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CmoCh11G016480 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G016480
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSuccinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
Genome locationCmo_Chr11:11716737..11719663
RNA-Seq ExpressionCmoCh11G016480
SyntenyCmoCh11G016480
Gene Ontology termsGO:0006099 - tricarboxylic acid cycle (biological process)
GO:0022904 - respiratory electron transport chain (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0045273 - respiratory chain complex II (cellular component)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
GO:0051538 - 3 iron, 4 sulfur cluster binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0008177 - succinate dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsIPR036010 - 2Fe-2S ferredoxin-like superfamily
IPR025192 - Succinate dehydogenase/fumarate reductase N-terminal
IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
IPR017896 - 4Fe-4S ferredoxin-type, iron-sulphur binding domain
IPR012675 - Beta-grasp domain superfamily
IPR009051 - Alpha-helical ferredoxin
IPR006058 - 2Fe-2S ferredoxin, iron-sulphur binding site
IPR004489 - Succinate dehydrogenase/fumarate reductase iron-sulphur protein
IPR001041 - 2Fe-2S ferredoxin-type iron-sulfur binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588927.1 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]4.7e-15999.28Show/hide
Query:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR
        MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPEL+EYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR
Subjt:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR

Query:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
        EGICGSCAMNIDGCNGLACLTKIPSD SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
Subjt:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC

Query:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG
        PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG
Subjt:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG

KAG7022695.1 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-15898.91Show/hide
Query:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR
        MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPEL+EYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR
Subjt:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR

Query:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
        EGICGSCAMNIDGCNGLACLTKIPSD SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
Subjt:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC

Query:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLV
        PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQL+
Subjt:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLV

XP_022928182.1 succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Cucurbita moschata]1.9e-160100Show/hide
Query:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR
        MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR
Subjt:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR

Query:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
        EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
Subjt:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC

Query:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG
        PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG
Subjt:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG

XP_022989559.1 succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Cucurbita maxima]3.4e-15798.19Show/hide
Query:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR
        MATGILRRAISRVSAT PSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPEL+EYKIDLK+CGPMVLDALIKIKNEIDPTLTFRRSCR
Subjt:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR

Query:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
        EGICGSCAMNIDGCNGLACLTKIPSD SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
Subjt:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC

Query:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG
        PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQ+IKRLQLVG
Subjt:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG

XP_023530873.1 succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial-like [Cucurbita pepo subsp. pepo]1.1e-15898.92Show/hide
Query:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR
        MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPEL+EYKIDLK+CGPMVLDALIKIKNEIDPTLTFRRSCR
Subjt:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR

Query:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
        EGICGSCAMNIDGCNGLACLTKIPSD SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
Subjt:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC

Query:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG
        PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG
Subjt:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG

TrEMBL top hitse value%identityAlignment
A0A6J1DJI7 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial6.7e-15193.86Show/hide
Query:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR
        MATG+LRR ISRVSATP SRF+RIRAHASEA AQ+VEQKAA +S LKTFAIYRWNPDSPSKPEL+EYKIDLKECGPMVLDALIKIKNEIDP+LTFRRSCR
Subjt:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR

Query:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
        EGICGSCAMNIDGCNGLACLTKIPS  SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKS PSVPGKEILQSK+DRAKLDGMYECILCACCSTSC
Subjt:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC

Query:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG
        PSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIK LQLVG
Subjt:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG

A0A6J1EJ68 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial9.3e-161100Show/hide
Query:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR
        MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR
Subjt:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR

Query:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
        EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
Subjt:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC

Query:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG
        PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG
Subjt:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG

A0A6J1F9C7 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial3.9e-15193.5Show/hide
Query:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR
        MA+GILRRAI+RVSAT PSRF+RIRAHAS A AQ+VEQKAA S+ LKTFAIYRWNPDSPSKPEL+EYKIDLKECGPMVLDALIKIKNE+DPTLTFRRSCR
Subjt:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR

Query:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
        EGICGSCAMNIDGCNGLACLTKIPS  SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEP VPGKEILQSK+DRAKLDGMYECILCACCSTSC
Subjt:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC

Query:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG
        PSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIK+LQLVG
Subjt:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG

A0A6J1J748 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial1.0e-15193.5Show/hide
Query:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR
        MA+GILRRAI+RVSATPPSRF+RIRAHA+ A AQ+VEQKAA S+ LKTFAIYRWNPDSPSKPEL+EYKIDLKECGPMVLDALIKIKNE+DPTLTFRRSCR
Subjt:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR

