XP_038883820.1 protein NOI4-like isoform X2 [Benincasa hispida]8.6e-2889.71Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCC
        QDKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSNEA GN  AKNN   PEENYQYSPMKKWFCC
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCC

TrEMBL top hitse value%identityAlignment
A0A0A0LDP9 AvrRpt-cleavage domain-containing protein1.3e-2685.51Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCC
        + DKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSNEA GN AAK+N    EENYQYSPMKKWFCC
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCC

A0A2P5B5J0 RIN4, pathogenic type III effector avirulence factor Avr cleavage site9.9e-2274.03Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASG----NIAAKNNAP--EPEENYQYSPMKKWFCC
        MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSN A+G    N    NN+   +P E Y Y PMKKWFCC
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASG----NIAAKNNAP--EPEENYQYSPMKKWFCC

A0A2P5FBR6 RIN4, pathogenic type III effector avirulence factor Avr cleavage site2.9e-2172.73Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASG----NIAAKNNAP--EPEENYQYSPMKKWFCC
        MASQ+KGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSN A+G    N    NN+   +P E Y Y PMKKWFCC
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASG----NIAAKNNAP--EPEENYQYSPMKKWFCC

A0A5D3E371 RPM1-interacting protein 4-like2.6e-2287.3Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM
        SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSNEA GN AAK+N    EENYQYSPM
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPM

B9SLS6 NOI, putative2.9e-2172.97Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAA---KNNAPEPEENYQYSPMKKWFCC
        M++QDKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSN A G  AA    NN  +P++NYQ    KKWFCC
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAA---KNNAPEPEENYQYSPMKKWFCC

SwissProt top hitse value%identityAlignment
O22633 Protein NOI45.6e-1454.05Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIA------AKNNAPEPEENYQYSPMKKWFCCL
        DKGRPLPKFGEWDVN+PASAEGFTVIF+KAR+EKK+    G+         K+   +P +       KKW CC+
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIA------AKNNAPEPEENYQYSPMKKWFCCL

Q8GYN5 RPM1-interacting protein 45.6e-0637.68Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCC
        S +K   +PKFG+WD NNP+SA+G+T IF+K R E+ S     N++  +  P  + +   +P     CC
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCC

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein3.3e-1758.82Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCCL
        DKGRPLPKFGEWDVN+P+SAEGFTVIF+KARNEKK    S +                 P KKWFCC+
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCCL

AT4G35655.1 RPM1-interacting protein 4 (RIN4) family protein1.2e-1454.29Show/hide
Query:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFC
        MAS    RPLPKFGEWDVN+PA+AEGFTVIFSKA  +KK+  +S      + AP   +     P KKW C
Subjt:  MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFC

AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein2.3e-1560.29Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCC
        Q + RPLPKFGEWDVN+PASAEGFTVIF+KAR++KK+N ASG  A++          Q  P KK FCC
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCC

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein3.0e-1553.33Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIA------AKNNAPEPEENYQYSPMKKWFCCL
        +DKGRPLPKFGEWDVN+PASAEGFTVIF+KAR+EKK+    G+         K+   +P +       KKW CC+
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIA------AKNNAPEPEENYQYSPMKKWFCCL

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein1.0e-1553.16Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQY-----------SPMKKWFC
        +++KG+PLPKFGEWDVNNPASAEGFTVIFSKA +EKK+ +ASG  A  N+   P+ N                  KWFC
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQY-----------SPMKKWFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGCAGGATAAAGGTCGCCCCTTGCCGAAGTTCGGCGAGTGGGATGTCAACAATCCAGCTTCAGCCGAAGGCTTCACAGTAATATTTAGCAAAGCTAGAAATGA
GAAGAAGTCAAATGAGGCTTCTGGGAACATAGCAGCTAAAAACAATGCACCAGAACCGGAAGAGAATTATCAGTATTCTCCCATGAAAAAATGGTTTTGCTGTCTCTGA
mRNA sequenceShow/hide mRNA sequence
CTTCCAACGCCCAATTCTCTTCTTCCTTCTCTCTCGCTCTCTCAGTTTCGTTCTCTGTGCAGAAAGCTTTGTTAATGTATTTTAATGGCATCGCAGGATAAAGGTCGCCC
CTTGCCGAAGTTCGGCGAGTGGGATGTCAACAATCCAGCTTCAGCCGAAGGCTTCACAGTAATATTTAGCAAAGCTAGAAATGAGAAGAAGTCAAATGAGGCTTCTGGGA
ACATAGCAGCTAAAAACAATGCACCAGAACCGGAAGAGAATTATCAGTATTCTCCCATGAAAAAATGGTTTTGCTGTCTCTGAAACTGATAGGGAGCGATGGTGGTGGTG
ACAACAGACATGGTGAAAGAAGGGTAAAGATTTTCCTGATTTGTGAGGGAAATGCAGAATCAAGTAGGGATGTGATGGTTTACTTCCTTTCTCTCTGTTAAGTTTCGCTC
TAATAGAAACTTCAGTTTGTTCATCTCATGTCATGGATGTTGTTGGTTGCAACTTCACCATTCACAAGATTTCTAAACTATTATGTATTTTTCATCTTCTAACTAAAGTA
ACTGCACATATTGTCTGTCAAAAACAAACTATAAGCATCATTATTGTAACGTTTATGACCTTCTTGAGAGCGGAAG
Protein sequenceShow/hide protein sequence
MASQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARNEKKSNEASGNIAAKNNAPEPEENYQYSPMKKWFCCL