; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G016640 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G016640
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionheterogeneous nuclear ribonucleoprotein 1-like
Genome locationCmo_Chr11:11807463..11812153
RNA-Seq ExpressionCmoCh11G016640
SyntenyCmoCh11G016640
Gene Ontology termsGO:0006378 - mRNA polyadenylation (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0048576 - positive regulation of short-day photoperiodism, flowering (biological process)
GO:0048578 - positive regulation of long-day photoperiodism, flowering (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003730 - mRNA 3'-UTR binding (molecular function)
GO:0097157 - pre-mRNA intronic binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588940.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-20998.97Show/hide
Query:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
        DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
Subjt:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
        AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA

Query:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSR--GGGGGGGGGGYDGAGSTPTGRYHPYGR
        RYGAGFSRGYDLRGGYGGPDESYS YNSGGAPNTGGYAGSY+MGIGAGYPAGGRGSIYGSR  GGGGGGGGGGYDGAGSTPTGRYHPYGR
Subjt:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSR--GGGGGGGGGGYDGAGSTPTGRYHPYGR

KAG7022708.1 Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-20797.94Show/hide
Query:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDR SHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
        DKVIEDSH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
Subjt:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
        AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA

Query:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR
        RYGAGFSRGYDLRGGYGGPDESYS YNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSR     GGGGGYDGAGSTPTGRYHPYGR
Subjt:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR

XP_022928542.1 heterogeneous nuclear ribonucleoprotein A3-like [Cucurbita moschata]3.1e-212100Show/hide
Query:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
        DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
Subjt:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
        AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA

Query:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR
        RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR
Subjt:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR

XP_022989120.1 heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima]1.4e-20496.65Show/hide
Query:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMD KVNDGVTNGEHDDPKTSNHEDDGSRHDR SHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
        DKVIEDSHIINGK VEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
Subjt:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
        AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGG GYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA

Query:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR
        RYG+GFSRGYDLRGGYGGPDESYS YN+GGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSR     GGGGGYDGAGSTP+GRYHPYGR
Subjt:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR

XP_023530403.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita pepo subsp. pepo]2.7e-20898.71Show/hide
Query:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDR SHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
        DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
Subjt:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
        AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA

Query:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR
        RYGAGFSRGYDLRGGYGGPDESYS YNSGGAPNTGGYAG YDMGIGAGYPAGGRGSIYGSR GGGGGGGGGYDGAGSTP+GRYHPYGR
Subjt:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR

TrEMBL top hitse value%identityAlignment
A0A0A0LG75 Uncharacterized protein2.8e-18789.69Show/hide
Query:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK ND  TNGEH+D K  NH+DDGSRHD  SHGDGASAGKIFVGGLPRETTSAQFV HFG+YGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
        DKVIED+HIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYG V+EHQIMRDHSTSRSRGFGFITFETEQAVD+LLANGNRLE 
Subjt:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
        AGSQVEIKKAEPKKANPPPAPSKR+HDSRPSYSG YGDAYGEFGGGGYGG FRAGGPYGARG   GGYGGYGG+DFSGYGMYGT  +GAYREDPSMGYSA
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA

Query:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR
        RYGA FSRGYD RGGYGGPDESY  YNSGGAP+TGGYAGSYDMG+G GY AGGRGS YGSR  GGGGGGGGYDGAGS P+GRYHPYGR
Subjt:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR

A0A6J1EK86 heterogeneous nuclear ribonucleoprotein A3-like1.5e-212100Show/hide
Query:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
        DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
Subjt:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
        AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA

Query:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR
        RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR
Subjt:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR

A0A6J1F7E2 heterogeneous nuclear ribonucleoprotein 14.6e-19090.08Show/hide
Query:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK ND  TNGEH+D K  NH+DDGSRHD  SHGDGASAGKIFVGGLPRETTSAQFV HFG+YGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
        DKVIED+HIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEV+EHQIMRDHSTSRSRGFGFITFETEQAVD+LLANGNRLE 
Subjt:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARG   GGYGGYGG+DFSGYGMYGT  IGAYREDPSMGYSA
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA

Query:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSR-----GGGGGGGGGGYDGAGSTPTGRYHPYGR
        RYGAGFSRGYD RGGYGGPDESY  YNS  APNTGGYAGSYDMGIG GYP+GGRGS YGSR     GGGGGGGGGGYDGAGS P+GRYHPYGR
Subjt:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSR-----GGGGGGGGGGYDGAGSTPTGRYHPYGR