Query:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
        EGICGSCAMNIDGCNGLACLTKIPS  SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEP VPGKEILQSK+DRAKLDGMYECILCACCSTSC
Subjt:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC

Query:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG
        PSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIK+LQLVG
Subjt:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG

A0A6J1JPN7 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial1.6e-15798.19Show/hide
Query:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR
        MATGILRRAISRVSAT PSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPEL+EYKIDLK+CGPMVLDALIKIKNEIDPTLTFRRSCR
Subjt:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCR

Query:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
        EGICGSCAMNIDGCNGLACLTKIPSD SSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC
Subjt:  EGICGSCAMNIDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSC

Query:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG
        PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQ+IKRLQLVG
Subjt:  PSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG

SwissProt top hitse value%identityAlignment
P21913 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial7.2e-9465.84Show/hide
Query:  QKVEQKAAVSSTLKTFAIYRWNPD-SPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSD--PSST
        ++ +  AA +  +KTFAIYRW+PD +  KP ++ YK+DL +CGPMVLDALIKIKNEID TLTFRRSCREGICGSCAMNI+G N LAC  +I +D    S 
Subjt:  QKVEQKAAVSSTLKTFAIYRWNPD-SPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSD--PSST

Query:  ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEF
        I PLPHM+VIKDLV D++NFY QYKSIEP+LK+K E     ++ LQS +DR KLDG+YECILCACCSTSCPSYWWN + YLGPA L+ A RW+ DSRDEF
Subjt:  ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEF

Query:  TKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRL
        T+ERL  + D F LYRCHTI+NC + CPKGLNPGK I  IK++
Subjt:  TKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRL

Q8LB02 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial1.9e-12677.5Show/hide
Query:  MATGILRRAISRVSA--TPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRS
        MA G++ R +   S+  +  +R +  R  ++ + AQ         ++LKTF IYRWNPD+P KPEL++YKIDLK+CGPMVLDALIKIKNE+DP+LTFRRS
Subjt:  MATGILRRAISRVSA--TPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRS

Query:  CREGICGSCAMNIDGCNGLACLTKIPS-DPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCS
        CREGICGSCAMNIDGCNGLACLTKI S    +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+  SVPGKEILQSK+DRAKLDGMYECILCACCS
Subjt:  CREGICGSCAMNIDGCNGLACLTKIPS-DPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCS

Query:  TSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG
        TSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAI+DEFKLYRCHTILNCARACPKGLNPGKQI +IK+LQ  G
Subjt:  TSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG

Q8LBZ7 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial7.9e-12577.34Show/hide
Query:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQ---KVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRR
        MA+G++ R +    +   +    I A  +  GA+   K        S LKTF IYRWNPD+P KPEL+ Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRR
Subjt:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQ---KVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRR

Query:  SCREGICGSCAMNIDGCNGLACLTKIPSDPS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACC
        SCREGICGSCAMNIDGCNGLACLTKI  + S +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+  SVP KEILQSK+DRAKLDGMYECILCACC
Subjt:  SCREGICGSCAMNIDGCNGLACLTKIPSDPS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACC

Query:  STSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQ
        STSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAI+DEFKLYRCHTILNCARACPKGLNPGKQI +IK+LQ
Subjt:  STSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQ

Q9S827 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial2.0e-11572.76Show/hide
Query:  ATGILRR---AISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS-KPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRR
        A  +LRR   A + +S    SR +  + H+S         KA  ++  KTF+IYRW+PDSPS KP L++YK+DL +CGPMVLD L+KIKNE DP+LTFRR
Subjt:  ATGILRR---AISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPS-KPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRR

Query:  SCREGICGSCAMNIDGCNGLACLTKIPSDPS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACC
        SCREGICGSCAMNIDG NGLACLTKI S  S STI+PLPHMFVIKDLVVDMTNFYNQYKS+EPWLKRK  P  PGKEI Q+K DRAKLDGMYECILCACC
Subjt:  SCREGICGSCAMNIDGCNGLACLTKIPSDPS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACC

Query:  STSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQL
        STSCPSYWWNPE YLGPAALLHANRWI DSRD+FTKERL++INDEFKLYRCHTI NC  ACPKGLNP K I  IK+LQL
Subjt:  STSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQL

Q9YHT2 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial5.5e-9462.31Show/hide
Query:  PSRFLRI---------RAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSP-SKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSC
        P+RFLR            H    GAQ     AA +S +K F+IYRW+PD P  KP ++ Y++DL +CGPMVLDALIKIKNE+D TLTFRRSCREGICGSC
Subjt:  PSRFLRI---------RAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSP-SKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSC

Query:  AMNIDGCNGLACLTKIPSDPSST--ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSCPSYWW
        AMNI G N LAC  KI  D S T  I PLPHM+V+KDLV D++NFY QYKSIEP+LK+K E     ++ LQS +DR KLDG+YECILCACCSTSCPSYWW
Subjt:  AMNIDGCNGLACLTKIPSDPSST--ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSCPSYWW

Query:  NPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRL
        N + YLGPA L+ A RW+ DSRD++T+ERL  + D F LYRCHTI+NC R CPKGLNPGK I  IK++
Subjt:  NPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRL

Arabidopsis top hitse value%identityAlignment
AT3G27380.1 succinate dehydrogenase 2-15.6e-12677.34Show/hide
Query:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQ---KVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRR
        MA+G++ R +    +   +    I A  +  GA+   K        S LKTF IYRWNPD+P KPEL+ Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRR
Subjt:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQ---KVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRR

Query:  SCREGICGSCAMNIDGCNGLACLTKIPSDPS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACC
        SCREGICGSCAMNIDGCNGLACLTKI  + S +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+  SVP KEILQSK+DRAKLDGMYECILCACC
Subjt:  SCREGICGSCAMNIDGCNGLACLTKIPSDPS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACC

Query:  STSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQ
        STSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAI+DEFKLYRCHTILNCARACPKGLNPGKQI +IK+LQ
Subjt:  STSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQ

AT3G27380.2 succinate dehydrogenase 2-15.6e-12677.34Show/hide
Query:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQ---KVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRR
        MA+G++ R +    +   +    I A  +  GA+   K        S LKTF IYRWNPD+P KPEL+ Y+IDLK+CGPMVLDALIKIKNE+DP+LTFRR
Subjt:  MATGILRRAISRVSATPPSRFLRIRAHASEAGAQ---KVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRR

Query:  SCREGICGSCAMNIDGCNGLACLTKIPSDPS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACC
        SCREGICGSCAMNIDGCNGLACLTKI  + S +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+  SVP KEILQSK+DRAKLDGMYECILCACC
Subjt:  SCREGICGSCAMNIDGCNGLACLTKIPSDPS-STITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACC

Query:  STSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQ
        STSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAI+DEFKLYRCHTILNCARACPKGLNPGKQI +IK+LQ
Subjt:  STSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQ

AT5G40650.1 succinate dehydrogenase 2-21.3e-12777.5Show/hide
Query:  MATGILRRAISRVSA--TPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRS
        MA G++ R +   S+  +  +R +  R  ++ + AQ         ++LKTF IYRWNPD+P KPEL++YKIDLK+CGPMVLDALIKIKNE+DP+LTFRRS
Subjt:  MATGILRRAISRVSA--TPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRS

Query:  CREGICGSCAMNIDGCNGLACLTKIPS-DPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCS
        CREGICGSCAMNIDGCNGLACLTKI S    +TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+  SVPGKEILQSK+DRAKLDGMYECILCACCS
Subjt:  CREGICGSCAMNIDGCNGLACLTKIPS-DPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCS

Query:  TSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG
        TSCPSYWWNPESYLGPAALLHANRWISDSRDE+TKERLEAI+DEFKLYRCHTILNCARACPKGLNPGKQI +IK+LQ  G
Subjt:  TSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG

AT5G65165.1 succinate dehydrogenase 2-34.4e-8662.3Show/hide
Query:  EQKAAVSSTLKTFAIYRWNPDSP-SKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSDPS--STITP
        E++       K F IYRWNPD P SKP L+ + +DL  CGPMVLD L KIK E D +L++RRSCREGICGSC+MNIDG N +ACL  I  + S  + ITP
Subjt:  EQKAAVSSTLKTFAIYRWNPDSP-SKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSDPS--STITP

Query:  LPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKE
        LPHM+VIKDLVVD+TNFY QYKS+EPWLK +  P   G+E  QS +DR KLDG+YECILCACC+TSCPSYWWNPE + GPAALL A RWISDSRDE+ +E
Subjt:  LPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEFTKE

Query:  RLEAIND-EFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLV
        RL+AI + E K+YRC  I NC   CPKGLNP   I  +K   L+
Subjt:  RLEAIND-EFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGAATCCTGAGGAGGGCAATATCTAGGGTTTCTGCAACTCCACCTTCAAGATTCCTTCGAATTCGAGCTCACGCTTCCGAAGCCGGAGCGCAGAAAGTGGA
GCAAAAAGCAGCCGTCTCTTCAACGCTCAAGACGTTCGCTATCTACCGATGGAACCCCGACAGCCCTTCCAAACCAGAGCTTGAGGAGTACAAGATCGATCTAAAAGAAT
GCGGTCCTATGGTGCTCGATGCTCTAATCAAAATCAAGAACGAGATCGATCCGACTCTGACCTTCCGCCGCTCGTGTCGAGAGGGGATCTGCGGGTCCTGTGCGATGAAC
ATCGATGGATGTAATGGTTTGGCTTGCTTGACGAAGATTCCATCCGATCCTTCTTCGACGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGATAT
GACGAATTTTTATAACCAGTATAAGAGTATTGAGCCGTGGTTGAAGAGGAAGAGCGAGCCGTCTGTGCCGGGGAAGGAGATTCTTCAGAGTAAGCAAGATAGGGCTAAGT
TGGATGGGATGTATGAATGTATTTTGTGTGCATGTTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCGGAGTCATATCTTGGACCAGCTGCTTTGCTCCATGCCAAT
AGGTGGATAAGTGATAGCCGTGACGAATTCACCAAGGAGCGACTCGAGGCAATAAACGATGAATTCAAGCTCTATCGGTGTCATACCATACTCAACTGCGCCCGTGCCTG
TCCGAAGGGTTTGAACCCTGGAAAACAGATTCAAAATATCAAACGCCTCCAGCTCGTGGGCTGA
mRNA sequenceShow/hide mRNA sequence
AAAGCCACTCTTCCTTCTTCCTACTCCAGATAAGTTCTCTGTTTCTCTCTCTCTCTCCATTTCTCTCTCTTCGAGGCACAACAATGGCGACTGGAATCCTGAGGAGGGCA
ATATCTAGGGTTTCTGCAACTCCACCTTCAAGATTCCTTCGAATTCGAGCTCACGCTTCCGAAGCCGGAGCGCAGAAAGTGGAGCAAAAAGCAGCCGTCTCTTCAACGCT
CAAGACGTTCGCTATCTACCGATGGAACCCCGACAGCCCTTCCAAACCAGAGCTTGAGGAGTACAAGATCGATCTAAAAGAATGCGGTCCTATGGTGCTCGATGCTCTAA
TCAAAATCAAGAACGAGATCGATCCGACTCTGACCTTCCGCCGCTCGTGTCGAGAGGGGATCTGCGGGTCCTGTGCGATGAACATCGATGGATGTAATGGTTTGGCTTGC
TTGACGAAGATTCCATCCGATCCTTCTTCGACGATTACGCCGCTGCCTCATATGTTCGTGATCAAGGATCTGGTGGTGGATATGACGAATTTTTATAACCAGTATAAGAG
TATTGAGCCGTGGTTGAAGAGGAAGAGCGAGCCGTCTGTGCCGGGGAAGGAGATTCTTCAGAGTAAGCAAGATAGGGCTAAGTTGGATGGGATGTATGAATGTATTTTGT
GTGCATGTTGTAGTACATCGTGCCCCAGCTATTGGTGGAACCCGGAGTCATATCTTGGACCAGCTGCTTTGCTCCATGCCAATAGGTGGATAAGTGATAGCCGTGACGAA
TTCACCAAGGAGCGACTCGAGGCAATAAACGATGAATTCAAGCTCTATCGGTGTCATACCATACTCAACTGCGCCCGTGCCTGTCCGAAGGGTTTGAACCCTGGAAAACA
GATTCAAAATATCAAACGCCTCCAGCTCGTGGGCTGAGCCGAAGTTTCGAGGTACACGAAACACAATAATGTTCTTTTTCATTCAGTTATGGAATATCTTGTGAGAACTC
ATGAGCAATGTGATTTTGATCGAATAACTTGTGGATCATTGACTTTCCACACATTCTGTACTTAAGATTTGATCTTTAGTATTTATCTGTCTCCAAATAAATGTTGACAG
AAACCTCCTGGCTTCTCGAGTTGTCGTACCACGATCATCCTTTATTCTTTTTATTTGATAAAAAAAACTATGCTCCGATTTCCTGGTTCGTTCGATCACCTTCCTTTGTC
TAAACTGCTATAGTTTAACCATCCATCTTGTAACGGCCCAGGCCCACCGCTAGCAGATATTATTCTCTTTTGGTTTTTCCTTTCAAC
Protein sequenceShow/hide protein sequence
MATGILRRAISRVSATPPSRFLRIRAHASEAGAQKVEQKAAVSSTLKTFAIYRWNPDSPSKPELEEYKIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMN
IDGCNGLACLTKIPSDPSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPSVPGKEILQSKQDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHAN
RWISDSRDEFTKERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIQNIKRLQLVG