; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G016540 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G016540
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRas-related protein Rab-2A
Genome locationCmo_Chr11:11757940..11762215
RNA-Seq ExpressionCmoCh11G016540
SyntenyCmoCh11G016540
Gene Ontology termsGO:0030100 - regulation of endocytosis (biological process)
GO:0005768 - endosome (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450002.1 PREDICTED: ras-related protein RABB1b [Cucumis melo]8.7e-10387.11Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP+KLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCC
        KVGYGRPQGPSGARDGAVAQRGGCC
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCC

XP_022928185.1 ras-related protein RABB1b [Cucurbita moschata]3.0e-10387.61Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCCS
        KVGYGRPQGPSGARDGAVAQRGGCCS
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCCS

XP_022989237.1 ras-related protein RABB1b [Cucurbita maxima]8.7e-10387.17Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCCS
        KVGYGRPQGPSGARDG VAQRGGCCS
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCCS

XP_023531811.1 ras-related protein RABB1b [Cucurbita pepo subsp. pepo]1.9e-10286.73Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCCS
        KVGYGRPQGPSG+RDG VAQRGGCCS
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCCS

XP_038894253.1 ras-related protein RABB1b [Benincasa hispida]2.5e-10286.67Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP+KLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCC
        KVGYGRPQGPSGARDG VAQRGGCC
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCC

TrEMBL top hitse value%identityAlignment
A0A1S3BMP4 ras-related protein RABB1b4.2e-10387.11Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP+KLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCC
        KVGYGRPQGPSGARDGAVAQRGGCC
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCC

A0A5A7T4U5 Ras-related protein RABB1b4.2e-10387.11Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP+KLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCC
        KVGYGRPQGPSGARDGAVAQRGGCC
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCC

A0A6A1VG46 Ras-related protein RABB1b6.1e-10285.33Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP+KLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHANPNM+IML+GNK+DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFI+TAAKILQNIQEGVFDVSNESSGI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCC
        KVGYGRPQGPSGARDGAVAQRGGCC
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCC

A0A6J1EQZ0 ras-related protein RABB1b1.5e-10387.61Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCCS
        KVGYGRPQGPSGARDGAVAQRGGCCS
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCCS

A0A6J1JF93 ras-related protein RABB1b4.2e-10387.17Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCCS
        KVGYGRPQGPSGARDG VAQRGGCCS
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCCS

SwissProt top hitse value%identityAlignment
P49103 Ras-related protein Rab-2-A1.7e-8572.57Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +P+KLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHAN NM+IMLVGNK DL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA  I + IQ+GVFDVSNES GI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCCS
        KVGY  P    GA  G+ +Q GGCCS
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCCS

P49104 Ras-related protein Rab-2-B3.5e-8672.57Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +P+KLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHAN NM+IMLVGNK DL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA  I + IQ+GVFDVSNES GI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCCS
        KVGY  P G SG    + +Q GGCCS
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCCS

P92963 Ras-related protein RABB1c4.7e-9175.11Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +P+KLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHAN NM+IML+GNK DLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQ+GVFDVSNES GI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCC
        KVGYG   GPSG RDG+ +Q GGCC
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCC

Q38922 Ras-related protein RABB1b2.3e-9879.56Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT+DGRP+KLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHANPNMSIML+GNK DLAH+RAVSKEEG+QFAKE+GLLFLEASARTAQNVEEAFI+TAAKILQNIQ+GVFDVSNESSGI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCC
        K+GYGR QG +G RDG ++Q GGCC
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCC

Q39570 GTP-binding protein YPTC41.4e-8269.74Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ +KLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHANPNM+IML+GNK DL HRRAV+ EEGEQFAKE+GL+FLE SARTA NVEEAFI TA +I + IQ+GVFDVSNES GI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQ-GPSGAR--DGAVAQRGGCC
        KVGYG    GP   +  +G  A+   CC
Subjt:  KVGYGRPQ-GPSGAR--DGAVAQRGGCC

Arabidopsis top hitse value%identityAlignment
AT1G06400.1 Ras-related small GTP-binding family protein2.0e-4141.07Show/hide
Query:  YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLVYD
        YDYLFK ++IGD+GVGKS LL +FT   F      TIGVEF  +   ++G+ VK QIWDT      R   +  +R               GA GALL+YD
Subjt:  YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLVYD

Query:  ITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGIKV
        +TR  TF + A WL + R H +PN+ +ML+GNK DL H  AV  EE + FA+   L F+E SA  A NVE AF +   +I + + +   D   ES+ +  
Subjt:  ITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGIKV

Query:  GYGRPQGPSGARDGAVAQRGGCCS
          G+ +  +   DG+V +R GCCS
Subjt:  GYGRPQGPSGARDGAVAQRGGCCS

AT4G17160.1 RAB GTPase homolog B1A5.5e-7161.06Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSY Y FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ +TID +P+KLQIWDT      R                +  S + G AG LLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLE+ARQHA+ NM+ ML+GNK DL  +R VS EEGEQFA+E+GL+F+EASA+TA NVEEAF++TAA I + IQ+GV D +NE    
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVA-QRGGCC
            G   GP G +D + + QR GCC
Subjt:  KVGYGRPQGPSGARDGAVA-QRGGCC

AT4G17170.1 RAB GTPase homolog B1C3.3e-9275.11Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +P+KLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHAN NM+IML+GNK DLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQ+GVFDVSNES GI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCC
        KVGYG   GPSG RDG+ +Q GGCC
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCC

AT4G35860.1 GTP-binding 21.6e-9979.56Show/hide
Query:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV
        MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT+DGRP+KLQIWDT      R                +  S + GAAGALLV
Subjt:  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLV

Query:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI
        YDITRRETFNHLASWLEDARQHANPNMSIML+GNK DLAH+RAVSKEEG+QFAKE+GLLFLEASARTAQNVEEAFI+TAAKILQNIQ+GVFDVSNESSGI
Subjt:  YDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGI

Query:  KVGYGRPQGPSGARDGAVAQRGGCC
        K+GYGR QG +G RDG ++Q GGCC
Subjt:  KVGYGRPQGPSGARDGAVAQRGGCC

AT4G35860.2 GTP-binding 22.1e-7074.3Show/hide
Query:  MVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSK
        MVT+DGRP+KLQIWDT      R                +  S + GAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIML+GNK DLAH+RAVSK
Subjt:  MVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSK

Query:  EEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGIKVGYGRPQGPSGARDGAVAQRGGCC
        EEG+QFAKE+GLLFLEASARTAQNVEEAFI+TAAKILQNIQ+GVFDVSNESSGIK+GYGR QG +G RDG ++Q GGCC
Subjt:  EEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGIKVGYGRPQGPSGARDGAVAQRGGCC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTACGATTACCTCTTCAAGTACATCATCATCGGCGATACGGGTGTTGGGAAATCTTGCTTGTTGTTGCAATTCACGGACAAGAGGTTTCAGCCTGTGCACGATCT
AACTATTGGCGTTGAGTTTGGTGCTCGTATGGTCACCATCGATGGCCGACCTGTTAAGCTTCAGATATGGGATACTGGGAAAGTCAGTTTGCTAAGGCTATTTGTGACAG
ATTCTTGGAGACTTTTAGTGACTGATTCTTGGAGGCTTGTGGAGAGTTCTTGGGAAGGAGCAGCTGGTGCTCTCTTAGTTTATGACATTACCAGGAGGGAGACATTCAAT
CACTTGGCAAGCTGGTTGGAGGACGCTCGGCAACATGCAAATCCCAACATGTCAATTATGCTTGTAGGGAACAAGGCTGATCTCGCTCATCGAAGAGCTGTAAGCAAGGA
AGAGGGAGAACAATTTGCAAAAGAAAATGGGCTCTTATTCTTAGAGGCATCTGCTAGAACGGCTCAAAATGTTGAGGAGGCATTCATAAAGACTGCAGCTAAAATACTTC
AAAATATTCAAGAAGGTGTCTTTGATGTATCCAATGAGTCGTCTGGGATCAAGGTCGGTTACGGGCGCCCTCAAGGGCCATCGGGGGCAAGGGATGGAGCAGTTGCACAG
AGAGGTGGATGCTGTAGCTAA
mRNA sequenceShow/hide mRNA sequence
AAACCTCACTTTTAAACCAAATTTCCCTCGGCCTTCGGCGCTGGCGGGGCCATTTTCACATTGCGTGTCGGTCATTTTCACGTCAAAAACCTTCTTCCCTTCGCTAAATT
CCCTCTCCAAATCACATTCTCTTTGAATCTTTCCGTTTCCATATCAATTTCCGAACTCATATCGCCGCTGATCTGATTTCATCTCTGTGTTTAGTTATGTCGTACGATTA
CCTCTTCAAGTACATCATCATCGGCGATACGGGTGTTGGGAAATCTTGCTTGTTGTTGCAATTCACGGACAAGAGGTTTCAGCCTGTGCACGATCTAACTATTGGCGTTG
AGTTTGGTGCTCGTATGGTCACCATCGATGGCCGACCTGTTAAGCTTCAGATATGGGATACTGGGAAAGTCAGTTTGCTAAGGCTATTTGTGACAGATTCTTGGAGACTT
TTAGTGACTGATTCTTGGAGGCTTGTGGAGAGTTCTTGGGAAGGAGCAGCTGGTGCTCTCTTAGTTTATGACATTACCAGGAGGGAGACATTCAATCACTTGGCAAGCTG
GTTGGAGGACGCTCGGCAACATGCAAATCCCAACATGTCAATTATGCTTGTAGGGAACAAGGCTGATCTCGCTCATCGAAGAGCTGTAAGCAAGGAAGAGGGAGAACAAT
TTGCAAAAGAAAATGGGCTCTTATTCTTAGAGGCATCTGCTAGAACGGCTCAAAATGTTGAGGAGGCATTCATAAAGACTGCAGCTAAAATACTTCAAAATATTCAAGAA
GGTGTCTTTGATGTATCCAATGAGTCGTCTGGGATCAAGGTCGGTTACGGGCGCCCTCAAGGGCCATCGGGGGCAAGGGATGGAGCAGTTGCACAGAGAGGTGGATGCTG
TAGCTAATTGTGAACCAAAGAAGTAGTAGTATTGTATATGATGAAGAAGTGAACCCTTTTGTGCAAGTCGTTTTACTCTTTGTGCAAACTGCCATGATTAAGTTTCTTCT
TTGTTGTGTATCCCTTTTAAAAAAACATTGAATGTACAGTGCCTCAGAACCCTTACTTGGCAAAACTATTACTTTGCTGACTCTCAAAGCAATTGCTTGACAATATTTTG
CTCTGATTCTGTATTTCTGGTCTTCAATTGGGGGGATCGTTACACCTCACGATTTTAAAAT
Protein sequenceShow/hide protein sequence
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIWDTGKVSLLRLFVTDSWRLLVTDSWRLVESSWEGAAGALLVYDITRRETFN
HLASWLEDARQHANPNMSIMLVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESSGIKVGYGRPQGPSGARDGAVAQ
RGGCCS