A0A6J1J2Y6 heterogeneous nuclear ribonucleoprotein 16.1e-19090.28Show/hide
Query:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMDSK ND  TNGEH+D K  NH+DDGSRHD  SHGDGASAGKIFVGGLPRETTSAQFV HFG+YGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
        DKVIED+HIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEV+EHQIMRDHSTSRSRGFGFITFETEQAVD+LLANGNRLE 
Subjt:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
        AGSQVEIKKAEPKK+NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARG   GGYGGYGG+DFSGYGMYGT  IGAYREDPSMGYSA
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA

Query:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSR---GGGGGGGGGGYDGAGSTPTGRYHPYGR
        RYGAGFSRGYD RGGYGGPDESY  YNS  APNTGGYAGSYDMGIG GYP+GGRGS YGSR   GGGGGGGGGGYDGAGS P+GRYHPYGR
Subjt:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSR---GGGGGGGGGGYDGAGSTPTGRYHPYGR

A0A6J1JLH8 heterogeneous nuclear ribonucleoprotein 1-like6.7e-20596.65Show/hide
Query:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
        MSENSMD KVNDGVTNGEHDDPKTSNHEDDGSRHDR SHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV
Subjt:  MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVV

Query:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
        DKVIEDSHIINGK VEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF
Subjt:  DKVIEDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEF

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
        AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGG GYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSA

Query:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR
        RYG+GFSRGYDLRGGYGGPDESYS YN+GGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSR     GGGGGYDGAGSTP+GRYHPYGR
Subjt:  RYGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR

SwissProt top hitse value%identityAlignment
P09651 Heterogeneous nuclear ribonucleoprotein A15.5e-3135.61Show/hide
Query:  KIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DSHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT
        K+F+GGL  ETT     +HF ++G +TD V+M+D  T   RGFGFVTYA    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIE-DSHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT

Query:  SVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY---
          +E   RD+F QYG+++  +IM D  + + RGF F+TF+   +VD+++         G   E++KA  K+     + S+R      ++ GG G  +   
Subjt:  SVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAY---

Query:  ------GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSARYGAGFSRGYDLRG-GYGGPDESYSTYNSGGAPN
              G F G G  GG R GG YG  G  Y G+G  GG    G G                G S  YG+G  +GY  +G GYGG   SY +YN+GG   
Subjt:  ------GEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSARYGAGFSRGYDLRG-GYGGPDESYSTYNSGGAPN

Query:  TGGYAGSYDMGIGAGYPAGG------------RGSIYGSRGGGGGGGGGGY
         GG +GS + G G  Y   G            +G  +G R  G  GGGG Y
Subjt:  TGGYAGSYDMGIGAGYPAGG------------RGSIYGSRGGGGGGGGGGY

P51968 Heterogeneous nuclear ribonucleoprotein A3 homolog 13.6e-3034.67Show/hide
Query:  KIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVD-KVIEDSHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT
        K+F+GGL  ETT      HF ++G++TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S+        KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVD-KVIEDSHIINGKQVEIKRTIPKGSSS--SRDFKTKKIFVGGIPT

Query:  SVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSK-------RYHDSRPSYSGGY
          +E   RD+   YG+++  ++M D  + + RGF F+TF+    VD+++         G   E+KKA  K+     +  +        +     +Y GG 
Subjt:  SVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSK-------RYHDSRPSYSGGY

Query:  GDAYGEFGGGGY-------GGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSARYGAGFSRGYDLRGGYGGPDESYSTYNSG
        G  +G  GGGG+       GGG R GG YG  G  Y G+GG GG+   G G YG    G      + G     G G   GY+  G +GG   +Y+ + + 
Subjt:  GDAYGEFGGGGY-------GGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSARYGAGFSRGYDLRGGYGGPDESYSTYNSG

Query:  GAPNTGGY----AGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDG
        G      Y     GS+      G  +G  G  YGS  GGGGGGGG Y G
Subjt:  GAPNTGGY----AGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDG

Q6URK4 Heterogeneous nuclear ribonucleoprotein A31.2e-3038.42Show/hide
Query:  KIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDSHIINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT
        K+F+GGL  ETT      HF ++G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDSHIINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT

Query:  SVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEF
          +E   RD+F +YG+++  ++M D  + + RGF F+TF+    VD+++         G   E+KKA  K+     A S+R    R   SG +    G F
Subjt:  SVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEF

Query:  GGGGYGGGFRAGGPYGARGGSYGGYGG----YGGSDFSGYGMYGTSSIGAYREDPSMGYSAR--YGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGY
        GGG  GG F  GG +G RGG  GG GG    YGG D  GY  +G    G Y   P  GYS+R  YG G     +  GGYGG    Y  YN GG    G Y
Subjt:  GGGGYGGGFRAGGPYGARGGSYGGYGG----YGGSDFSGYGMYGTSSIGAYREDPSMGYSAR--YGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGY

Query:  AG--------------SYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGS
         G                + G   G   GGR S  GS  GGG G GGG  G GS
Subjt:  AG--------------SYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGS

Q8BG05 Heterogeneous nuclear ribonucleoprotein A31.2e-3038.42Show/hide
Query:  KIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDSHIINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT
        K+F+GGL  ETT      HF ++G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI-EDSHIINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT

Query:  SVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEF
          +E   RD+F +YG+++  ++M D  + + RGF F+TF+    VD+++         G   E+KKA  K+     A S+R    R   SG +    G F
Subjt:  SVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEF

Query:  GGGGYGGGFRAGGPYGARGGSYGGYGG----YGGSDFSGYGMYGTSSIGAYREDPSMGYSAR--YGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGY
        GGG  GG F  GG +G RGG  GG GG    YGG D  GY  +G    G Y   P  GYS+R  YG G     +  GGYGG    Y  YN GG    G Y
Subjt:  GGGGYGGGFRAGGPYGARGGSYGGYGG----YGGSDFSGYGMYGTSSIGAYREDPSMGYSAR--YGAGFSRGYDLRGGYGGPDESYSTYNSGGAPNTGGY

Query:  AG--------------SYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGS
         G                + G   G   GGR S  GS  GGG G GGG  G GS
Subjt:  AG--------------SYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGS

Q8W034 Heterogeneous nuclear ribonucleoprotein 17.2e-3937.53Show/hide
Query:  GKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +   HF  YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANP----------PP
          KTKKIFVGG+P ++ ++EFR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    + +G QVE+K+A PK ANP            
Subjt:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANP----------PP

Query:  APSKRYHDSRPSYSG-----------GYGDAYGEFGGGGYGGGF---RAGGPYGARGGSYGGYGGYGGSDFSGYGM-------YGTSSIGAYREDPSMGY
           + Y  +  SY G             G+    +G  GYG G+     G  YGA GG  G  GGYG    +GYG        YG+S+  A R       
Subjt:  APSKRYHDSRPSYSG-----------GYGDAYGEFGGGGYGGGF---RAGGPYGARGGSYGGYGGYGGSDFSGYGM-------YGTSSIGAYREDPSMGY

Query:  SARYG-AGFSRGYDLRGGYGGPDESYSTYNSGGAPNT----GGYAGSYDMGIG--AGY-PAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYG
        S+ YG  G+  G     GYG P  +  T +  G  N     GGY+GS D G G  A Y   GGR S  GS   G GG  GG  G GS  +     YG
Subjt:  SARYG-AGFSRGYDLRGGYGGPDESYSTYNSGGAPNT----GGYAGSYDMGIG--AGY-PAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYG

Arabidopsis top hitse value%identityAlignment
AT1G17640.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-5141.11Show/hide
Query:  RASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRTIPKGSSSS---RDFK
        R S    +S GK+FVGG+  ETT+  F N+FG++GE+ DSVIM DR TG+PRGFGFVT+AD +V +KV+E+ H+I+ ++V++KRT+P+G   +      K
Subjt:  RASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRTIPKGSSSS---RDFK

Query:  TKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPA----PSKRYHDS
        T+KIFVGG+P  ++EDE +++F  YG++ EHQIM DH T RSRGFGF+TF+TE +VD L ++G   E    QVEIK+AEPK+     +     +   +D 
Subjt:  TKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPA----PSKRYHDS

Query:  RPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDF-SGYGMYGTSSIGAYREDPSMGYSARYGAGFSRGYDLRGGYGGPDESYSTYN
          SYSG   + Y  +   GYGG              YGGYG Y G+   +  G YG                  YG G+  GY    GYGG   +   Y 
Subjt:  RPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDF-SGYGMYGTSSIGAYREDPSMGYSARYGAGFSRGYDLRGGYGGPDESYSTYN

Query:  SGGAPNTG-GYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPY
        +GG  + G GY      G+ A    GG  S      G   G G G +G+G     RYHPY
Subjt:  SGGAPNTG-GYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPY

AT3G13224.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.4e-6866.67Show/hide
Query:  SRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRTIPKGS--SSSR
        SR+D    GDGAS GKIF+GGL ++TT+  F  HFG+YGEITDSVIM+DR TG PRGFGF+T+ADPSVVDKVIED+H+INGKQVEIKRTIPKG+  + S+
Subjt:  SRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKK
        D KTKKIFVGGIP++V EDE +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VDELL+ GN ++ A +QV + K
Subjt:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKK

AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.9e-8254.59Show/hide
Query:  SRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRTIPKGS--SSSR
        SR+D    GDGAS GKIF+GGL ++TT+  F  HFG+YGEITDSVIM+DR TG PRGFGF+T+ADPSVVDKVIED+H+INGKQVEIKRTIPKG+  + S+
Subjt:  SRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSR
        D KTKKIFVGGIP++V EDE +DFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VDELL+ GN ++ A +QVEIKKAEPKK+     PS   H   
Subjt:  DFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPAPSKRYHDSR

Query:  PSYSGGYGDAYGEFGG--GGYG---GGFRA-GGPYGARGGSYG-GYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSAR---YGAGF-SRGYDLRGGYGG
         S +  Y    G +GG  GGYG   G  R+ GGP     G YG G G  G     GY  YG  S+G YR +P +GYS+R   YG+GF   GY  RGG G 
Subjt:  PSYSGGYGDAYGEFGG--GGYG---GGFRA-GGPYGARGGSYG-GYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSAR---YGAGF-SRGYDLRGGYGG

Query:  PDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR
           +Y  Y  GG    GGY G    G G  Y +GG G   GS  G GG  G GY     + + RYHPY R
Subjt:  PDESYSTYNSGGAPNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGR

AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.1e-4037.53Show/hide
Query:  GKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +   HF  YGE++ +++M+D+ TG PRGFGFV ++DPSV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHIINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANP----------PP
          KTKKIFVGG+P ++ ++EFR +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    + +G QVE+K+A PK ANP            
Subjt:  --KTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANP----------PP

Query:  APSKRYHDSRPSYSG-----------GYGDAYGEFGGGGYGGGF---RAGGPYGARGGSYGGYGGYGGSDFSGYGM-------YGTSSIGAYREDPSMGY
           + Y  +  SY G             G+    +G  GYG G+     G  YGA GG  G  GGYG    +GYG        YG+S+  A R       
Subjt:  APSKRYHDSRPSYSG-----------GYGDAYGEFGGGGYGGGF---RAGGPYGARGGSYGGYGGYGGSDFSGYGM-------YGTSSIGAYREDPSMGY

Query:  SARYG-AGFSRGYDLRGGYGGPDESYSTYNSGGAPNT----GGYAGSYDMGIG--AGY-PAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYG
        S+ YG  G+  G     GYG P  +  T +  G  N     GGY+GS D G G  A Y   GGR S  GS   G GG  GG  G GS  +     YG
Subjt:  SARYG-AGFSRGYDLRGGYGGPDESYSTYNSGGAPNT----GGYAGSYDMGIG--AGY-PAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYG

AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-10658.74Show/hide
Query:  MDSKVNDGVTNGEHDDPKTSNH-EDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI
        MD    + V   E  DPK S   EDD  +    S G   SAGKIFVGGL RETTSA+F+ HFG+YGEITDSVIMKDRKTG PRGFGFVTYAD SVVDKVI
Subjt:  MDSKVNDGVTNGEHDDPKTSNH-EDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVI

Query:  EDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQ
        +D+HII GKQVEIKRTIP+GS SS DFKTKKIFVGGIP+SVD+DEF++FFMQ+GE++EHQIMRDHST RSRGFGF+T+E+E  VD LLA GNR+E +G+Q
Subjt:  EDSHIINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQ

Query:  VEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGY---GGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYG-TSSIGAYREDPSMGYSA
        VEIKKAEPKK N    PSKR+ DSR ++ GGYGD YG   GGGY   GG +++GG YG  GG  GGYGGYGG +F GYG  G    +G YR +P++GYS 
Subjt:  VEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGY---GGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYG-TSSIGAYREDPSMGYSA

Query:  RY---GAGFSR-GYDL---------------------RGGYGGPDESY---------STYNSG-GAPNTGGY--AGSYDMGIGAGYPAGGRGSIYGSRGG
        RY   G G++R GY +                      GGYGGP  SY           Y  G G    GGY   G YDMG   G  AGG G+  G  GG
Subjt:  RY---GAGFSR-GYDL---------------------RGGYGGPDESY---------STYNSG-GAPNTGGY--AGSYDMGIGAGYPAGGRGSIYGSRGG

Query:  ----GGGGGGGGYDGAGSTPTGRYHPYGR
            GGGGG GGY G GS   GRYHPYGR
Subjt:  ----GGGGGGGGYDGAGSTPTGRYHPYGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAAAACTCCATGGATTCCAAGGTAAATGATGGTGTTACTAATGGTGAACACGACGACCCCAAGACCTCGAACCATGAAGACGATGGGAGTAGACATGACCGTGC
CTCTCATGGCGATGGGGCCAGTGCTGGGAAAATCTTCGTTGGAGGTTTACCGAGGGAAACAACTTCCGCACAATTTGTTAATCATTTCGGTGAATATGGAGAAATTACGG
ACTCCGTTATAATGAAGGACCGGAAGACTGGTCATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCCCTCTGTGGTAGATAAAGTCATTGAGGACTCACATATTATT
AATGGGAAACAAGTGGAAATCAAGCGAACAATACCCAAAGGTTCTTCTAGTTCTCGAGATTTCAAGACCAAGAAGATTTTTGTTGGTGGAATTCCGACATCTGTAGACGA
AGATGAGTTCAGGGATTTTTTTATGCAATACGGCGAGGTTCAGGAACACCAGATTATGCGTGACCACTCCACTAGTCGGTCTCGTGGGTTTGGTTTCATTACATTTGAGA
CAGAGCAAGCAGTTGATGAACTCTTGGCAAACGGAAACAGGCTTGAGTTTGCCGGCAGTCAGGTGGAGATCAAGAAGGCTGAGCCGAAAAAGGCAAATCCACCTCCCGCC
CCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGGCTATGGTGATGCATATGGGGAGTTTGGAGGTGGCGGGTATGGTGGTGGTTTTAGGGCAGGTGGACC
ATACGGTGCTAGAGGTGGTAGCTATGGTGGATATGGTGGATATGGTGGAAGTGATTTTAGTGGCTATGGAATGTATGGTACTAGTAGCATTGGAGCATACAGGGAAGACC
CTTCTATGGGGTATTCAGCTCGTTATGGAGCTGGCTTTAGCAGAGGTTATGATTTGAGAGGCGGTTATGGTGGACCTGACGAGAGCTATAGCACGTATAACAGCGGTGGT
GCTCCTAATACTGGTGGGTATGCAGGTAGCTACGATATGGGCATTGGCGCTGGATACCCGGCAGGTGGTAGAGGCTCGATCTATGGAAGTAGAGGAGGAGGCGGAGGAGG
AGGAGGAGGAGGATACGATGGTGCAGGGAGTACTCCAACTGGTCGTTATCATCCTTATGGACGGACCACAATTTTCAAAGATTTAGAATATGACTCGACTGACCTTTGTC
ACTTCTTTTATAAAGCCAAGAATCAAAGTGGAGGGATGCTTTTCAAGACTATTCATCATAATGATCATACCCGAATGGAGATCAACGACAGCGTTATGAACAAGGAGTTT
GGACATTGCATTTTCAATTCTAGAATATGTCTGTTGGCCTTTGTTTTGCAGGCTGTTCGAGATTTCAGCCTAACATTATCTTCTTGGCCTATAATAATAATCCACCTAAT
AGGTCGAATTCTAGAAGAGAGTGGGTGGGGAGCGTACAAGATCCAAATTTCTGACTACTCGATCAAGAATATGTTGAATACATATCCTAACCATAGGTCGAAGTCGAAGT
AA
mRNA sequenceShow/hide mRNA sequence
GGCGAATTGCGAATTCTAGGGTTTAAGGGCGCCATTTTTCCGTTCTCGGCGCTGCGAAACCAGCGAGCATCAACACATGTCTTCTAGGGCTTAGTCATTTTTCTTGTTCA
TTTCTCTTAATCCTCCCTCTCTTCAAGCTCCTCTGTTCCATTAATGTCGGAAAACTCCATGGATTCCAAGGTAAATGATGGTGTTACTAATGGTGAACACGACGACCCCA
AGACCTCGAACCATGAAGACGATGGGAGTAGACATGACCGTGCCTCTCATGGCGATGGGGCCAGTGCTGGGAAAATCTTCGTTGGAGGTTTACCGAGGGAAACAACTTCC
GCACAATTTGTTAATCATTTCGGTGAATATGGAGAAATTACGGACTCCGTTATAATGAAGGACCGGAAGACTGGTCATCCCCGCGGATTCGGGTTTGTGACTTATGCTGA
TCCCTCTGTGGTAGATAAAGTCATTGAGGACTCACATATTATTAATGGGAAACAAGTGGAAATCAAGCGAACAATACCCAAAGGTTCTTCTAGTTCTCGAGATTTCAAGA
CCAAGAAGATTTTTGTTGGTGGAATTCCGACATCTGTAGACGAAGATGAGTTCAGGGATTTTTTTATGCAATACGGCGAGGTTCAGGAACACCAGATTATGCGTGACCAC
TCCACTAGTCGGTCTCGTGGGTTTGGTTTCATTACATTTGAGACAGAGCAAGCAGTTGATGAACTCTTGGCAAACGGAAACAGGCTTGAGTTTGCCGGCAGTCAGGTGGA
GATCAAGAAGGCTGAGCCGAAAAAGGCAAATCCACCTCCCGCCCCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGGCTATGGTGATGCATATGGGGAGT
TTGGAGGTGGCGGGTATGGTGGTGGTTTTAGGGCAGGTGGACCATACGGTGCTAGAGGTGGTAGCTATGGTGGATATGGTGGATATGGTGGAAGTGATTTTAGTGGCTAT
GGAATGTATGGTACTAGTAGCATTGGAGCATACAGGGAAGACCCTTCTATGGGGTATTCAGCTCGTTATGGAGCTGGCTTTAGCAGAGGTTATGATTTGAGAGGCGGTTA
TGGTGGACCTGACGAGAGCTATAGCACGTATAACAGCGGTGGTGCTCCTAATACTGGTGGGTATGCAGGTAGCTACGATATGGGCATTGGCGCTGGATACCCGGCAGGTG
GTAGAGGCTCGATCTATGGAAGTAGAGGAGGAGGCGGAGGAGGAGGAGGAGGAGGATACGATGGTGCAGGGAGTACTCCAACTGGTCGTTATCATCCTTATGGACGGACC
ACAATTTTCAAAGATTTAGAATATGACTCGACTGACCTTTGTCACTTCTTTTATAAAGCCAAGAATCAAAGTGGAGGGATGCTTTTCAAGACTATTCATCATAATGATCA
TACCCGAATGGAGATCAACGACAGCGTTATGAACAAGGAGTTTGGACATTGCATTTTCAATTCTAGAATATGTCTGTTGGCCTTTGTTTTGCAGGCTGTTCGAGATTTCA
GCCTAACATTATCTTCTTGGCCTATAATAATAATCCACCTAATAGGTCGAATTCTAGAAGAGAGTGGGTGGGGAGCGTACAAGATCCAAATTTCTGACTACTCGATCAAG
AATATGTTGAATACATATCCTAACCATAGGTCGAAGTCGAAGTAA
Protein sequenceShow/hide protein sequence
MSENSMDSKVNDGVTNGEHDDPKTSNHEDDGSRHDRASHGDGASAGKIFVGGLPRETTSAQFVNHFGEYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDSHII
NGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFRDFFMQYGEVQEHQIMRDHSTSRSRGFGFITFETEQAVDELLANGNRLEFAGSQVEIKKAEPKKANPPPA
PSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYGGYGGYGGSDFSGYGMYGTSSIGAYREDPSMGYSARYGAGFSRGYDLRGGYGGPDESYSTYNSGG
APNTGGYAGSYDMGIGAGYPAGGRGSIYGSRGGGGGGGGGGYDGAGSTPTGRYHPYGRTTIFKDLEYDSTDLCHFFYKAKNQSGGMLFKTIHHNDHTRMEINDSVMNKEF
GHCIFNSRICLLAFVLQAVRDFSLTLSSWPIIIIHLIGRILEESGWGAYKIQISDYSIKNMLNTYPNHRSKSK